MYO18A (myosin XVIIIA) - Rat Genome Database

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Gene: MYO18A (myosin XVIIIA) Chlorocebus sabaeus
Analyze
Symbol: MYO18A
Name: myosin XVIIIA
RGD ID: 18565017
Description: ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN actomyosin structure organization (ortholog); asymmetric Golgi ribbon formation (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hydrops Fetalis (ortholog); prostate cancer (ortholog); FOUND IN actomyosin (ortholog); brush border (ortholog); cytoskeleton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC103242644; uncharacterized protein DDB_G0271670-like; unconventional myosin-XVIIIa
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11622,836,856 - 22,942,366 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660757,163,834 - 7,269,590 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
MYO18A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11622,836,856 - 22,942,366 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660757,163,834 - 7,269,590 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
MYO18A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381729,071,122 - 29,180,398 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1729,071,122 - 29,180,398 (-)EnsemblGRCh38hg38GRCh38
GRCh371727,398,140 - 27,507,416 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361724,424,654 - 24,531,533 (-)NCBINCBI36Build 36hg18NCBI36
Build 341724,424,664 - 24,426,753NCBI
Celera1724,259,886 - 24,366,927 (-)NCBICelera
Cytogenetic Map17q11.2NCBI
HuRef1723,608,764 - 23,715,901 (-)NCBIHuRef
CHM1_11727,463,017 - 27,569,879 (-)NCBICHM1_1
T2T-CHM13v2.01730,013,842 - 30,123,093 (-)NCBIT2T-CHM13v2.0
Myo18a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,654,066 - 77,756,806 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1177,654,072 - 77,756,806 (+)EnsemblGRCm39 Ensembl
GRCm381177,763,240 - 77,865,988 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1177,763,246 - 77,865,980 (+)EnsemblGRCm38mm10GRCm38
MGSCv371177,590,767 - 77,679,482 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361177,593,460 - 77,682,175 (+)NCBIMGSCv36mm8
Celera1185,276,608 - 85,365,361 (+)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
Myo18a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81063,152,303 - 63,253,543 (+)NCBIGRCr8
mRatBN7.21062,654,218 - 62,755,465 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1062,654,281 - 62,755,468 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1067,286,116 - 67,386,748 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01066,791,627 - 66,892,122 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01062,261,757 - 62,362,375 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01064,979,770 - 65,080,535 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1064,979,770 - 65,080,535 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01066,545,745 - 66,646,100 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41063,818,690 - 63,906,414 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1061,634,525 - 61,734,518 (+)NCBICelera
Cytogenetic Map10q24NCBI
Myo18a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554814,028,706 - 4,113,878 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554814,020,274 - 4,115,014 (+)NCBIChiLan1.0ChiLan1.0
MYO18A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21935,247,597 - 35,384,086 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11737,128,726 - 37,265,227 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01727,593,787 - 27,700,801 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11728,116,279 - 28,208,301 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1728,116,279 - 28,208,301 (+)Ensemblpanpan1.1panPan2
MYO18A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1943,226,170 - 43,325,026 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl943,227,187 - 43,322,545 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha942,381,105 - 42,479,871 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0944,043,174 - 44,141,965 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl944,043,182 - 44,142,168 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1942,826,664 - 42,925,410 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0943,119,129 - 43,217,629 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0943,197,914 - 43,296,683 (-)NCBIUU_Cfam_GSD_1.0
Myo18a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560242,379,220 - 42,473,940 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365385,257,165 - 5,351,757 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
Myo18a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247861,629,949 - 1,715,031 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247861,626,555 - 1,726,204 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008010859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008010877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037992637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_008010867   ⟹   XP_008009058
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11622,837,876 - 22,942,366 (-)NCBI
Vero_WHO_p1.0NW_0236660757,163,834 - 7,269,588 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008010869   ⟹   XP_008009060
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11622,837,876 - 22,942,366 (-)NCBI
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008010871   ⟹   XP_008009062
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11622,837,876 - 22,942,366 (-)NCBI
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008010873   ⟹   XP_008009064
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11622,837,876 - 22,942,366 (-)NCBI
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
Sequence:
RefSeq Acc Id: XM_037992624   ⟹   XP_037848552
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,165,712 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992625   ⟹   XP_037848553
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992626   ⟹   XP_037848554
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992627   ⟹   XP_037848555
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992628   ⟹   XP_037848556
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992629   ⟹   XP_037848557
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,177,352 - 7,269,588 (+)NCBI
RefSeq Acc Id: XM_037992630   ⟹   XP_037848558
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,177,352 - 7,269,588 (+)NCBI
RefSeq Acc Id: XM_037992631   ⟹   XP_037848559
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,177,352 - 7,269,588 (+)NCBI
RefSeq Acc Id: XM_037992632   ⟹   XP_037848560
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,163,835 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992633   ⟹   XP_037848561
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,177,352 - 7,269,588 (+)NCBI
RefSeq Acc Id: XM_037992634   ⟹   XP_037848562
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,212,634 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992636   ⟹   XP_037848564
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,212,609 - 7,269,590 (+)NCBI
RefSeq Acc Id: XM_037992637   ⟹   XP_037848565
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660757,203,697 - 7,269,590 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_008009064   ⟸   XM_008010873
- Peptide Label: isoform X8
RefSeq Acc Id: XP_008009062   ⟸   XM_008010871
- Peptide Label: isoform X7
RefSeq Acc Id: XP_008009060   ⟸   XM_008010869
- Peptide Label: isoform X4
RefSeq Acc Id: XP_008009058   ⟸   XM_008010867
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037848555   ⟸   XM_037992627
- Peptide Label: isoform X5
RefSeq Acc Id: XP_037848560   ⟸   XM_037992632
- Peptide Label: isoform X12
RefSeq Acc Id: XP_037848553   ⟸   XM_037992625
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037848556   ⟸   XM_037992628
- Peptide Label: isoform X6
RefSeq Acc Id: XP_037848554   ⟸   XM_037992626
- Peptide Label: isoform X3
RefSeq Acc Id: XP_037848552   ⟸   XM_037992624
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037848557   ⟸   XM_037992629
- Peptide Label: isoform X9
RefSeq Acc Id: XP_037848559   ⟸   XM_037992631
- Peptide Label: isoform X11
RefSeq Acc Id: XP_037848558   ⟸   XM_037992630
- Peptide Label: isoform X10
RefSeq Acc Id: XP_037848561   ⟸   XM_037992633
- Peptide Label: isoform X13
RefSeq Acc Id: XP_037848565   ⟸   XM_037992637
- Peptide Label: isoform X16
RefSeq Acc Id: XP_037848564   ⟸   XM_037992636
- Peptide Label: isoform X15
RefSeq Acc Id: XP_037848562   ⟸   XM_037992634
- Peptide Label: isoform X14


Additional Information

Database Acc Id Source(s)
NCBI Gene MYO18A ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-03 MYO18A  myosin XVIIIA  LOC103242644  uncharacterized protein DDB_G0271670-like  Data merged from RGD:18491935 737654 PROVISIONAL