SLC39A12 (solute carrier family 39 member 12)

Gene: SLC39A12 (solute carrier family 39 member 12) Chlorocebus sabaeus

Analyze

Symbol:

SLC39A12

Name:

solute carrier family 39 member 12

RGD ID:

18531337

Description:

ENCODES a protein that exhibits metal ion transmembrane transporter activity (inferred); monoatomic cation:bicarbonate symporter activity (inferred); zinc ion transmembrane transporter activity (inferred); INVOLVED IN positive regulation of sprouting angiogenesis (ortholog); regulation of microtubule polymerization (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypoparathyroidism-deafness-renal disease syndrome (ortholog); Imerslund-Grasbeck Syndrome (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

zinc transporter ZIP12

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	17,887,821 - 17,970,593 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	17,888,748 - 17,970,580 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	23,536,156 - 23,618,931 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

hypoparathyroidism-deafness-renal disease syndrome (ISO)

Imerslund-Grasbeck Syndrome (ISO)

melanoma (ISO)

Pulmonary Hypertension, Hypoxia-Induced (ISO)

Right Ventricular Hypertrophy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bicarbonate transport (IEA)

metal ion transport (IEA)

positive regulation of sprouting angiogenesis (ISO)

regulation of microtubule polymerization (ISO)

regulation of neuron projection development (ISO)

response to decreased oxygen levels (ISO)

signal transduction (ISO)

transmembrane transport (IEA)

zinc ion import across plasma membrane (IEA,ISO)

zinc ion transport (IEA)

Cellular Component

membrane (IEA)

perinuclear region of cytoplasm (ISO)

plasma membrane (ISO)

Molecular Function

metal ion transmembrane transporter activity (IEA)

monoatomic cation:bicarbonate symporter activity (IEA)

zinc ion transmembrane transporter activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SLC39A12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	17,887,821 - 17,970,593 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	17,888,748 - 17,970,580 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	23,536,156 - 23,618,931 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SLC39A12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	17,951,918 - 18,043,285 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	17,951,839 - 18,043,292 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	18,240,847 - 18,332,214 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	18,280,827 - 18,372,218 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	18,280,826 - 18,372,218	NCBI
Celera	10	17,927,289 - 18,018,644 (+)	NCBI		Celera
Cytogenetic Map	10	p12.33	NCBI
HuRef	10	17,906,828 - 17,997,600 (+)	NCBI		HuRef
CHM1_1	10	18,240,775 - 18,332,234 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	17,971,349 - 18,062,603 (+)	NCBI		T2T-CHM13v2.0

Slc39a12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	14,345,476 - 14,499,787 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	14,393,127 - 14,499,788 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	14,388,316 - 14,494,977 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	14,388,316 - 14,494,977 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	14,310,025 - 14,416,604 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	14,306,158 - 14,412,731 (+)	NCBI		MGSCv36	mm8
Celera	2	14,289,501 - 14,395,951 (+)	NCBI		Celera
Cytogenetic Map	2	A2	NCBI
cM Map	2	10.56	NCBI

Slc39a12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	82,262,303 - 82,348,974 (+)	NCBI		GRCr8
mRatBN7.2	17	77,353,761 - 77,440,384 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	77,353,805 - 77,440,353 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	80,811,544 - 80,890,227 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	84,646,963 - 84,725,647 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	78,694,864 - 78,773,553 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	81,455,731 - 81,541,742 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	81,455,955 - 81,541,759 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	83,202,775 - 83,288,616 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	88,525,527 - 88,605,947 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	88,513,119 - 88,616,376 (+)	NCBI
Celera	17	76,696,501 - 76,773,017 (+)	NCBI		Celera
Cytogenetic Map	17	q12.3	NCBI

Slc39a12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	10,052,968 - 10,116,727 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	10,053,022 - 10,116,713 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC39A12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	30,795,318 - 30,888,370 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	30,800,639 - 30,893,691 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	18,270,652 - 18,362,558 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	18,540,473 - 18,699,305 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	18,541,859 - 18,698,851 (+)	Ensembl	panpan1.1		panPan2

SLC39A12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	18,991,734 - 19,064,899 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	18,992,031 - 19,063,647 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	16,093,351 - 16,166,440 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	19,282,840 - 19,356,413 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	19,282,864 - 19,356,389 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	16,483,812 - 16,557,251 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	17,319,092 - 17,392,530 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	17,939,269 - 18,012,769 (-)	NCBI		UU_Cfam_GSD_1.0

Slc39a12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	18,515,301 - 18,580,210 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936520	9,380,650 - 9,444,152 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936520	9,380,723 - 9,444,146 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC39A12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	44,239,274 - 44,320,971 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	44,239,279 - 44,320,974 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	48,973,496 - 49,055,241 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Slc39a12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624796	9,940,176 - 10,008,234 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624796	9,940,228 - 10,008,526 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium
Low	20	12	60
Below cutoff	8	5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008002412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008002413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008002414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008002415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000010685 ⟹ ENSCSAP00000008774

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	9	17,888,748 - 17,970,580 (+)	Ensembl

RefSeq Acc Id:

XM_008002412 ⟹ XP_008000603

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	9	17,887,822 - 17,970,593 (+)	NCBI
Vero_WHO_p1.0	NW_023666051	23,536,157 - 23,618,931 (+)	NCBI

Sequence:

show sequence

AAGATTCCATCTCAAAAAAATAAAAAAGCCTGGAATTTTCTAGGAATATTTGCCTTTGTATTTC
CATCAGTGACCAGCATTCTCTCAGGAACATCCTACCCCATGGCTCCCAGATTTCATATCCAATT
AGTGATGAGGCTAATTATCCTGATCTCGAATTTCCTCTACCTGCCCACCAGCTGACTTAAACCC
CTATACTGTGGGCATGTACTCTTCCCACTCTGAAATCTTAGGATTTAACTTCTCTTGCCTCCTA
GAAAATGAACCACTTTGTTCATTCAGTTATTTACTCACTAATAATTTGTTGAAAGGCTTTGTTT
TGTGGAGCATGAAGGATCTGACATAATAACTCCGACCACTGATGCTGGTGATCACAATATGTGC
AGCTGATTAAAGTTTCTCATTTATACTACCTACTTCCCTGGTAAGAATTTCATTCCTTCAACCA
ATACTTTTCATTTGAAAACATCTCATTACGAAAGCCTTCAATCTTTTAGGCTTCTGCATCTTGC
AAAACAAATAGGGTTCCAAAGAGCCTATCTTTTCAACACATCCTTGGTTTGAGCCTGGATGAAA
CAGTTATTACAGAATCAACCAGAGAGAAAAAAAGATCTTCATCGAACACTAAAGTCTTTCTATT
CTGCGAGGTGAAATCCTTTGACCTAGATTCTGTCCCTTGAAAGGCGAGTGATAGTAGGTGAGCC
TAAGAAAAGTGGTTAAATCTTGATCTAAAAAGTTAAATTCATGAACCACCCTGATTTGATTACC
CTGAAAATCTACCAGACAGAAAGTTCTCCCTTTTATCCACCTTCATTGTTACCTTCAGAGCAGC
TCTCTCCATAGCAACTGAAAACTTTTCTGGCCTGAAATAATCCTCTCTAGCTCCCAGTGCACAG
TCAAAGAATTTTAAAAACAGGGAACTCTGTGACTGTGAAATACTCTCCAGGATTTAAAAGGCTG
TGGAGCTCCAGATAAAGAATCGTTTATCTTTCTTCTGAAGAAATTCCTTTGGTTACAAGTTTAC
CCCGTACACGACAACACACTTATCTCCATCCAAGACAGACTCAAGGTGGAGGAAGCGTGGAAAT
GTGCTTCCAGACAAAGCTTTCAGTATCCTGGGTGCCATTGTTTCTTCTACTCAGCCGTGTTTTT
TCTACTGAGACAGACAAACCCTCAGCCCAGGACAGCAGAGGCCGTGGGAGTTCAGGCCAACTGG
CAGACCTGCTACAGGTTCTCTCTGCTGGTGACCACCCAGCCCACAACCACTCAAGAAGCCTCAT
CAAAACACTGTTGGAGAAAACTGGGTGCCCACGGAGGAGAAACGGAATGCAAGGAGATTGCCAT
CTGTGCTTTGAACCAGATGCACTATTACTAATAGCTGGAGGAAATTTTGAAGATCAGCTTAGAG
AAGAAGTAGTCCAGAGAGTTTCTCTTCTCCTTCTCTATTACATTATTCATCAGGAAGAGATCTG
TTCTTCAAAGCTCAACATGAGTAATAAAGAGTATAAATTTTACCTACATAGCCTACTGAGCCTC
AGGCAGGATGAAGACTCCTCTTTCCTTTCACAGAATGAGACAGAAGATATCTTGGCTTTCACCA
GGCAGTACTTTGACACTTCTCAAAGCCAGTGTATGGAAACCAAAACACTGCAGAAAAAATCTGG
AATAGTGAGCAGTGAAGGTGCTAATGAAAATACACTTCCTCAGTTGGCAGCCACGATCATTACT
TTGTCCCTTCAGGGTGTTTGTCTGGGACAAGGAAACTTGCCTTCCCCAGACTACTTTACAGAAT
ATATTTTCAGTTCCTTGAATCGTACGAATACCCTCCACCTATCAGAACTAGACCAACTCCTCAA
CACTCTCTGGACCAGAAGTACTTGTATCAAAAAGGATAAAATCCATCAACTTCAAAGGAAACAA
AACAGCATAATAACCCCTGATCAAGACTATTCTAATTTCTCTTCATTCATGGACGAAGAGTCTG
AGGATGGCCCAATTTCCTGGGATCAGACTTGCTTCTCTGCTAGGCAGCTGGTGGAGATATTTCT
ACAGAAGAGCCTCTCACCCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGGATCATTCAG
CAACTCCTCAGCTGCTCCTGCCACTTGCCCAAGGACCAACAAGCAAAGCTGCCACCCACCACTC
TGGAGAAATATGGCTACAGCACGGTGGCTGTCACCCTTCTCACACTGGGCTCCATGCTGGGGAC
AGCACTGGTCCTTTTCCACAGCTGTGAGGAGAACTACAGACTTATCTTACAGCTGTTTGTGGGC
TTGGCCGTCGGGACACTGTCTGGGGATGCTCTGCTCCACCTTATCCCTCAGGTTCTTGGTTTAC
ATAAGCAGGAAGCCCCAGAATTTGGGCATCTCCATGAAAGCAAAGGTCATATTTGGAAACTGTT
GGGATTAATTGGAGGCATCCATGGATTTTTCTTGATAGAAAAATGTTTTATGCTTCTTGTATCC
CCAAATGACAAGCAGGGCCTGTCATTGGTTAATGGGCACGTGGGACATTCCCACCATCTTGCAC
TCAACTCTGAATTAAGTGACCAGGCAGGCAGAGGCAAATCTGCTTCAACTATCCAGTTGAAAAG
CCCAGAAGATTCACAGGCAGCTGAAATGCCTATAGGCAGTGTGACAGCCACCAACCGAAAATGT
AAAGTCATTAGCTTGTTAGCAATCATGATTCTGGTTGGAGACAGCCTGCATAATTTTGCAGATG
GCCTAGCCATAGGAGCAGCCTTCTCCTCATCATCCGAGTCAGGAGTGACCACCACGATTGCTAT
CTTGTGTCATGAAATCCCACACGAAATGGGAGACTTTGCTGTGCTCTTAATCTCCGGACTTTCT
ATGAAGACTGCCATCCTGATGAATTTTATAAGTTCCCTAACTGCCTTCATAGGATTATACATTG
GCCTTTCCGTGTCAGCTGATCCATGCGTTCAAGACTGGATCTTCACAGTCACTGCTGGGATGTT
CTTATATTTATCGTTGGTTGAAATGCTTCCTGAAATGACTCATGTTCAAACACAACGACCCTGG
ATGATGTTTCTCCTGCAAAATTTTGGATTGATCCTAGGTTGGCTTTCTCTCCTACTCTTGGCTA
TATATGAGCAAAATATTAAAATATAAGTTAGGATCTTCAACATCTTTCAAAAATGCATTTATAT
AATCTTACTTTGTTTCTTTCATTGCACTCTATAGTGATTTTTAAATTAAGAATTTTTTATCTTA
GGCAAAGTGTGTATCTTTCAATTCATTAACTTATTAATTTTATAATGCAGTTTTATTTTTGGAA
ACATAAATATCAGACCTTCCTTAATTGAAATTTTGTCTTTGGTTTCCAACACCATGATGAAATT
CTTGCTTTTTAAAAAGTAGTTGGTAAATTCTGCATGAATTCTAGTAAATTTTTAAAAAATAGAC
TGTTTCCCTAAGAAAGAATGTTTGTTTGTAGCATTTAAAGGGGACAGATGCCTGTTGGGATAAA
ATCAACTGCTACTTCTTTGATGTTAATTTTTTTTCCCTGTGCAATTATAAACTGTAAGCAAGTT
AAGTGACAAGCAAATGTAATAAAGACTAGTTTTAATATGG

hide sequence

RefSeq Acc Id:

XM_008002414 ⟹ XP_008000605

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	9	17,887,821 - 17,970,593 (+)	NCBI
Vero_WHO_p1.0	NW_023666051	23,536,156 - 23,618,931 (+)	NCBI

Sequence:

show sequence

AAAGATTCCATCTCAAAAAAATAAAAAAGCCTGGAATTTTCTAGGAATATTTGCCTTTGTATTT
CCATCAGTGACCAGCATTCTCTCAGGAACATCCTACCCCATGGCTCCCAGATTTCATATCCAAT
TAGTGATGAGGCTAATTATCCTGATCTCGAATTTCCTCTACCTGCCCACCAGCTGACTTAAACC
CCTATACTGTGGGCATGTACTCTTCCCACTCTGAAATCTTAGGATTTAACTTCTCTTGCCTCCT
AGAAAATGAACCACTTTGTTCATTCAGTTATTTACTCACTAATAATTTGTTGAAAGGCTTTGTT
TTGTGGAGCATGAAGGATCTGACATAATAACTCCGACCACTGATGCTGGTGATCACAATATGTG
CAGCTGATTAAAGTTTCTCATTTATACTACCTACTTCCCTGGTAAGAATTTCATTCCTTCAACC
AATACTTTTCATTTGAAAACATCTCATTACGAAAGCCTTCAATCTTTTAGGCTTCTGCATCTTG
CAAAACAAATAGGGTTCCAAAGAGCCTATCTTTTCAACACATCCTTGGTTTGAGCCTGGATGAA
ACAGTTATTACAGAATCAACCAGAGAGAAAAAAAGATCTTCATCGAACACTAAAGTCTTTCTAT
TCTGCGAGGTGAAATCCTTTGACCTAGATTCTGTCCCTTGAAAGGCGAGTGATAGTAGGTGAGC
CTAAGAAAAGTGGTTAAATCTTGATCTAAAAAGTTAAATTCATGAACCACCCTGATTTGATTAC
CCTGAAAATCTACCAGACAGAAAGTTCTCCCTTTTATCCACCTTCATTGTTACCTTCAGAGCAG
CTCTCTCCATAGCAACTGAAAACTTTTCTGGCCTGAAATAATCCTCTCTAGCTCCCAGTGCACA
GTCAAAGAATTTTAAAAACAGGGAACTCTGTGACTGTGAAATACTCTCCAGGATTTAAAAGGCT
GTGGAGCTCCAGATAAAGAATCGTTTATCTTTCTTCTGAAGAAATTCCTTTGGTTACAAGTTTA
CCCCGTACACGACAACACACTTATCTCCATCCAAGACAGACTCAAGGTGGAGGAAGCGTGGAAA
TGTGCTTCCAGACAAAGCTTTCAGTATCCTGGGTGCCATTGTTTCTTCTACTCAGCCGTGTTTT
TTCTACTGAGACAGACAAACCCTCAGCCCAGGACAGCAGAGGCCGTGGGAGTTCAGGCCAACTG
GCAGACCTGCTACAGGTTCTCTCTGCTGGTGACCACCCAGCCCACAACCACTCAAGAAGCCTCA
TCAAAACACTGTTGGAGAAAACTGGGTGCCCACGGAGGAGAAACGGAATGCAAGGAGATTGCCA
TCTGTGCTTTGAACCAGATGCACTATTACTAATAGCTGGAGGAAATTTTGAAGATCAGCTTAGA
GAAGAAGTAGTCCAGAGAGTTTCTCTTCTCCTTCTCTATTACATTATTCATCAGGAAGAGATCT
GTTCTTCAAAGCTCAACATGAGTAATAAAGAGTATAAATTTTACCTACATAGCCTACTGAGCCT
CAGGCAGGATGAAGACTCCTCTTTCCTTTCACAGAATGAGACAGAAGATATCTTGGCTTTCACC
AGGCAGTACTTTGACACTTCTCAAAGCCAGTGTATGGAAACCAAAACACTGCAGAAAAAATCTG
GAATAGTGAGCAGTGAAGGTGCTAATGAAAATACACTTCCTCAGTTGGCAGCCACGATCATTAC
TTTGTCCCTTCAGGGTGTTTGTCTGGGACAAGGAAACTTGCCTTCCCCAGACTACTTTACAGAA
TATATTTTCAGTTCCTTGAATCGTACGAATACCCTCCACCTATCAGAACTAGACCAACTCCTCA
ACACTCTCTGGACCAGAAGTACTTGTATCAAAAAGGATAAAATCCATCAACTTCAAAGGAAACA
AAACAGCATAATAACCCCTGATCAAGACTATTCTAATTTCTCTTCATTCATGGACGAAGAGTCT
GAGGATGGCCCAATTTCCTGGGATCAGACTTGCTTCTCTGCTAGGCAGCTGGTGGAGATATTTC
TACAGAAGAGCCTCTCACCCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGGATCATTCA
GCAACTCCTCAGCTGCTCCTGCCACTTGCCCAAGGACCAACAAGCAAAGCTGCCACCCACCACT
CTGGAGAAATATGGCTACAGCACGGTGGCTGTCACCCTTCTCACACTGGGCTCCATGCTGGGGA
CAGCACTGGTCCTTTTCCACAGCTGTGAGGAGAACTACAGACTTATCTTACAGCTGTTTGTGGG
CTTGGCCGTCGGGACACTGTCTGGGGATGCTCTGCTCCACCTTATCCCTCAGGTTCTTGGTTTA
CATAAGCAGGAAGCCCCAGAATTTGGGCATCTCCATGAAAGCAAAGGTCATATTTGGAAACTGT
TGGGATTAATTGGAGGCATCCATGGATTTTTCTTGATAGAAAAATGTTTTATGCTTCTTGTATC
CCCAAATGACAAGGGCCTGTCATTGGTTAATGGGCACGTGGGACATTCCCACCATCTTGCACTC
AACTCTGAATTAAGTGACCAGGCAGGCAGAGGCAAATCTGCTTCAACTATCCAGTTGAAAAGCC
CAGAAGATTCACAGGCAGCTGAAATGCCTATAGGCAGTGTGACAGCCACCAACCGAAAATGTAA
AGTCATTAGCTTGTTAGCAATCATGATTCTGGTTGGAGACAGCCTGCATAATTTTGCAGATGGC
CTAGCCATAGGAGCAGCCTTCTCCTCATCATCCGAGTCAGGAGTGACCACCACGATTGCTATCT
TGTGTCATGAAATCCCACACGAAATGGGAGACTTTGCTGTGCTCTTAATCTCCGGACTTTCTAT
GAAGACTGCCATCCTGATGAATTTTATAAGTTCCCTAACTGCCTTCATAGGATTATACATTGGC
CTTTCCGTGTCAGCTGATCCATGCGTTCAAGACTGGATCTTCACAGTCACTGCTGGGATGTTCT
TATATTTATCGTTGGTTGAAATGCTTCCTGAAATGACTCATGTTCAAACACAACGACCCTGGAT
GATGTTTCTCCTGCAAAATTTTGGATTGATCCTAGGTTGGCTTTCTCTCCTACTCTTGGCTATA
TATGAGCAAAATATTAAAATATAAGTTAGGATCTTCAACATCTTTCAAAAATGCATTTATATAA
TCTTACTTTGTTTCTTTCATTGCACTCTATAGTGATTTTTAAATTAAGAATTTTTTATCTTAGG
CAAAGTGTGTATCTTTCAATTCATTAACTTATTAATTTTATAATGCAGTTTTATTTTTGGAAAC
ATAAATATCAGACCTTCCTTAATTGAAATTTTGTCTTTGGTTTCCAACACCATGATGAAATTCT
TGCTTTTTAAAAAGTAGTTGGTAAATTCTGCATGAATTCTAGTAAATTTTTAAAAAATAGACTG
TTTCCCTAAGAAAGAATGTTTGTTTGTAGCATTTAAAGGGGACAGATGCCTGTTGGGATAAAAT
CAACTGCTACTTCTTTGATGTTAATTTTTTTTCCCTGTGCAATTATAAACTGTAAGCAAGTTAA
GTGACAAGCAAATGTAATAAAGACTAGTTTTAATATGG

hide sequence

RefSeq Acc Id:

XM_008002415 ⟹ XP_008000606

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	9	17,887,822 - 17,970,593 (+)	NCBI
Vero_WHO_p1.0	NW_023666051	23,536,158 - 23,618,929 (+)	NCBI

Sequence:

show sequence

AAGATTCCATCTCAAAAAAATAAAAAAGCCTGGAATTTTCTAGGAATATTTGCCTTTGTATTTC
CATCAGTGACCAGCATTCTCTCAGGAACATCCTACCCCATGGCTCCCAGATTTCATATCCAATT
AGTGATGAGGCTAATTATCCTGATCTCGAATTTCCTCTACCTGCCCACCAGCTGACTTAAACCC
CTATACTGTGGGCATGTACTCTTCCCACTCTGAAATCTTAGGATTTAACTTCTCTTGCCTCCTA
GAAAATGAACCACTTTGTTCATTCAGTTATTTACTCACTAATAATTTGTTGAAAGGCTTTGTTT
TGTGGAGCATGAAGGATCTGACATAATAACTCCGACCACTGATGCTGGTGATCACAATATGTGC
AGCTGATTAAAGTTTCTCATTTATACTACCTACTTCCCTGGTAAGAATTTCATTCCTTCAACCA
ATACTTTTCATTTGAAAACATCTCATTACGAAAGCCTTCAATCTTTTAGGCTTCTGCATCTTGC
AAAACAAATAGGGTTCCAAAGAGCCTATCTTTTCAACACATCCTTGGTTTGAGCCTGGATGAAA
CAGTTATTACAGAATCAACCAGAGAGAAAAAAAGATCTTCATCGAACACTAAAGTCTTTCTATT
CTGCGAGGTGAAATCCTTTGACCTAGATTCTGTCCCTTGAAAGGCGAGTGATAGTAGGTGAGCC
TAAGAAAAGTGGTTAAATCTTGATCTAAAAAGTTAAATTCATGAACCACCCTGATTTGATTACC
CTGAAAATCTACCAGACAGAAAGTTCTCCCTTTTATCCACCTTCATTGTTACCTTCAGAGCAGC
TCTCTCCATAGCAACTGAAAACTTTTCTGGCCTGAAATAATCCTCTCTAGCTCCCAGTGCACAG
TCAAAGAATTTTAAAAACAGGGAACTCTGTGACTGTGAAATACTCTCCAGGATTTAAAAGGCTG
TGGAGCTCCAGATAAAGAATCGTTTATCTTTCTTCTGAAGAAATTCCTTTGGTTACAAGTTTAC
CCCGTACACGACAACACACTTATCTCCATCCAAGACAGACTCAAGGTGGAGGAAGCGTGGAAAT
GTGCTTCCAGACAAAGCTTTCAGTATCCTGGGTGCCATTGTTTCTTCTACTCAGCCGTGTTTTT
TCTACTGAGACAGACAAACCCTCAGCCCAGGACAGCAGAGGCCGTGGGAGTTCAGGCCAACTGG
CAGACCTGCTACAGGTTCTCTCTGCTGGTGACCACCCAGCCCACAACCACTCAAGAAGCCTCAT
CAAAACACTGTTGGAGAAAACTGGGTGCCCACGGAGGAGAAACGGAATGCAAGGAGATTGCCAT
CTGTGCTTTGAACCAGATGCACTATTACTAATAGCTGGAGGAAATTTTGAAGATCAGCTTAGAG
AAGAAGTAGTCCAGAGAGTTTCTCTTCTCCTTCTCTATTACATTATTCATCAGGAAGAGATCTG
TTCTTCAAAGCTCAACATGAGTAATAAAGAGTATAAATTTTACCTACATAGCCTACTGAGCCTC
AGGCAGGATGAAGACTCCTCTTTCCTTTCACAGAATGAGACAGAAGATATCTTGGCTTTCACCA
GGCAGTACTTTGACACTTCTCAAAGCCAGTGTATGGAAACCAAAACACTGCAGAAAAAATCTGG
AATAGTGAGCAGTGAAGGTGCTAATGAAAATACACTTCCTCAGTTGGCAGCCACGATCATTACT
TTGTCCCTTCAGGGTGTTTGTCTGGGACAAGGAAACTTGCCTTCCCCAGACTACTTTACAGAAT
ATATTTTCAGTTCCTTGAATCGTACGAATACCCTCCACCTATCAGAACTAGACCAACTCCTCAA
CACTCTCTGGACCAGAAGTACTTGTATCAAAAAGGATAAAATCCATCAACTTCAAAGGAAACAA
AACAGCATAATAACCCCTGATCAAGACTATTCTAATTTCTCTTCATTCATGGACGAAGAGTCTG
AGGATGGCCCAATTTCCTGGGATCAGACTTGCTTCTCTGCTAGGCAGCTGGTGGAGATATTTCT
ACAGAAGAGCCTCTCACCCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGGATCATTCAG
CAACTCCTCAGCTGCTCCTGCCACTTGCCCAAGGACCAACAAGCAAAGCTGCCACCCACCACTC
TGGAGAAATATGGCTACAGCACGGTGGCTGTCACCCTTCTCACACTGGGCTCCATGCTGGGGAC
AGCACTGGTCCTTTTCCACAGCTGTGAGGAGAACTACAGACTTATCTTACAGCTGTTTGTGGGC
TTGGCCGTCGGGACACTGTCTGGGGATGCTCTGCTCCACCTTATCCCTCAGGTTCTTGGTTTAC
ATAAGCAGGAAGCCCCAGAATTTGGGCATCTCCATGAAAGCAAAGGTCATATTTGGAAACTGTT
GGGATTAATTGGAGGCATCCATGGATTTTTCTTGATAGAAAAATGTTTTATGCTTCTTGTATCC
CCAAATGACAAGAAAAGCCCAGAAGATTCACAGGCAGCTGAAATGCCTATAGGCAGTGTGACAG
CCACCAACCGAAAATGTAAAGTCATTAGCTTGTTAGCAATCATGATTCTGGTTGGAGACAGCCT
GCATAATTTTGCAGATGGCCTAGCCATAGGAGCAGCCTTCTCCTCATCATCCGAGTCAGGAGTG
ACCACCACGATTGCTATCTTGTGTCATGAAATCCCACACGAAATGGGAGACTTTGCTGTGCTCT
TAATCTCCGGACTTTCTATGAAGACTGCCATCCTGATGAATTTTATAAGTTCCCTAACTGCCTT
CATAGGATTATACATTGGCCTTTCCGTGTCAGCTGATCCATGCGTTCAAGACTGGATCTTCACA
GTCACTGCTGGGATGTTCTTATATTTATCGTTGGTTGAAATGCTTCCTGAAATGACTCATGTTC
AAACACAACGACCCTGGATGATGTTTCTCCTGCAAAATTTTGGATTGATCCTAGGTTGGCTTTC
TCTCCTACTCTTGGCTATATATGAGCAAAATATTAAAATATAAGTTAGGATCTTCAACATCTTT
CAAAAATGCATTTATATAATCTTACTTTGTTTCTTTCATTGCACTCTATAGTGATTTTTAAATT
AAGAATTTTTTATCTTAGGCAAAGTGTGTATCTTTCAATTCATTAACTTATTAATTTTATAATG
CAGTTTTATTTTTGGAAACATAAATATCAGACCTTCCTTAATTGAAATTTTGTCTTTGGTTTCC
AACACCATGATGAAATTCTTGCTTTTTAAAAAGTAGTTGGTAAATTCTGCATGAATTCTAGTAA
ATTTTTAAAAAATAGACTGTTTCCCTAAGAAAGAATGTTTGTTTGTAGCATTTAAAGGGGACAG
ATGCCTGTTGGGATAAAATCAACTGCTACTTCTTTGATGTTAATTTTTTTTCCCTGTGCAATTA
TAAACTGTAAGCAAGTTAAGTGACAAGCAAATGTAATAAAGACTAGTTTTAATATGG

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Protein Sequences


Protein RefSeqs	XP_008000603	(Get FASTA)	NCBI Sequence Viewer
	XP_008000605	(Get FASTA)	NCBI Sequence Viewer
	XP_008000606	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000008774.1

RefSeq Acc Id:	XP_008000605 ⟸ XM_008002414
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RJI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008000603 ⟸ XM_008002412
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RJI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008000606 ⟸ XM_008002415
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RJI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000008774 ⟸ ENSCSAT00000010685

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000012595	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000010685.1	UniProtKB/TrEMBL
InterPro	ZIP	UniProtKB/TrEMBL
	ZIP4_12_EF-hand	UniProtKB/TrEMBL
	ZIP4_N	UniProtKB/TrEMBL
KEGG Report	csab:103237963	UniProtKB/TrEMBL
NCBI Gene	SLC39A12	ENTREZGENE
PANTHER	SOLUTE CARRIER FAMILY 39	UniProtKB/TrEMBL
	ZINC TRANSPORTER ZIP12	UniProtKB/TrEMBL
Pfam	EF-hand_Zip	UniProtKB/TrEMBL
	Zip	UniProtKB/TrEMBL
	ZIP4_domain	UniProtKB/TrEMBL
UniProt	A0A0D9RJI5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD