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Gene: NCAPH (non-SMC condensin I complex subunit H) Chlorocebus sabaeus

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Symbol:

NCAPH

Name:

non-SMC condensin I complex subunit H

RGD ID:

18560240

Description:

ENCODES a protein that exhibits chromatin binding (inferred); INVOLVED IN female meiosis chromosome separation (ortholog); female meiotic nuclear division (ortholog); meiotic chromosome condensation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); fundus dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

condensin complex subunit 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	755,840 - 792,053 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	755,897 - 792,154 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	168,182,504 - 168,218,685 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

fundus dystrophy (ISO)

hepatocellular carcinoma (ISO)

intellectual disability (ISO)

lung non-small cell carcinoma (ISO)

primary autosomal recessive microcephaly 23 (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell division (IEA)

chromosome condensation (IEA)

female meiosis chromosome separation (ISO)

female meiotic nuclear division (ISO)

meiotic chromosome condensation (ISO)

meiotic chromosome segregation (ISO)

mitotic chromosome condensation (IEA)

positive regulation of chromosome condensation (IEA)

positive regulation of chromosome segregation (ISO)

positive regulation of chromosome separation (ISO)

Cellular Component

chromosome (IEA,ISO)

condensed nuclear chromosome (ISO)

condensin complex (IEA)

cytoplasm (IEA)

cytosol (IEA)

nucleoplasm (IEA)

nucleus (ISO)

Molecular Function

chromatin binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

NCAPH
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	755,840 - 792,053 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	755,897 - 792,154 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	168,182,504 - 168,218,685 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

NCAPH
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	96,335,766 - 96,377,091 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	96,335,766 - 96,377,091 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	97,001,504 - 97,042,829 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	96,365,211 - 96,405,001 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	96,423,364 - 96,461,456	NCBI
Celera	2	91,442,671 - 91,482,461 (+)	NCBI		Celera
Cytogenetic Map	2	q11.2	NCBI
HuRef	2	90,962,712 - 91,004,067 (+)	NCBI		HuRef
CHM1_1	2	97,005,816 - 97,047,166 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	96,842,375 - 96,883,701 (+)	NCBI		T2T-CHM13v2.0

Ncaph
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	126,945,729 - 126,975,857 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	126,945,729 - 126,975,874 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	127,103,809 - 127,133,954 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	127,103,809 - 127,133,954 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	126,929,545 - 126,959,690 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	126,795,270 - 126,825,346 (-)	NCBI		MGSCv36	mm8
Celera	2	128,333,925 - 128,367,247 (-)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI
cM Map	2	61.76	NCBI

Ncaph
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	134,825,271 - 134,852,502 (-)	NCBI		GRCr8
mRatBN7.2	3	114,371,937 - 114,399,178 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	114,371,941 - 114,399,180 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	118,263,906 - 118,290,791 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	126,859,455 - 126,886,339 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	124,519,832 - 124,546,720 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	119,583,798 - 119,611,148 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	119,583,648 - 119,611,136 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	126,108,995 - 126,136,392 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	114,651,251 - 114,679,447 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	113,212,390 - 113,239,664 (-)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

Ncaph
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	3,878,883 - 3,909,146 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955470	3,878,896 - 3,909,087 (+)	NCBI	ChiLan1.0	ChiLan1.0

NCAPH
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	31,932,502 - 31,973,179 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	31,931,343 - 31,975,997 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	102,939,357 - 102,980,091 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	97,258,412 - 97,299,912 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	97,258,412 - 97,299,906 (+)	Ensembl	panpan1.1		panPan2

NCAPH
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	34,428,886 - 34,463,140 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	34,420,060 - 34,462,666 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	34,199,697 - 34,233,619 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	35,190,883 - 35,234,717 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	35,199,736 - 35,234,715 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	34,324,093 - 34,363,755 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	34,377,182 - 34,422,599 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	34,595,536 - 34,638,901 (+)	NCBI		UU_Cfam_GSD_1.0

Ncaph
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	83,172,516 - 83,216,031 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936744	440,956 - 468,972 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936744	440,958 - 468,964 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NCAPH
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	46,852,392 - 46,893,013 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	46,852,388 - 46,893,008 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	48,999,151 - 49,092,637 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Ncaph
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	2,411,970 - 2,444,446 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624749	2,411,952 - 2,439,981 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in NCAPH
1005 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008007972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000015455 ⟹ ENSCSAP00000013396

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	14	755,897 - 792,154 (+)	Ensembl

RefSeq Acc Id:

XM_008007972 ⟹ XP_008006163

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	755,905 - 792,053 (+)	NCBI
Vero_WHO_p1.0	NW_023666041	168,182,531 - 168,218,685 (+)	NCBI

Sequence:

show sequence

CAGCTCAGGCGACGCCAAAGCAGGATGGGACCTCCCGGCCCAGGTGAGGCCGGGCCGTCGGGAG
GCGCGGCGGGAAGGGCCCCGAGCGAAGCAGTACTTCGGGCGGCACTGCCAGCCACAATGAATAA
CTCTTCTTTGGAGACCCGAGGACAACCCCACAGTGCCTCCTCCTCTTCAGAGCGGGTGTTCCCG
ATGCCCCTGCCCAGGAAGGCGCCTCTCAATATTCCCGGCACCCCAGTCCTCGAAGACTTTCCTC
AGAATGACGATGAGAAGGAGCGGCTGCAGCGGAGGCGGTCGAGGGTCTTTGATCTGCAGTTCAG
CACCGACTCGCCTCGCTTGTTGGCCTCCCCCTCCAGCAGGATTATTGATGTTTCAGCTACTATG
CCTAAGTTTACAAACACGCAGATTACGGAACATTACTCCACCTGTATCAAACTGTCCACTGAAA
ATAAAATCACTACCAAGAATGCTTTTGGTTTGCACTTGATTGATTTTATGTCAGAGATTCTTAA
ACAGAAAGACACCGAACCAACCAACTTTAAAGTGGCTGCAGGCACTCTGGATGCCAGCACTAAG
ATCTATGCGGTACGTGTGGACGCCGTCCATGCCGACGTATACAGAGTCCTTGGGGGCCTGGGCA
AAGATGCACCGTCTTTGGAAGAAGTGGAAGGCCATGTTGCAGATGGAAGTGCTACTGAAATGGG
AACAACCAAAAAGGCTCCAAAGCCAAAGAAGAAGCTCTTACACAGAACCATCGAGCAGAACATA
AACAACCTCAATGTCTCCGAAGCAGATCGGAAGTGTGAGATTGATCCCATGTTTCAGAAGACGG
CAGCCTCGTTTGATGAGTGCAGCACAGCGGGGGTGTTTCTGTCCACGCTCCACTGCCAGGACTA
CAGAAGTGAGCTGCTGTTCCCCTCTGATGTCCAGACACTCTCCACGGGAGAACCTCTCGAGTTG
CCAGAGTTAGGTTGGGTAGAAATGACAGATTTAAAAGCGCCCTTGCAGCAGTGTGCGGAAGATC
GCCAGATCTGCCCTTCCCTGGCCGGGTTCCAGTTTACTCAGTGGGACAGTGAAACACATAATGA
GTCTGTGTCGGCCCTGGTAGACAAGTTTAAGAAGAATGACCAGGTGTTTGACATCAACGCTGAA
GTTGAGAGTGACTGCGGAGACGTCCCTGATGGGTCCCTGGGGGATGACTTTGATGCCAACGATG
AACCCGACCGCACTGCAGTTGGGGATCATGAAGAGTTCAGGAGCTGGAAGGAGCCCTGCCAGGT
TCAGAGCTGCCAGGAAGAAATGATTTCCCTCGGGGATGGAGACGTCAGGACCATGTGCCCCCTT
CTGTCTATGAAACCTGGAGAATATTCTTATTTCAGTCCTCGGACCATGTCGATGTGGGCTGGCC
CGGATCACTGGCGCTTTAGGCCTCGACGCAAACAAGATGCTCCCTCCCAATCAGAAAACAGAAA
GAAGAGTACAAAGAAAGATTTTGAAATTGACTTTGAAGATGATATTGACTTTGATGTCTATTTT
AGAAAAACAAAGGCTGCTACTATTCTGACCAAGTCCACTTTGGAGAACCAGAACTGGAGAGCTA
CTACCCTTCCTACGGATTTCCACTACGACGTCGACACCCTGGTCCAGCTCCACCTCAAACCAGG
CACCAGATTACTTAAGATGGCCCAGGGCCGAAGGGCAGAGACTGAGCATTATGAAGAAATTGAA
GACTATGATTACAACAACCCTAACGACACCTCCAACTTCTGCCCTGGATTACAGGCTGCCGACA
GTGATGATGAAGATTCTGATGACTTATTTGTGGGACCAGTTGGGAACTCTGACCTCTCACCTTA
TCCTTGCCATCCACCTAAGACAGCACAACAGAATGGTGACACTCCGGAAGCCCAAGGATTAGAC
ATCACAACATATGGGGAGTCAAACCTGGTAGCCGAGCCTCAGAAGGTAAATAAAATTGAAATTC
ACTATGCCAAGACTGCCAAAAAGATGGACATGAAGAAGTTGAAGCAGAGCATGTGGAGTCTGCT
GACAGCGCTCTCCGGAAAGGAGGCAGATGCAGAGGCAAACCACAGGGAAGCTGGAAAAGAAGGG
GCCCTGGCAGAAGTGGCTGACAAGAAGATGCTCAGCGGGCTCACGAAGGACCTGCAGAGAAGCC
TGCCCCCTGTCATGGCTCAGAACCTCTCCATACCTCTGGCTTTTGCCTGTCTCCTACATTTAGC
CAATGAAAAGAATCTAAAGCTGGAAGGAACAGAGGACCTCTCTGACGTTCTTGTGAGGCAAGGA
GATTGAGTTCACTGTGGAGAAGTCAGGAGGCCCGTCACTTACTCAGCTGCCAGGACAGCCCCAG
TCTGGGTGGAAGAAGATGCCATGGGCTTATACCCAGGCTGTAGCCAACTACCAGCGTGCCTGTT
TATTTGTTGCCCTTTCCTTCTCTCCGTCACGGTCTGGGTGCCCGCGCCCTGAAGCTCTGCGCTT
GACTGATTAAACTTTACTGCCCTGTGGTGACCATCTAGGAGAGGGGAGGGCAGAGCGGGTGAGG
GTACTGTTCTGGATCGAGGAAACCTATATCCATTCTTCGTATCAGTGAATAGTTTTAGTCTCCT
AAGTTGATCTGTTGTTTTCCAAACTCTACTCTTGTAGGAAATTTTCCAGTGGGCACTGAATGTT
GCCCTTGAAGAACGTCCTAATCCATGTACATGAAATACACCATATGTACACTTATAAATGTATA
TAGAATGCTCAAAAATAAAATTCTTAATAATATAACTGGCAAAA

hide sequence

RefSeq Acc Id:

XM_008007973 ⟹ XP_008006164

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	755,904 - 792,053 (+)	NCBI
Vero_WHO_p1.0	NW_023666041	168,182,531 - 168,218,683 (+)	NCBI

Sequence:

show sequence

CCAGCTCAGGCGACGCCAAAGCAGGATGGGACCTCCCGGCCCAGGTGAGGCCGGGCCGTCGGGA
GGCGCGGCGGGAAGGGCCCCGAGCGAAGCAGTACTTCGGGCGGCACTGCCAGCCACAATGAATA
ACTCTTCTTTGGAGACCCGAGGACAACCCCACAGTGCCTCCTCCTCTTCAGAGCGGGTGTTCCC
GATGCCCCTGCCCAGGAAGGCGCCTCTCAATATTCCCGGCACCCCAGTCCTCGAAGACTTTCCT
CAGAATGACGATGAGAAGGAGCGGCTGCAGCGGAGGCGGTCGAGGGTCTTTGATCTGCAGTTCA
GCACCGACTCGCCTCGCTTGTTGGCCTCCCCCTCCAGCAGGATTATTGATGTTTCAGCTACTAT
GCCTAAGTTTACAAACACGCAGATTACGGAACATTACTCCACCTGTATCAAACTGTCCACTGAA
AATAAAATCACTACCAAGAATGCTTTTGGTTTGCACTTGATTGATTTTATGTCAGAGATTCTTA
AACAGAAAGACACCGAACCAACCAACTTTAAAGTGGCTGCAGGCACTCTGGATGCCAGCACTAA
GATCTATGCGGTACGTGTGGACGCCGTCCATGCCGACGTATACAGAGTCCTTGGGGGCCTGGGC
AAAGATGCACCGTCTTTGGAAGAAGTGGAAGGCCATGTTGCAGATGGAAGTGCTACTGAAATGG
GAACAACCAAAAAGGCTCCAAAGCCAAAGAAGAAGCTCTTACACAGAACCATCGAGCAGAACAT
AAACAACCTCAATGTCTCCGAAGCAGATCGGAAGTGTGAGATTGATCCCATGTTTCAGAAGACG
GCAGCCTCGTTTGATGAGTGCAGCACAGCGGGGGTGTTTCTGTCCACGCTCCACTGCCAGGACT
ACAGAAGTGAGCTGCTGTTCCCCTCTGATGTCCAGACACTCTCCACGGGAGAACCTCTCGAGTT
GCCAGAGTTAGGTTGGGTAGAAATGACAGATTTAAAAGCGCCCTTGCAGCAGTGTGCGGAAGAT
CGCCAGATCTGCCCTTCCCTGGCCGGGTTCCAGTTTACTCAGTGGGACAGTGAAACACATAATG
AGTCTGTGTCGGCCCTGGTAGACAAGTTTAAGAAGAATGACCAGGTGTTTGACATCAACGCTGA
AGTTGAGAGTGACTGCGGAGACGTCCCTGATGGGTCCCTGGGGGATGACTTTGATGCCAACGAT
GAACCCGACCGCACTGCAGTTGGGGATCATGAAGAGTTCAGGAGCTGGAAGGAGCCCTGCCAGG
TTCAGAGCTGCCAGGAAGAAATGATTTCCCTCGGGGATGGAGACGTCAGGACCATGTGCCCCCT
TCTGTCTATGAAACCTGGAGAATATTCTTATTTCAGTCCTCGGACCATGTCGATGTGGGCTGGC
CCGGATCACTGGCGCTTTAGGCCTCGACGCAAACAAGATGCTCCCTCCCAATCAGAAAACAGAA
AGAAGAGTACAAAGAAAGATTTTGAAATTGACTTTGAAGATGATATTGACTTTGATGTCTATTT
TAGAAAAACAAAGGCTGCTACTATTCTGACCAAGTCCACTTTGGAGAACCAGAACTGGAGAGCT
ACTACCCTTCCTACGGATTTCCACTACGACGTCGACACCCTGGTCCAGCTCCACCTCAAACCAG
GCACCAGATTACTTAAGATGGCCCAGGGCCGAAGGGCAGAGACTGAGCATTATGAAGAAATTGA
AGACTATGATTACAACAACCCTAACGACACCTCCAACTTCTGCCCTGGATTACAGGCTGCCGAC
AGTGATGATGAAGATTCTGATGACTTATTTGTGGGACCAGTTGGGAACTCTGACCTCTCACCTT
ATCCTTGCCATCCACCTAAGACAGCACAACAGAATGGTGACACTCCGGAAGCCCAAGGATTAGA
CATCACAACATATGGGGAGTCAAACCTGGTAGCCGAGCCTCAGAAGGTAAATAAAATTGAAATT
CACTATGCCAAGACTGCCAAAAAGATGGACATGAAGAAGTTGAAGCAGAGCATGTGGAGTCTGC
TGACAGCGCTCTCCGGAAAGGAGGCAGATGCAGAGGCAAACCACAGGGAAGCTGGAAAAGAAGG
GGCCCTGGCAGAAGTGGCTGACAAGAAGATGCTCAGCGGGCTCACGAAGGACCTGCAGAGAAGC
CTGCCCCCTGTCATGGCTCAGAACCTCTCCATACCTCTGGCTTTTGCCTGTCTCCTACATTTAG
CCAATGAAAAGGTAGGTAATTAAGAATCTAAAGCTGGAAGGAACAGAGGACCTCTCTGACGTTC
TTGTGAGGCAAGGAGATTGAGTTCACTGTGGAGAAGTCAGGAGGCCCGTCACTTACTCAGCTGC
CAGGACAGCCCCAGTCTGGGTGGAAGAAGATGCCATGGGCTTATACCCAGGCTGTAGCCAACTA
CCAGCGTGCCTGTTTATTTGTTGCCCTTTCCTTCTCTCCGTCACGGTCTGGGTGCCCGCGCCCT
GAAGCTCTGCGCTTGACTGATTAAACTTTACTGCCCTGTGGTGACCATCTAGGAGAGGGGAGGG
CAGAGCGGGTGAGGGTACTGTTCTGGATCGAGGAAACCTATATCCATTCTTCGTATCAGTGAAT
AGTTTTAGTCTCCTAAGTTGATCTGTTGTTTTCCAAACTCTACTCTTGTAGGAAATTTTCCAGT
GGGCACTGAATGTTGCCCTTGAAGAACGTCCTAATCCATGTACATGAAATACACCATATGTACA
CTTATAAATGTATATAGAATGCTCAAAAATAAAATTCTTAATAATATAACTGGCAAAA

hide sequence

RefSeq Acc Id:

XM_008007974 ⟹ XP_008006165

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	755,840 - 792,053 (+)	NCBI
Vero_WHO_p1.0	NW_023666041	168,182,504 - 168,218,685 (+)	NCBI

Sequence:

show sequence

CGCCCGCCGGTGACGTCACGCGGCCGTTACGACGCTCAGGCGTCTCGACGCGCGCGATTTAAAA
CCAGCTCAGGCGACGCCAAAGCAGGATGGGACCTCCCGGCCCAGCACTGCCAGCCACAATGAAT
AACTCTTCTTTGGAGACCCGAGGACAACCCCACAGTGCCTCCTCCTCTTCAGAGCGGGTGTTCC
CGATGCCCCTGCCCAGGAAGGCGCCTCTCAATATTCCCGGCACCCCAGTCCTCGAAGACTTTCC
TCAGAATGACGATGAGAAGGAGCGGCTGCAGCGGAGGCGGTCGAGGGTCTTTGATCTGCAGTTC
AGCACCGACTCGCCTCGCTTGTTGGCCTCCCCCTCCAGCAGGATTATTGATGTTTCAGCTACTA
TGCCTAAGTTTACAAACACGCAGATTACGGAACATTACTCCACCTGTATCAAACTGTCCACTGA
AAATAAAATCACTACCAAGAATGCTTTTGGTTTGCACTTGATTGATTTTATGTCAGAGATTCTT
AAACAGAAAGACACCGAACCAACCAACTTTAAAGTGGCTGCAGGCACTCTGGATGCCAGCACTA
AGATCTATGCGGTACGTGTGGACGCCGTCCATGCCGACGTATACAGAGTCCTTGGGGGCCTGGG
CAAAGATGCACCGTCTTTGGAAGAAGTGGAAGGCCATGTTGCAGATGGAAGTGCTACTGAAATG
GGAACAACCAAAAAGGCTCCAAAGCCAAAGAAGAAGCTCTTACACAGAACCATCGAGCAGAACA
TAAACAACCTCAATGTCTCCGAAGCAGATCGGAAGTGTGAGATTGATCCCATGTTTCAGAAGAC
GGCAGCCTCGTTTGATGAGTGCAGCACAGCGGGGGTGTTTCTGTCCACGCTCCACTGCCAGGAC
TACAGAAGTGAGCTGCTGTTCCCCTCTGATGTCCAGACACTCTCCACGGGAGAACCTCTCGAGT
TGCCAGAGTTAGGTTGGGTAGAAATGACAGATTTAAAAGCGCCCTTGCAGCAGTGTGCGGAAGA
TCGCCAGATCTGCCCTTCCCTGGCCGGGTTCCAGTTTACTCAGTGGGACAGTGAAACACATAAT
GAGTCTGTGTCGGCCCTGGTAGACAAGTTTAAGAAGAATGACCAGGTGTTTGACATCAACGCTG
AAGTTGAGAGTGACTGCGGAGACGTCCCTGATGGGTCCCTGGGGGATGACTTTGATGCCAACGA
TGAACCCGACCGCACTGCAGTTGGGGATCATGAAGAGTTCAGGAGCTGGAAGGAGCCCTGCCAG
GTTCAGAGCTGCCAGGAAGAAATGATTTCCCTCGGGGATGGAGACGTCAGGACCATGTGCCCCC
TTCTGTCTATGAAACCTGGAGAATATTCTTATTTCAGTCCTCGGACCATGTCGATGTGGGCTGG
CCCGGATCACTGGCGCTTTAGGCCTCGACGCAAACAAGATGCTCCCTCCCAATCAGAAAACAGA
AAGAAGAGTACAAAGAAAGATTTTGAAATTGACTTTGAAGATGATATTGACTTTGATGTCTATT
TTAGAAAAACAAAGGCTGCTACTATTCTGACCAAGTCCACTTTGGAGAACCAGAACTGGAGAGC
TACTACCCTTCCTACGGATTTCCACTACGACGTCGACACCCTGGTCCAGCTCCACCTCAAACCA
GGCACCAGATTACTTAAGATGGCCCAGGGCCGAAGGGCAGAGACTGAGCATTATGAAGAAATTG
AAGACTATGATTACAACAACCCTAACGACACCTCCAACTTCTGCCCTGGATTACAGGCTGCCGA
CAGTGATGATGAAGATTCTGATGACTTATTTGTGGGACCAGTTGGGAACTCTGACCTCTCACCT
TATCCTTGCCATCCACCTAAGACAGCACAACAGAATGGTGACACTCCGGAAGCCCAAGGATTAG
ACATCACAACATATGGGGAGTCAAACCTGGTAGCCGAGCCTCAGAAGGTAAATAAAATTGAAAT
TCACTATGCCAAGACTGCCAAAAAGATGGACATGAAGAAGTTGAAGCAGAGCATGTGGAGTCTG
CTGACAGCGCTCTCCGGAAAGGAGGCAGATGCAGAGGCAAACCACAGGGAAGCTGGAAAAGAAG
GGGCCCTGGCAGAAGTGGCTGACAAGAAGATGCTCAGCGGGCTCACGAAGGACCTGCAGAGAAG
CCTGCCCCCTGTCATGGCTCAGAACCTCTCCATACCTCTGGCTTTTGCCTGTCTCCTACATTTA
GCCAATGAAAAGAATCTAAAGCTGGAAGGAACAGAGGACCTCTCTGACGTTCTTGTGAGGCAAG
GAGATTGAGTTCACTGTGGAGAAGTCAGGAGGCCCGTCACTTACTCAGCTGCCAGGACAGCCCC
AGTCTGGGTGGAAGAAGATGCCATGGGCTTATACCCAGGCTGTAGCCAACTACCAGCGTGCCTG
TTTATTTGTTGCCCTTTCCTTCTCTCCGTCACGGTCTGGGTGCCCGCGCCCTGAAGCTCTGCGC
TTGACTGATTAAACTTTACTGCCCTGTGGTGACCATCTAGGAGAGGGGAGGGCAGAGCGGGTGA
GGGTACTGTTCTGGATCGAGGAAACCTATATCCATTCTTCGTATCAGTGAATAGTTTTAGTCTC
CTAAGTTGATCTGTTGTTTTCCAAACTCTACTCTTGTAGGAAATTTTCCAGTGGGCACTGAATG
TTGCCCTTGAAGAACGTCCTAATCCATGTACATGAAATACACCATATGTACACTTATAAATGTA
TATAGAATGCTCAAAAATAAAATTCTTAATAATATAACTGGCAAAA

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Protein Sequences


Protein RefSeqs	XP_008006163	(Get FASTA)	NCBI Sequence Viewer
	XP_008006164	(Get FASTA)	NCBI Sequence Viewer
	XP_008006165	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000013396
	ENSCSAP00000013396.1

RefSeq Acc Id:	XP_008006165 ⟸ XM_008007974
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RXQ7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008006164 ⟸ XM_008007973
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_008006163 ⟸ XM_008007972
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSCSAP00000013396 ⟸ ENSCSAT00000015455

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000017364	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000015455.1	UniProtKB/TrEMBL
InterPro	Condensin_barren_su2	UniProtKB/TrEMBL
NCBI Gene	NCAPH	ENTREZGENE
PANTHER	CONDENSIN COMPLEX SUBUNIT 2	UniProtKB/TrEMBL
	PTHR13108	UniProtKB/TrEMBL
Pfam	Cnd2	UniProtKB/TrEMBL
PIRSF	Condensin_H	UniProtKB/TrEMBL
UniProt	A0A0D9RXQ7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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