TRDN (Chlorocebus sabaeus - green monkey) |
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TRDN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 123,216,339 - 123,636,950 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 123,216,339 - 123,637,189 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 123,537,484 - 123,958,095 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 123,579,182 - 123,999,641 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 123,580,714 - 123,999,641 | NCBI | | | | | Celera | 6 | 124,281,651 - 124,701,991 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q22.31 | NCBI | | | | | HuRef | 6 | 121,115,183 - 121,535,579 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 123,801,225 - 124,221,793 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 124,404,293 - 124,824,746 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Trdn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 32,959,479 - 33,352,705 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 32,956,550 - 33,352,705 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 33,083,483 - 33,476,709 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 33,080,554 - 33,476,709 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 32,803,289 - 33,196,515 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 32,772,897 - 32,923,408 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 33,991,863 - 34,385,108 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | A4 | NCBI | | | | | cM Map | 10 | 18.37 | NCBI | | | | |
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Trdn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 25,774,765 - 26,230,069 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 23,955,651 - 24,410,494 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 23,955,651 - 24,410,595 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 23,712,731 - 24,162,882 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 29,712,475 - 30,162,651 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 23,909,818 - 24,359,973 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 25,403,390 - 25,787,664 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 25,403,390 - 25,839,345 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 26,865,461 - 27,248,423 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 24,514,752 - 24,925,948 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 24,517,697 - 24,980,460 (-) | NCBI | | | | | Celera | 1 | 22,661,681 - 23,059,882 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p12-p11 | NCBI | | | | |
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Trdn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955436 | 4,963,945 - 5,266,727 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRDN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 143,213,514 - 143,630,282 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 141,115,209 - 141,534,159 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 121,010,234 - 121,424,644 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 125,133,827 - 125,546,854 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 125,134,433 - 125,546,537 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TRDN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 1 | 62,402,763 - 62,762,717 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 62,402,642 - 62,762,722 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 63,211,629 - 63,571,581 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 62,604,717 - 62,967,214 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 62,606,830 - 62,967,138 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 1 | 62,540,244 - 62,899,794 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 62,328,116 - 62,688,183 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 62,976,846 - 63,337,432 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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LOC101962457 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TRDN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 39,180,913 - 39,567,240 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 39,180,544 - 39,567,245 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 43,518,886 - 43,723,161 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Trdn (Heterocephalus glaber - naked mole-rat) |
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