NFKBID (NFKB inhibitor delta) - Rat Genome Database

Name: NFKBID
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: NFKBID (NFKB inhibitor delta) Chlorocebus sabaeus

Analyze

Symbol:

NFKBID

Name:

NFKB inhibitor delta

RGD ID:

18538449

Description:

ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of T cell differentiation in thymus (ortholog); positive regulation of T-helper 17 cell differentiation (ortholog); ASSOCIATED WITH Brugada syndrome 5 (ortholog); common variable immunodeficiency 12 (ortholog); genetic disease (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

NF-kappa-B inhibitor delta

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	30,800,122 - 30,812,991 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	30,799,204 - 30,811,141 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	8,592,871 - 8,607,362 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brugada syndrome 5 (ISO)

common variable immunodeficiency 12 (ISO)

genetic disease (ISO)

hereditary spastic paraplegia 75 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of canonical NF-kappaB signal transduction (ISO)

negative regulation of T cell differentiation in thymus (ISO)

positive regulation of T-helper 17 cell differentiation (ISO)

positive regulation of thymocyte apoptotic process (ISO)

regulation of gene expression (IEA)

T cell differentiation in thymus (ISO)

T cell receptor signaling pathway (ISO)

thymocyte apoptotic process (ISO)

Cellular Component

nucleus (IEA)

Molecular Function

NF-kappaB binding (ISO)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

NFKBID
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	30,800,122 - 30,812,991 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	30,799,204 - 30,811,141 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	8,592,871 - 8,607,362 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

NFKBID
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	35,887,952 - 35,902,303 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	35,887,653 - 35,902,303 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	36,378,854 - 36,393,205 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	41,070,983 - 41,083,392 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	33,093,331 - 33,105,743 (-)	NCBI		Celera
Cytogenetic Map	19	q13.12	NCBI
HuRef	19	32,884,386 - 32,896,797 (-)	NCBI		HuRef
CHM1_1	19	36,380,424 - 36,392,833 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	38,433,711 - 38,448,068 (-)	NCBI		T2T-CHM13v2.0

Nfkbid
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	30,121,156 - 30,128,173 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	30,121,157 - 30,128,171 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	30,421,731 - 30,428,749 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	30,421,732 - 30,428,746 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	31,208,323 - 31,213,765 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	30,132,064 - 30,137,506 (+)	NCBI		MGSCv36	mm8
Celera	7	25,015,002 - 25,020,443 (+)	NCBI		Celera
Cytogenetic Map	7	B1	NCBI
cM Map	7	17.52	NCBI

Nfkbid
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	94,808,459 - 94,824,726 (+)	NCBI		GRCr8
mRatBN7.2	1	85,679,353 - 85,690,415 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	85,680,861 - 85,690,447 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	1	88,883,816 - 88,892,543 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	88,885,937 - 88,892,615 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	90,039,481 - 90,048,087 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	85,374,259 - 85,383,179 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	85,451,333 - 85,461,546 (+)	NCBI
Celera	1	80,052,701 - 80,061,438 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Nfkbid
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	2,680,806 - 2,689,155 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	2,680,934 - 2,688,797 (+)	NCBI	ChiLan1.0	ChiLan1.0

NFKBID
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	41,887,097 - 41,900,701 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	43,864,145 - 43,883,737 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	32,805,772 - 32,817,778 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	41,553,727 - 41,565,216 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	41,553,727 - 41,568,555 (-)	Ensembl	panpan1.1		panPan2

NFKBID
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	116,763,371 - 116,770,683 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	116,757,289 - 116,772,325 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	116,168,829 - 116,176,249 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	117,366,444 - 117,373,869 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	117,366,573 - 117,374,251 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	116,930,000 - 116,937,419 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	116,553,532 - 116,560,938 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	117,609,295 - 117,616,723 (+)	NCBI		UU_Cfam_GSD_1.0

Nfkbid
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	11,174,549 - 11,181,459 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936570	463,974 - 471,344 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936570	464,513 - 471,333 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NFKBID
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	45,298,288 - 45,306,316 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	45,298,289 - 45,307,471 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	40,700,968 - 40,708,833 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Nfkbid
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624794	10,168,792 - 10,179,510 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624794	10,172,789 - 10,180,693 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium
Low	36	20	54
Below cutoff			6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007996441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007996442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007996443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007996444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037991572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037991573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037991574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000002320 ⟹ ENSCSAP00000000641

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	6	30,799,204 - 30,811,141 (-)	Ensembl

RefSeq Acc Id:

XM_007996442 ⟹ XP_007994633

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	30,800,122 - 30,812,991 (-)	NCBI
Vero_WHO_p1.0	NW_023666073	8,592,871 - 8,605,861 (-)	NCBI

Sequence:

show sequence

TCCGCCTCCCAAGTCCACCCTGCCCATTCAGGGACTGCGTTCGCCGGAGCGCGACCCGGGGACT
CCCAGGCTTGTGGGCGGGCCCTGCCCAGGACTGGGCGGTGCCAGAACCCCTAGTTTAAAAACTC
GCGGGTACCGGACCTAAGATCGGGGACCCGGCGGCGGCTCCGCGGGGGAAACAGCGAGGCTGGC
GCAGCGCCGAGGCCGCGGCCCTGGGGGCCCGCAATCCACGCCAAGGAATCCCCGAGTGAGCAGG
GGTGAGCGCAGTCACTGCCCAACACAAACCGTGAAGAAGCTTCTGGAAGAGCAGAGGCGCCGCC
AGCAGCAGCAGCCGGACGCTGGCGGGGTGCAGGGACAATTTCTCCCTCCCCCAGAGCAGCCCCT
GACCCCATCTGTGAATGAGGCTGTGACTGGCCACCCTCCCTTCCCAGCACACTCGGAGACTGTG
GGTTCTGGACTTAGCAGCCTGGGTCTCCCCATGGGCTTTCCAGACTGGGACCCCAACACGCATG
CTGCCTACACAGACAGCCCCTACTCTTGCCCTGCTTCTGCTGCCGAAAGTTTCCTGCCTCCTGA
CTTCTACCCACCCTCGGACCCAGGGCAGCCGTGCCCATTTCCCCAGGGCATGGAGGCAGGACCC
TGGAGAGTTTCTACACTCCCTTCGGGACCCCCACAGTTCCCCGCTGTGGTCCCTGGACCATCGC
TGGAGGCGGCCCGAGCTCACATACTGGCTTTGGGGCCACAGCAGCTGCTGGCCCAGGATGAGGA
GGGGGACACGCTCCTTCACCTGTTTGCGGCTCGGGGGCTGCGCTGGGCGGCGTATGCTGCGGCT
GAGGTGCTCCAGGTGTACCGGCGTCTTGACATTCGTGAGCATAAGGGCAAGACCCCTCTCCTGG
TGGCGGCTGCTGCCAACCAGCCCCTGATTGTGGAGGATCTGCTGAACCTGGGAGCAGAGCCCAA
CGCCACTGACCATCAGGGACGTTCGGTCTTGCACGTGGCCGCTACCTATGGGCTCCCAGGAGTT
CTCTTGGCTGTGCTTAACTCCGGGGTCCAGGTTGACCTGGAAGCCAGAGACTTCGAGGGCCTCA
CCCCGCTCCACACGGCCATCCTGGCCCTTAACGTTGCTATGCGCCCTTCTGACCTCTGCCCCCG
GGTGCTGAGCACGCAGGCCCGAGACAGACTGGATTGTGTCCACATGTTGCTGCAAATGGGTGCT
AATCACACCAGCCAGGAGATCAAGAGCAACAAGACAGTTCTGCACTTGGCCGTGCAGGCTGCCA
ACCCCACTGTGGTTCAGCTGCTGCTGGAGCTGCCCCGGGGAGACCTGCGGACCTTTGTCAACAT
GAAGGCCCACGGGAACACAGCCCTCCACATGGCGGCTGCCCTGCCCCCTGGGCCAGCCCAGGAG
GCCATCGTGCGGCACCTGTTGGCAGCTGGGGCGGACCCCACACTGCGCAACCTGGAGAACGAGC
AGCCCGTTCACCTGCTGCGGCCCGGGCCGGGCCCTGAGGGGCTCCGGCAGCTGTTGAAGAGAAG
CCGTGTGGCGCCGCCAGGCCTGTCCTCTTAGGACTCAAACCCAGACCCTGGACTGATTTTCCAG
TCCCCACCGTCCTGCGGGACAGCCAGCGTATGCTAATGTTGCAAAACCATGATAATGTATGTGG
AATATCCTGCCATTGGGGTCTTACATTAAAACCCCAGAATGGCTGCAGAGGGGTGAACAGGCCC
CAATATTTGGGGTGCTGTGATACCCCTCTTCTACCCACAAGGAGCCCTCTTGATGATTTCTGTG
AAATCGAGGCCCCTTGTTTGTTTCTGTGAAACACCCTGCACCCTTAGTCCTTTCCCCGCTGAGA
TCCTTCGGGTTCTCTCCCATAACTCAGCTCTTCGTTCCCAGAAACCCAAATGTAATCCCCCTAC
GTGGTGCTTGGGGCATCTCAGTACCATCTCAGTAAAGCTCCTACGATGGCCTCCTCGCCCTCCC
CAGGACCCAAACCCTTTGGGTCCTCACCCTGAGAGAGGAGGGACCCTCTGAGATCAGGGACCCT
TAGGTCCCACTGCTCTCTGATTCAGAACTCAGCTGGGCCCCGCTCCAGACCCCAGCATTCCTGG
TCACTCCCTCCCTAATCTGAGCATCTCTCAAGCTCTTTATTAAACTCAATTTGGGTTAGGTTTG
GTGGTTCATGCCTATAATCCTAACACTCTGGGAGGCCGAGGCGGGTGGATCAGTTGAGGTCAGG
AGTTTGAGACCAGC

hide sequence

RefSeq Acc Id:

XM_007996444 ⟹ XP_007994635

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	30,800,122 - 30,812,844 (-)	NCBI
Vero_WHO_p1.0	NW_023666073	8,592,871 - 8,605,658 (-)	NCBI

Sequence:

show sequence

TCGGGGACCCGGCGGCGGCTCCGCGGGGGAAACAGCGAGGCTGGCGCAGCGCCGAGGCCGCGGC
CCTGGGGGCCCGCAATCCACGCCAAGGAATCCCCGAGTGAGCAGGGGTGAGCGCAGTCACTGCC
CAACACAAACCGTGAAGAAGCTTCTGGAAGAGCAGAGGCGCCGCCAGCAGCAGCAGCCGGACGC
TGGCGGGGTGCAGGGACAATTTCTCCCTCCCCCAGAGCAGCCCCTGACCCCATCTGTGAATGAG
GCTGTGACTGGCCACCCTCCCTTCCCAGCACACTCGGAGACTGTGGGTTCTGGACTTAGCAGCC
TGGGTCTCCCCATGGGCTTTCCAGACTGGGACCCCAACACGCATGCTGCCTACACAGACAGCCC
CTACTCTTGCCCTGCTTCTGCTGCCGAAAGTTTCCTGCCTCCTGACTTCTACCCACCCTCGGAC
CCAGGGCAGCCGTGCCCATTTCCCCAGGGCATGGAGGACCCCCCGGACACCCGGTTCTATGCAG
AATCTTCCCTACCACAGGCAGGACCCTGGAGAGTTTCTACACTCCCTTCGGGACCCCCACAGTT
CCCCGCTGTGGTCCCTGGACCATCGCTGGAGGCGGCCCGAGCTCACATACTGGCTTTGGGGCCA
CAGCAGCTGCTGGCCCAGGATGAGGAGGGGGACACGCTCCTTCACCTGTTTGCGGCTCGGGGGC
TGCGCTGGGCGGCGTATGCTGCGGCTGAGGTGCTCCAGGTGTACCGGCGTCTTGACATTCGTGA
GCATAAGGGCAAGACCCCTCTCCTGGTGGCGGCTGCTGCCAACCAGCCCCTGATTGTGGAGGAT
CTGCTGAACCTGGGAGCAGAGCCCAACGCCACTGACCATCAGGGACGTTCGGTCTTGCACGTGG
CCGCTACCTATGGGCTCCCAGGAGTTCTCTTGGCTGTGCTTAACTCCGGGGTCCAGGTTGACCT
GGAAGCCAGAGACTTCGAGGGCCTCACCCCGCTCCACACGGCCATCCTGGCCCTTAACGTTGCT
ATGCGCCCTTCTGACCTCTGCCCCCGGGTGCTGAGCACGCAGGCCCGAGACAGACTGGATTGTG
TCCACATGTTGCTGCAAATGGGTGCTAATCACACCAGCCAGGAGATCAAGAGCAACAAGACAGT
TCTGCACTTGGCCGTGCAGGCTGCCAACCCCACTGTGGTTCAGCTGCTGCTGGAGCTGCCCCGG
GGAGACCTGCGGACCTTTGTCAACATGAAGGCCCACGGGAACACAGCCCTCCACATGGCGGCTG
CCCTGCCCCCTGGGCCAGCCCAGGAGGCCATCGTGCGGCACCTGTTGGCAGCTGGGGCGGACCC
CACACTGCGCAACCTGGAGAACGAGCAGCCCGTTCACCTGCTGCGGCCCGGGCCGGGCCCTGAG
GGGCTCCGGCAGCTGTTGAAGAGAAGCCGTGTGGCGCCGCCAGGCCTGTCCTCTTAGGACTCAA
ACCCAGACCCTGGACTGATTTTCCAGTCCCCACCGTCCTGCGGGACAGCCAGCGTATGCTAATG
TTGCAAAACCATGATAATGTATGTGGAATATCCTGCCATTGGGGTCTTACATTAAAACCCCAGA
ATGGCTGCAGAGGGGTGAACAGGCCCCAATATTTGGGGTGCTGTGATACCCCTCTTCTACCCAC
AAGGAGCCCTCTTGATGATTTCTGTGAAATCGAGGCCCCTTGTTTGTTTCTGTGAAACACCCTG
CACCCTTAGTCCTTTCCCCGCTGAGATCCTTCGGGTTCTCTCCCATAACTCAGCTCTTCGTTCC
CAGAAACCCAAATGTAATCCCCCTACGTGGTGCTTGGGGCATCTCAGTACCATCTCAGTAAAGC
TCCTACGATGGCCTCCTCGCCCTCCCCAGGACCCAAACCCTTTGGGTCCTCACCCTGAGAGAGG
AGGGACCCTCTGAGATCAGGGACCCTTAGGTCCCACTGCTCTCTGATTCAGAACTCAGCTGGGC
CCCGCTCCAGACCCCAGCATTCCTGGTCACTCCCTCCCTAATCTGAGCATCTCTCAAGCTCTTT
ATTAAACTCAATTTGGGTTAGGTTTGGTGGTTCATGCCTATAATCCTAACACTCTGGGAGGCCG
AGGCGGGTGGATCAGTTGAGGTCAGGAGTTTGAGACCAGC

hide sequence

RefSeq Acc Id:

XM_037991572 ⟹ XP_037847500

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666073	8,592,871 - 8,604,490 (-)	NCBI

RefSeq Acc Id:

XM_037991573 ⟹ XP_037847501

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666073	8,592,871 - 8,604,490 (-)	NCBI

RefSeq Acc Id:

XM_037991574 ⟹ XP_037847502

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666073	8,592,871 - 8,607,362 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007994633	(Get FASTA)	NCBI Sequence Viewer
	XP_007994635	(Get FASTA)	NCBI Sequence Viewer
	XP_037847500	(Get FASTA)	NCBI Sequence Viewer
	XP_037847501	(Get FASTA)	NCBI Sequence Viewer
	XP_037847502	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000000641.1

RefSeq Acc Id:	XP_007994633 ⟸ XM_007996442
- Peptide Label:	isoform X4
- UniProtKB:	A0A0D9QWA2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007994635 ⟸ XM_007996444
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9QWA2 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000000641 ⟸ ENSCSAT00000002320

RefSeq Acc Id:	XP_037847502 ⟸ XM_037991574
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_037847501 ⟸ XM_037991573
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_037847500 ⟸ XM_037991572
- Peptide Label:	isoform X1

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000004291	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000002320.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
NCBI Gene	NFKBID	ENTREZGENE
PANTHER	ANKYRIN REPEAT FAMILY A	UniProtKB/TrEMBL
	NF-KAPPA-B INHIBITOR DELTA	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	Ank_5	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
UniProt	A0A0D9QWA2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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