SYN2 (synapsin II) - Rat Genome Database

Name: SYN2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SYN2 (synapsin II) Chlorocebus sabaeus

Analyze

Symbol:

SYN2

Name:

synapsin II

RGD ID:

18555917

Description:

ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); neurotransmitter secretion (ortholog); synaptic vesicle clustering (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

synapsin-2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SYN2 (synapsin II)	NCBI	Ortholog
Mus musculus (house mouse):	Syn2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Syn2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Syn2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SYN2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SYN2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Syn2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SYN2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Syn2 (synapsin II)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	47,994,593 - 48,171,291 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	48,092,452 - 48,171,492 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	118,328,888 - 118,521,429 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

COVID-19 (ISO)

epilepsy (ISO)

genetic disease (ISO)

Hyperalgesia (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium-ion regulated exocytosis (ISO)

neurotransmitter secretion (IEA,ISO)

synaptic vesicle clustering (ISO)

synaptic vesicle cycle (ISO)

Cellular Component

extrinsic component of synaptic vesicle membrane (ISO)

glutamatergic synapse (ISO)

plasma membrane (ISO)

postsynaptic density (ISO)

presynapse (ISO)

Schaffer collateral - CA1 synapse (ISO)

SNARE complex (ISO)

synapse (IEA)

synaptic vesicle (IEA)

synaptic vesicle membrane (IEA)

Molecular Function

ATP binding (IEA)

calcium-dependent protein binding (ISO)

identical protein binding (ISO)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SYN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	47,994,593 - 48,171,291 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	48,092,452 - 48,171,492 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	118,328,888 - 118,521,429 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SYN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	12,004,388 - 12,192,032 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	12,004,388 - 12,192,032 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	12,045,862 - 12,233,532 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	12,020,862 - 12,208,532 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	12,020,864 - 12,207,885	NCBI
Celera	3	11,982,988 - 12,170,949 (+)	NCBI		Celera
Cytogenetic Map	3	p25.2	NCBI
HuRef	3	11,979,136 - 12,167,274 (+)	NCBI		HuRef
CHM1_1	3	11,995,629 - 12,183,794 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	12,002,345 - 12,190,266 (+)	NCBI		T2T-CHM13v2.0

Syn2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	115,111,863 - 115,259,587 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	115,111,863 - 115,258,967 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	115,134,902 - 115,282,626 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	115,134,902 - 115,282,006 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	115,084,920 - 115,232,644 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	115,916,516 - 116,057,028 (+)	NCBI		MGSCv36	mm8
MGSCv36	6	115,100,521 - 115,240,707 (+)	NCBI		MGSCv36	mm8
Celera	6	116,972,908 - 117,121,654 (+)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	53.2	NCBI

Syn2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	149,858,919 - 150,016,845 (+)	NCBI		GRCr8
mRatBN7.2	4	148,178,846 - 148,347,010 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	148,186,270 - 148,344,192 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	154,411,352 - 154,569,498 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	150,194,433 - 150,352,589 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	148,818,234 - 148,976,405 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	147,037,179 - 147,195,096 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	147,037,179 - 147,195,096 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	210,326,340 - 210,483,842 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	151,255,241 - 151,413,220 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	151,500,081 - 151,650,682 (+)	NCBI
Celera	4	137,080,501 - 137,237,898 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

Syn2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955429	14,676,286 - 14,724,625 (+)	NCBI	ChiLan1.0	ChiLan1.0

SYN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	11,996,087 - 12,180,017 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	12,000,852 - 12,184,778 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	11,935,680 - 12,118,981 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	12,275,084 - 12,465,806 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	12,282,573 - 12,464,413 (+)	Ensembl	panpan1.1		panPan2

SYN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	6,368,348 - 6,569,355 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	6,369,122 - 6,568,508 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	6,404,468 - 6,604,803 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	6,397,481 - 6,598,475 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	6,397,505 - 6,598,637 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	6,115,658 - 6,316,632 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	6,466,601 - 6,671,741 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	6,442,191 - 6,642,971 (-)	NCBI		UU_Cfam_GSD_1.0

Syn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	17,360,718 - 17,449,110 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	1,461,338 - 1,507,272 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936602	1,460,602 - 1,506,509 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SYN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	68,050,535 - 68,221,496 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	68,050,015 - 68,221,504 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	75,262,707 - 75,435,410 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Syn2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624956	303,011 - 349,857 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624956	302,239 - 467,319 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	14		43
Low	22	14	17
Below cutoff		3

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007985254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007985255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000007940 ⟹ ENSCSAP00000006100

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	22	48,092,452 - 48,171,492 (+)	Ensembl

RefSeq Acc Id:

XM_007985254 ⟹ XP_007983445

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	22	48,091,844 - 48,171,291 (+)	NCBI
Vero_WHO_p1.0	NW_023666041	118,328,888 - 118,411,204 (-)	NCBI

Sequence:

show sequence

TATAAATTACCCAGTCTCAGGTATGTCTTTATTAGCAGTATGAAAACAGACTAATATACTTACC
TAATGGGGTTGTGGTCTGTATATACTTAGCATGGTATCTGTCATTTTGACCCTCAATAAAGGTT
AGCTGTTATTATTTTCATCATCAGGATTATCATCATCTCATCCTATTCAGATCCTTCTCAGGTC
CTTTGACAACCCTAAAGAACTAGAAATTCCTAAGCACTCCTATTCGATGGTTTGGAGGAAGCGG
TTTCCATCTTTTAGCAGATCTTCCTTTTTAGACCTTCCTCTTTATCTTAAGTGAGACTTTTAAC
TCAAAAGCTTTGAATTTACTTTTAGTGCCAATATATTACCCACTCTACTGGCTTACCCAGTGGT
TCTGGTTAGTAGGCTGTTTTTTAACAAAACCAGATCCAAACTCTTTGCTCATCAGTTCACTGCT
TTGGGCCATTCATTGCTAGGGATATTGACTACTGTTCCCTGTTGACAAATTAGAGAATCCTCGG
CTAGTGTAGTGTGATGTATTATTTTGGGATGCCCATACATTAAGGGACTGGGAGAAGGAATCCT
GGTGTCTGATAAAATGAAATAAAATCTGGGTCATGGCATCTTTGTTGTATCCAGCAGGCTTCCA
GGAAGGCAACTTTCAGAAACTTCTTAGGACATTGGCAGAAACTCTGAGGGCCAAGTGCTTTCGG
GGCAAAAAAGTCCTTGGAGATTATGATATCAAGGTGGAACAGGCAGAATTTTCAGAGCTCAACC
TGGTGGCCCATGCAGATGGCACCTATGCTGTGGATATGCAGGTTCTCCGGAATGGCACAAAGGT
TGTCCGGTCCTTCCGGCCAGACTTCGTGCTCATCCGGCAGCATGCATTTGGCATGGCGGAGAAT
GAGGACTTCCGCCACCTGATCATTGGCATGCAGTATGCAGGCCTCCCCAGCATCAACTCACTGG
AATCCATATACAACTTCTGTGACAAGCCATGGGTGTTTGCCCAGCTGGTCGCCATCTACAAGAC
ACTGGGAGGAGAAAAGTTCCCTCTCATTGAGCAGACATACTACCCCAACCACAAAGAGATGCTG
ACACTGCCCACGTTCCCTGTGGTGGTGAAGATTGGCCACGCTCACTCAGGCATGGGCAAGGTCA
AAGTGGAAAACCACTACGACTTCCAGGACATTGCCAGTGTGGTGGCTCTTACCCAGACCTATGC
CACTGCAGAGCCTTTCATTGACTCCAAGTATGACATCCGGGTCCAGAAGATCGGCAACAACTAC
AAGGCTTACATGAGGACGTCGATCTCAGGGAACTGGAAGACGAACACTGGCTCTGCAATGCTGG
AGCAGATCGCCATGTCAGACAGGTACAAACTGTGGGTGGACACCTGCTCTGAGATGTTTGGCGG
CCTGGACATCTGTGCCGTCAAAGCTGTACATGGCAAAGATGGGAAAGACTACATTTTTGAGGTC
ATGGACTGTAGCATGCCACTGATTGGGGAACATCAAGTAGAGGACAGGCAACTCATCACCGAAC
TAGTCATCAGCAAGATGAACCAGCTGCTGTCCAGGACTCCTGCCCTGTCTCCTCAGAGACCCCT
AACAACCCAGCAGCCACAGAGCGGAACACTTAAGGATCCGGACTCAAGCAAGACCCCACCTCAG
CGGCCACCCCCTCAAGGGGGCCCTGGGCAACCCCAAGGAATGCAGCCCCCAGGCAAGGTGCTGC
CTCCACGCCGGCTCCCCCCTGGACCATCACTGCCACCTTCCTCCTCTTCCTCCTCCTCTTCCTT
CTCCTCGGCTCCTCAGCGGCCGGGCGGCCCCACCACCCACGGAGATGCACCCTCCAGCAGCAGC
TCCCTGGCAGAGGCCCAGCCACCCCTGGCTGCTCCACCACAGAAGCCCCAGCCTCACCCACAGC
TCAACAAGTCGCAGTCCCTGACAAATGCCTTCAGCTTCTCTGAGTCCTCCTTCTTCCGGTCTTC
AGCCAATGAGGATGAAGCCAAAGCGGAGACCATCCGGAGCTTGAGGAAGTCCTTTGCCAGCCTC
TTTTCAGATTAGCTCTTCAGACACACGGGGCACCCGGCCCAACCAGGAAAGGCATTTAAGACAT
TCACCAACAACAGTCAGCCAGCTTGGTGGTGATGTCCCATGACCTTGATGTGTGTGGTCCCTTC
CTCTGCTCTGTTGTGCTAAGTGATGTTATGCAGCCCAGAAAGGACCATGTGACAGTCTCAGGGC
AGGTGCCTACCCAGCAAGGGGTACCTGGCATCAGAGAGGAAAGAGCTGCTTCCCTGTAGTCACG
AGAGCTTCCTTCTGAAGTCATCGTTTGCTATAAGTTTAGTGGCCTTATTGTGACAGCGCCATCA
TGTCTTATTCTTCCCTGTGAAACCAGGATTAATCGTGGACTCCTGGCAGCTTAACCTAGCTCAG
TTGCAGTGCTAAGCATGCCCTGCCTCCATTCAGTGATACCTGTTTGGGAAGTGTATACTTCCCT
AAAAGTACTCTTGGCCCTAAGTTTTGGGAACTTTCCCTATCCTGGATCCCTTGTCATACCTGTG
TTACTGTTTAAAGCACACCCACCCAACTTACAAGATCTTAGGCTGCTGTGGTGGTGAAGCACCT
TGAGTCTGCTGATATTCGGGAGAACAAGGATCTGCAGTTTCCCGTTTTCTTCCCTCTGAAGAGT
GGTTCTTATGTGCAATCTGCAGTAACCTTGAACTCCAGAGCTACACTATAGAGGAGAATGCATG
CCACTATGACAGCAGTATGCCAAGCTTTGTGTTCATCTCCTAATAAATGTTAAGACCTTTGGTG
TAATAAAAGCAGCAGCATTCACCAACA

hide sequence

RefSeq Acc Id:

XM_007985255 ⟹ XP_007983446

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	22	47,994,593 - 48,171,291 (+)	NCBI
Vero_WHO_p1.0	NW_023666041	118,328,888 - 118,521,429 (-)	NCBI

Sequence:

show sequence

GCCCCTGCCCCGCCCGCTCCCTCTCAGCGAGCCTCGCGCCGCCCGGCTTGCCTGGCCCAGTCGG
CCGCGGCTGTCTGCGGGGTTTGGCGCCGGGGGCAGAGTCTCTGCTGCCTAAGCCGCTGCCTCAG
CCGCCTCAGCCGCCTCAGCCTCGCCTTCCGCCCTCGCTCTCCCTCCGCGCCGCCGGACCCCGTA
GCCCCGCGCGCCCCCAGCCCGTCAAGCCAGATGATGAACTTCCTGCGGCGCCGGCTGTCGGACA
GCAGCTTCATCGCCAACCTGCCCAACGGCTACATGACCGACCTGCAGCGGCCCGAGCCCCAGCA
GCCGCCGCCGCCCCCCGGCCCGGGCGCGGCCTCGGCCTCGGCTGCGCCCCCGACCGCCTCGCCG
GGCCCGGAGCGAAGGCCGCCGCCCGCCTCGGCGCCCGTGCCGCAGCCTGCGCCGCAGCCCGCGC
CGACGCCGTCGGTGGGCAGCAGCTTCTTCAGCTCGCTGTCCCAAGCTGTGAAGCAGACCGCCGC
CTCGGCTGGCCTGGTGGACGCGCCCGCGCCCGCGCCCGCCGCTGCCAGGAAGGCCAAGGTGCTG
CTGGTGGTCGACGAGCCGCACGCCGACTGGGCCAAGTGCTTTCGGGGCAAAAAAGTCCTTGGAG
ATTATGATATCAAGGTGGAACAGGCAGAATTTTCAGAGCTCAACCTGGTGGCCCATGCAGATGG
CACCTATGCTGTGGATATGCAGGTTCTCCGGAATGGCACAAAGGTTGTCCGGTCCTTCCGGCCA
GACTTCGTGCTCATCCGGCAGCATGCATTTGGCATGGCGGAGAATGAGGACTTCCGCCACCTGA
TCATTGGCATGCAGTATGCAGGCCTCCCCAGCATCAACTCACTGGAATCCATATACAACTTCTG
TGACAAGCCATGGGTGTTTGCCCAGCTGGTCGCCATCTACAAGACACTGGGAGGAGAAAAGTTC
CCTCTCATTGAGCAGACATACTACCCCAACCACAAAGAGATGCTGACACTGCCCACGTTCCCTG
TGGTGGTGAAGATTGGCCACGCTCACTCAGGCATGGGCAAGGTCAAAGTGGAAAACCACTACGA
CTTCCAGGACATTGCCAGTGTGGTGGCTCTTACCCAGACCTATGCCACTGCAGAGCCTTTCATT
GACTCCAAGTATGACATCCGGGTCCAGAAGATCGGCAACAACTACAAGGCTTACATGAGGACGT
CGATCTCAGGGAACTGGAAGACGAACACTGGCTCTGCAATGCTGGAGCAGATCGCCATGTCAGA
CAGGTACAAACTGTGGGTGGACACCTGCTCTGAGATGTTTGGCGGCCTGGACATCTGTGCCGTC
AAAGCTGTACATGGCAAAGATGGGAAAGACTACATTTTTGAGGTCATGGACTGTAGCATGCCAC
TGATTGGGGAACATCAAGTAGAGGACAGGCAACTCATCACCGAACTAGTCATCAGCAAGATGAA
CCAGCTGCTGTCCAGGACTCCTGCCCTGTCTCCTCAGAGACCCCTAACAACCCAGCAGCCACAG
AGCGGAACACTTAAGGATCCGGACTCAAGCAAGACCCCACCTCAGCGGCCACCCCCTCAAGGGG
GCCCTGGGCAACCCCAAGGAATGCAGCCCCCAGGCAAGGTGCTGCCTCCACGCCGGCTCCCCCC
TGGACCATCACTGCCACCTTCCTCCTCTTCCTCCTCCTCTTCCTTCTCCTCGGCTCCTCAGCGG
CCGGGCGGCCCCACCACCCACGGAGATGCACCCTCCAGCAGCAGCTCCCTGGCAGAGGCCCAGC
CACCCCTGGCTGCTCCACCACAGAAGCCCCAGCCTCACCCACAGCTCAACAAGTCGCAGTCCCT
GACAAATGCCTTCAGCTTCTCTGAGTCCTCCTTCTTCCGGTCTTCAGCCAATGAGGATGAAGCC
AAAGCGGAGACCATCCGGAGCTTGAGGAAGTCCTTTGCCAGCCTCTTTTCAGATTAGCTCTTCA
GACACACGGGGCACCCGGCCCAACCAGGAAAGGCATTTAAGACATTCACCAACAACAGTCAGCC
AGCTTGGTGGTGATGTCCCATGACCTTGATGTGTGTGGTCCCTTCCTCTGCTCTGTTGTGCTAA
GTGATGTTATGCAGCCCAGAAAGGACCATGTGACAGTCTCAGGGCAGGTGCCTACCCAGCAAGG
GGTACCTGGCATCAGAGAGGAAAGAGCTGCTTCCCTGTAGTCACGAGAGCTTCCTTCTGAAGTC
ATCGTTTGCTATAAGTTTAGTGGCCTTATTGTGACAGCGCCATCATGTCTTATTCTTCCCTGTG
AAACCAGGATTAATCGTGGACTCCTGGCAGCTTAACCTAGCTCAGTTGCAGTGCTAAGCATGCC
CTGCCTCCATTCAGTGATACCTGTTTGGGAAGTGTATACTTCCCTAAAAGTACTCTTGGCCCTA
AGTTTTGGGAACTTTCCCTATCCTGGATCCCTTGTCATACCTGTGTTACTGTTTAAAGCACACC
CACCCAACTTACAAGATCTTAGGCTGCTGTGGTGGTGAAGCACCTTGAGTCTGCTGATATTCGG
GAGAACAAGGATCTGCAGTTTCCCGTTTTCTTCCCTCTGAAGAGTGGTTCTTATGTGCAATCTG
CAGTAACCTTGAACTCCAGAGCTACACTATAGAGGAGAATGCATGCCACTATGACAGCAGTATG
CCAAGCTTTGTGTTCATCTCCTAATAAATGTTAAGACCTTTGGTGTAATAAAAGCAGCAGCATT
CACCAACA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007983445	(Get FASTA)	NCBI Sequence Viewer
	XP_007983446	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000006100.1

RefSeq Acc Id:	XP_007983446 ⟸ XM_007985255
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007983445 ⟸ XM_007985254
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSCSAP00000006100 ⟸ ENSCSAT00000007940

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000009855	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000007940.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.1490.20	UniProtKB/TrEMBL
	3.40.50.20	UniProtKB/TrEMBL
	ATP-grasp fold, B domain	UniProtKB/TrEMBL
InterPro	ATP_grasp_subdomain_1	UniProtKB/TrEMBL
	PreATP-grasp_dom_sf	UniProtKB/TrEMBL
	Synapsin	UniProtKB/TrEMBL
	Synapsin_ATP-bd_dom	UniProtKB/TrEMBL
	Synapsin_CS	UniProtKB/TrEMBL
	Synapsin_pre-ATP-grasp_dom	UniProtKB/TrEMBL
KEGG Report	csab:103228024	UniProtKB/TrEMBL
NCBI Gene	SYN2	ENTREZGENE
PANTHER	PTHR10841:SF20	UniProtKB/TrEMBL
	SYNAPSIN	UniProtKB/TrEMBL
Pfam	Synapsin	UniProtKB/TrEMBL
	Synapsin_C	UniProtKB/TrEMBL
PRINTS	SYNAPSIN	UniProtKB/TrEMBL
PROSITE	SYNAPSIN_2	UniProtKB/TrEMBL
Superfamily-SCOP	Glutathione synthetase ATP-binding domain-like	UniProtKB/TrEMBL
	SSF52440	UniProtKB/TrEMBL
UniProt	A0A0D9RBW1_CHLSB	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM