GPAM (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 9 | 105,049,954 - 105,083,750 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 105,049,711 - 105,113,374 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 66,253,108 - 66,316,689 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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GPAM (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 10 | 112,149,865 - 112,227,677 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 112,149,865 - 112,215,377 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 113,909,623 - 113,943,523 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 113,899,612 - 113,933,508 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 113,899,611 - 113,933,508 | NCBI | | | | | Celera | 10 | 107,637,183 - 107,671,081 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | q25.2 | NCBI | | | | | HuRef | 10 | 107,537,900 - 107,571,823 (-) | NCBI | | HuRef | | | CHM1_1 | 10 | 114,191,437 - 114,225,332 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 113,040,886 - 113,118,691 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gpam (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 19 | 55,056,067 - 55,115,666 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 55,055,700 - 55,115,670 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 55,067,635 - 55,127,319 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 55,067,268 - 55,127,238 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 55,144,224 - 55,173,937 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 55,122,984 - 55,152,703 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 57,260,690 - 57,290,402 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | D2 | NCBI | | | | | cM Map | 19 | 50.81 | NCBI | | | | |
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Gpam (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 264,111,599 - 264,176,112 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 254,106,323 - 254,170,755 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 254,106,331 - 254,142,639 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 262,315,818 - 262,376,481 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 269,021,904 - 269,082,569 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 261,664,129 - 261,730,618 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 275,843,823 - 275,906,880 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 275,846,819 - 275,906,686 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 283,246,186 - 283,309,245 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 261,370,264 - 261,431,434 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 261,581,308 - 261,642,479 (-) | NCBI | | | | | Celera | 1 | 249,818,009 - 249,877,839 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q55 | NCBI | | | | |
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Gpam (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955431 | 17,291,270 - 17,363,714 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955431 | 17,291,890 - 17,363,611 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GPAM (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 8 | 124,031,551 - 124,065,468 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 124,036,887 - 124,070,804 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 108,747,370 - 108,781,270 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 112,186,744 - 112,246,549 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 112,186,744 - 112,246,549 (-) | Ensembl | panpan1.1 | | panPan2 | |
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GPAM (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 28 | 23,261,673 - 23,323,985 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 28 | 23,258,428 - 23,298,017 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 23,413,452 - 23,450,047 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 23,793,834 - 23,830,470 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 23,793,834 - 23,830,650 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 28 | 23,351,250 - 23,387,551 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 23,362,221 - 23,398,810 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 23,557,678 - 23,594,318 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Gpam (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 22,737,594 - 22,806,520 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936486 | 2,754,751 - 2,823,665 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936486 | 2,754,753 - 2,823,600 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GPAM (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 122,538,491 - 122,579,436 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 122,538,600 - 122,582,390 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 133,473,315 - 133,545,241 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Gpam (Heterocephalus glaber - naked mole-rat) |
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