PGPEP1L (pyroglutamyl-peptidase I like) - Rat Genome Database

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Gene: PGPEP1L (pyroglutamyl-peptidase I like) Chlorocebus sabaeus
Analyze
Symbol: PGPEP1L
Name: pyroglutamyl-peptidase I like
RGD ID: 18525183
Description: ASSOCIATED WITH chromosome 15q26-qter deletion syndrome (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12917,537,895 - 17,587,521 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605929,023,255 - 29,048,453 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PGPEP1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12917,537,895 - 17,587,521 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605929,023,255 - 29,048,453 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
PGPEP1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381598,968,229 - 99,007,792 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1598,968,229 - 99,007,792 (-)EnsemblGRCh38hg38GRCh38
GRCh371599,511,458 - 99,551,021 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361597,329,032 - 97,366,314 (-)NCBINCBI36Build 36hg18NCBI36
Celera1575,928,408 - 75,967,924 (-)NCBICelera
Cytogenetic Map15q26.3NCBI
HuRef1575,638,931 - 75,678,446 (-)NCBIHuRef
CHM1_11599,352,875 - 99,392,437 (-)NCBICHM1_1
T2T-CHM13v2.01596,732,626 - 96,772,141 (-)NCBIT2T-CHM13v2.0
Pgpep1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39767,881,154 - 67,914,232 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl767,886,358 - 67,913,981 (-)EnsemblGRCm39 Ensembl
GRCm38768,235,521 - 68,264,484 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl768,236,610 - 68,264,233 (-)EnsemblGRCm38mm10GRCm38
MGSCv37775,381,494 - 75,409,119 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36768,110,123 - 68,137,746 (-)NCBIMGSCv36mm8
Celera765,693,201 - 65,721,158 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map737.47NCBI
Pgpep1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81131,247,280 - 131,278,481 (-)NCBIGRCr8
mRatBN7.21121,835,243 - 121,868,368 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1121,840,697 - 121,869,407 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01129,216,221 - 129,244,664 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1129,216,152 - 129,217,058 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01130,273,933 - 130,302,611 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41122,999,105 - 123,010,778 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1114,038,502 - 114,067,153 (-)NCBICelera
Cytogenetic Map1q22NCBI
Pgpep1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541626,069,466 - 26,094,419 (+)NCBIChiLan1.0ChiLan1.0
PGPEP1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21688,509,202 - 88,548,594 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11592,206,720 - 92,350,475 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01577,651,265 - 77,791,570 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11596,836,590 - 96,877,575 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1596,836,590 - 96,839,587 (-)Ensemblpanpan1.1panPan2
PGPEP1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1342,101,055 - 42,150,367 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl342,098,609 - 42,146,623 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha344,791,584 - 44,850,067 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0342,500,856 - 42,559,442 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1342,025,366 - 42,083,858 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0342,256,272 - 42,310,921 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0342,476,154 - 42,534,677 (-)NCBIUU_Cfam_GSD_1.0
PGPEP1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1137,308,438 - 137,380,864 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11137,307,784 - 137,384,465 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21153,438,767 - 153,511,366 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pgpep1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247685,691,436 - 5,707,956 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_037987739   ⟹   XP_037843667
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605929,023,255 - 29,048,453 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037843667 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_037843667   ⟸   XM_037987739


Additional Information

Database Acc Id Source(s)
NCBI Gene PGPEP1L ENTREZGENE