SIAE (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 115,782,624 - 115,822,707 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 115,782,964 - 115,820,284 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 10,296,759 - 10,334,554 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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SIAE (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 124,633,113 - 124,676,303 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 124,633,113 - 124,695,707 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 124,503,009 - 124,546,199 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 124,010,903 - 124,048,927 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 121,665,869 - 121,703,894 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q24.2 | NCBI | | | | | HuRef | 11 | 120,448,144 - 120,488,613 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 124,391,816 - 124,432,334 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 124,661,771 - 124,704,961 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Siae (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 37,525,117 - 37,559,554 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 37,466,994 - 37,560,951 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 37,613,821 - 37,648,258 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 37,555,698 - 37,649,655 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 37,421,432 - 37,455,903 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 37,363,518 - 37,397,989 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 34,830,942 - 34,865,371 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | A4 | NCBI | | | | | cM Map | 9 | 20.79 | NCBI | | | | |
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Siae (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 45,507,465 - 45,542,740 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 37,318,724 - 37,354,004 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 37,318,747 - 37,353,996 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 41,335,011 - 41,370,367 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 39,618,074 - 39,653,431 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 37,480,954 - 37,516,313 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 40,078,269 - 40,113,514 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 40,078,269 - 40,113,514 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 40,079,093 - 40,114,338 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 38,854,154 - 38,889,452 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 38,862,919 - 38,896,428 (+) | NCBI | | | | | Celera | 8 | 37,101,383 - 37,136,604 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q22 | NCBI | | | | |
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Siae (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955412 | 25,703,591 - 25,792,252 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955412 | 25,704,024 - 25,741,646 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SIAE (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 125,331,987 - 125,371,605 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 126,436,869 - 126,476,476 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 119,463,554 - 119,503,192 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 123,378,866 - 123,416,935 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 123,378,866 - 123,416,935 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SIAE (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 9,719,444 - 9,770,574 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 9,731,394 - 9,769,227 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 9,764,289 - 9,815,399 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 9,659,068 - 9,710,228 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 9,621,463 - 9,754,225 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 9,731,219 - 9,782,258 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 9,701,662 - 9,752,761 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 9,750,359 - 9,789,276 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Siae (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 106,860,332 - 106,894,503 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936743 | 1,109,211 - 1,142,807 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936743 | 1,105,461 - 1,142,028 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SIAE (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 51,879,224 - 51,918,827 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 51,879,220 - 51,918,974 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 57,397,132 - 57,436,360 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Siae (Heterocephalus glaber - naked mole-rat) |
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