LOC103243501 (keratin, type I cytoskeletal 24) - Rat Genome Database

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Gene: LOC103243501 (keratin, type I cytoskeletal 24) Chlorocebus sabaeus
Analyze
Symbol: LOC103243501 (Ensembl: KRT24)
Name: keratin, type I cytoskeletal 24 (Ensembl:keratin 24)
RGD ID: 18573217
Description: ENCODES a protein that exhibits structural molecule activity (inferred); INVOLVED IN epithelial cell differentiation (inferred); intermediate filament organization (inferred); FOUND IN cytoskeleton (inferred); intermediate filament (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: keratin 24; KRT24
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11665,480,506 - 65,486,441 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1665,480,742 - 65,486,197 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607736,362,480 - 36,368,211 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium
Low 12
Below cutoff 8 5 26

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008012772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCSAT00000000832   ⟹   ENSCSAP00000015232
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1665,480,742 - 65,486,197 (+)Ensembl
RefSeq Acc Id: XM_008012772   ⟹   XP_008010963
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11665,480,506 - 65,486,441 (+)NCBI
Vero_WHO_p1.0NW_02366607736,362,480 - 36,368,211 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008010963 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000015232.1
Reference Protein Sequences
RefSeq Acc Id: XP_008010963   ⟸   XM_008012772
- UniProtKB: A0A0D9S2Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000015232   ⟸   ENSCSAT00000000832


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000002815 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000000832.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.170 UniProtKB/TrEMBL
  Single helix bin UniProtKB/TrEMBL
  Vasodilator-stimulated phosphoprotein UniProtKB/TrEMBL
InterPro IF_rod_dom UniProtKB/TrEMBL
  Keratin_I UniProtKB/TrEMBL
KEGG Report csab:103243501 UniProtKB/TrEMBL
NCBI Gene KRT24 ENTREZGENE
PANTHER KERATIN, TYPE I CYTOSKELETAL 24 UniProtKB/TrEMBL
  PTHR23239 UniProtKB/TrEMBL
Pfam Filament UniProtKB/TrEMBL
PRINTS TYPE1KERATIN UniProtKB/TrEMBL
PROSITE IF_ROD_2 UniProtKB/TrEMBL
SMART Filament UniProtKB/TrEMBL
Superfamily-SCOP Intermediate filament protein, coiled coil region UniProtKB/TrEMBL
  Prefoldin UniProtKB/TrEMBL
UniProt A0A0D9S2Z3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103243501  keratin, type I cytoskeletal 24  KRT24  keratin 24  Symbol and/or name change 5135510 APPROVED