LUC7L (LUC7 like) - Rat Genome Database

Name: LUC7L
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: LUC7L (LUC7 like) Chlorocebus sabaeus

Analyze

Symbol:

LUC7L

Name:

LUC7 like

RGD ID:

18513512

Description:

ENCODES a protein that exhibits RS domain binding (ortholog); INVOLVED IN negative regulation of striated muscle tissue development (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); idiopathic generalized epilepsy (ortholog); FOUND IN nucleus (inferred); U1 snRNP (inferred); U2-type prespliceosome (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

putative RNA-binding protein Luc7-like 1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LUC7L (LUC7 like)	NCBI	Ortholog
Mus musculus (house mouse):	Luc7l (Luc7-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Luc7l (LUC7-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Luc7l (LUC7 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LUC7L (LUC7 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LUC7L (LUC7 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Luc7l (LUC7 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LUC7L (LUC7 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Luc7l (LUC7 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	132,018 - 176,060 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	128,232 - 176,020 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	31,010,060 - 31,053,221 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

epilepsy (ISO)

genetic disease (ISO)

idiopathic generalized epilepsy (ISO)

short-rib thoracic dysplasia 9 with or without polydactyly (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA processing (IEA)

mRNA splice site recognition (IEA)

negative regulation of striated muscle tissue development (ISO)

RNA splicing (IEA)

Cellular Component

nucleus (IEA)

U1 snRNP (IEA)

U2-type prespliceosome (IEA)

Molecular Function

identical protein binding (IEA)

mRNA binding (IEA)

protein binding (ISO)

RS domain binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

LUC7L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	132,018 - 176,060 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	128,232 - 176,020 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	31,010,060 - 31,053,221 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

LUC7L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	188,990 - 229,449 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	188,969 - 229,463 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	238,989 - 279,448 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	178,971 - 219,450 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	178,974 - 219,450	NCBI
Celera	16	437,860 - 478,332 (-)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	156,536 - 196,987 (-)	NCBI		HuRef
CHM1_1	16	238,912 - 279,378 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	182,837 - 223,275 (-)	NCBI		T2T-CHM13v2.0

Luc7l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	26,471,874 - 26,504,484 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	26,471,870 - 26,504,478 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	26,252,899 - 26,285,510 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	26,252,896 - 26,285,504 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	26,389,855 - 26,422,449 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	25,980,551 - 26,009,568 (+)	NCBI		MGSCv36	mm8
Celera	17	26,787,083 - 26,820,005 (+)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	13.09	NCBI

Luc7l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	15,777,837 - 15,811,586 (+)	NCBI		GRCr8
mRatBN7.2	10	15,273,340 - 15,307,131 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	15,273,348 - 15,303,112 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	20,017,433 - 20,048,112 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	19,506,315 - 19,536,997 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	15,001,288 - 15,031,087 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	15,538,878 - 15,572,651 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	15,538,872 - 15,568,638 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	15,434,018 - 15,467,745 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	15,522,334 - 15,549,100 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	15,523,381 - 15,550,147 (+)	NCBI
Celera	10	14,942,376 - 14,969,587 (+)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

Luc7l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	16,965,788 - 16,997,329 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	16,965,788 - 16,997,329 (+)	NCBI	ChiLan1.0	ChiLan1.0

LUC7L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	403,094 - 443,370 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	4,196,025 - 4,236,318 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	16	177,857 - 217,524 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	177,857 - 217,519 (-)	Ensembl	panpan1.1		panPan2

LUC7L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	40,274,290 - 40,310,084 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	40,273,801 - 40,309,921 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	41,537,095 - 41,572,894 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	40,616,502 - 40,652,360 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	40,616,511 - 40,652,360 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	40,304,768 - 40,340,566 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	40,265,757 - 40,301,559 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	40,744,252 - 40,780,083 (+)	NCBI		UU_Cfam_GSD_1.0

Luc7l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	112,589,490 - 112,624,860 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	687,036 - 722,919 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	687,352 - 722,720 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LUC7L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	41,449,002 - 41,470,977 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	41,442,127 - 41,473,115 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	40,960,784 - 40,991,229 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Luc7l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624913	1,045,658 - 1,075,538 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624913	1,047,942 - 1,075,588 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36		55
Low		20	5
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007979790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037990087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037990088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_494426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000011187 ⟹ ENSCSAP00000009267

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	5	128,232 - 176,020 (-)	Ensembl

RefSeq Acc Id:

XM_007979790 ⟹ XP_007977981

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	132,018 - 176,054 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	31,010,078 - 31,053,221 (+)	NCBI

Sequence:

show sequence

AAAGAGCCGAGTGGGCTCGAGGCCGACGCGACCATCATTTGTCGACGCCGCTGCCGCTGCCTGC
CTGAGAGAGGCCGTCGCGGCCGTCCCCACCGCCTCCGCCGGCTACCATGTCCGCCCAGGCGCAG
ATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGAGACGAAACCAGACAGAGGG
TCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCCACATGACATCCT
CGCTGGGACGCGCATGGATTTAGGAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGAT
TATGAGATTGCAAGTAAAGAAAGAGACCTGTTTTTTGAATTGGATGCAATGGATCACTTGGAGT
CCTTTATTGCGGAATGTGATCGGAGAACTGAGCTCGCCAAGAAACGGCTGGCAGAAACACAGGA
GGAAATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAGTTAAATGAAGAAATAGGA
AAACTCCTTGCTAAAGCCGAACAGCTAGGGGCTGAAGGTAACGTGGATGAATCCCAGAAGATTC
TTATGGAGGTGGAAAAAGTTCGTGCGAAGAAAAAAGAAGCTGAGGAAGAATACAGAAATTCCAT
GCCTGCGTCCAGTTTTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCAGCCTACCTTGGT
CTCCATGACAACGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCATTC
AGATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGTCGCTGAAAAGCAGGAGAAGAGAAATCA
GGATCGCTTGAGGAGGAGAGAGGAGAGGGAGCGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCA
AGAACCAGAGATCGCAGGAGGTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCT
CCCGAGAGCGACGGAAGTTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCG
TTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGGAGTGCGAAATACAAGTTC
TCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGG
ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCGGAAGAGAAGGAGGCCGG
CGAGATCTGAACCCGTCTCCTGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAAT
TACCCTTTATATTTGCTGAATACAACTCATCTTTTGTAGTTTAAAATTTCTATTGTTTTGGAGC
TAGCTGTGAGTTTCTAGAATTGTACAGAGTTGCTCCTGTGTTCTGGGGTCATGTTGAGTAGGAA
TAAATGAATCTGACGACTGCCTCCTGAGGCTGCA

hide sequence

RefSeq Acc Id:

XM_007979801 ⟹ XP_007977992

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	132,018 - 176,055 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	31,010,078 - 31,053,221 (+)	NCBI

Sequence:

show sequence

GAAAGAGCCGAGTGGGCTCGAGGCCGACGCGACCATCATTTGTCGACGCCGCTGCCGCTGCCTG
CCTGAGAGAGGCCGTCGCGGCCGTCCCCACCGCCTCCGCCGGCTACCATGTCCGCCCAGGCGCA
GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGAGACGAAACCAGACAGAGG
GTCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCCACATGACATCC
TCGCTGGGACGCGCATGGATTTAGGAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGA
TTATGAGATTGCAAGTAAAGAAAGAGACCTGTTTTTTGAATTGGATGCAATGGATCACTTGGAG
TCCTTTATTGCGGAATGTGATCGGAGAACTGAGCTCGCCAAGAAACGGCTGGCAGAAACACAGG
AGGAAATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAGTTAAATGAAGAAATAGG
AAAACTCCTTGCTAAAGCCGAACAGCTAGGGGCTGAAGGTAACGTGGATGAATCCCAGAAGATT
CTTATGGAGGTGGAAAAAGTTCGTGCGAAGAAAAAAGAAGCTGAGGAAGAATACAGAAATTCCA
TGCCTGCGTCCAGTTTTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCAGCCTACCTTGG
TCTCCATGACAACGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCATT
CAGATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGTCGCTGAAAAGCAGGAGAAGAGAAATC
AGGATCGCTTGAGGAGGAGAGAGGAGAGGGAGCGGGAGGAGCGTCTGAGCAGGAGGTCACGCTC
CCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAGTTGTCCCGGTCC
CGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTC
GGGCTTCCCGGGACCGGAGTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTC
CTGGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAG
ATGGCTTCACGGAGGTCGGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCTGGGTGCTG
TAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTATATTTGCTGAATACAACTCA
TCTTTTGTAGTTTAAAATTTCTATTGTTTTGGAGCTAGCTGTGAGTTTCTAGAATTGTACAGAG
TTGCTCCTGTGTTCTGGGGTCATGTTGAGTAGGAATAAATGAATCTGACGACTGCCTCCTGAGG
CTGCA

hide sequence

RefSeq Acc Id:

XM_007979808 ⟹ XP_007977999

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	132,018 - 176,055 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	31,010,078 - 31,053,221 (+)	NCBI

Sequence:

show sequence

GAAAGAGCCGAGTGGGCTCGAGGCCGACGCGACCATCATTTGTCGACGCCGCTGCCGCTGCCTG
CCTGAGAGAGGCCGTCGCGGCCGTCCCCACCGCCTCCGCCGGCTACCATGTCCGCCCAGGCGCA
GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGAGACGAAACCAGACAGAGG
GTCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCCACATGACATCC
TCGCTGGGACGCGCATGGATTTAGGAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGA
TTATGAGATTGCAAGTAAAGAAAGAGACCTGTTTTTTGAATTGGATGCAATGGATCACTTGGAG
TCCTTTATTGCGGAATGTGATCGGAGAACTGAGCTCGCCAAGAAACGGCTGGCAGAAACACAGG
AGGAAATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAGTTAAATGAAGAAATAGG
AAAACTCCTTGCTAAAGCCGAACAGCTAGGGGCTGAAGGTAACGTGGATGAATCCCAGAAGATT
CTTATGGAGGTGGAAAAAGTTCGTGCGAAGAAAAAAGAAGCTGAGGAAGAATACAGAAATTCCA
TGCCTGCGTCCAGTTTTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCAGCCTACCTTGG
TCTCCATGACAACGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCATT
CAGATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGTCGCTGAAAAGCAGGAGAAGAGAAATC
AGGATCGCTTGAGGAGGAGAGAGGAGAGGGAGCGGGAGGAGCGTCTGAGCAGGAGGTCGGGATC
AAGAACCAGAGATCGCAGGAGGTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACC
TCCCGAGAGCGACGGAAGTTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCC
GTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGGAGTGCGAAATACAAGTA
ACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCAGAGAGGA
GTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGG
AAGATGGCTTCACGGAGGTCGGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCTGGGTG
CTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTATATTTGCTGAATACAAC
TCATCTTTTGTAGTTTAAAATTTCTATTGTTTTGGAGCTAGCTGTGAGTTTCTAGAATTGTACA
GAGTTGCTCCTGTGTTCTGGGGTCATGTTGAGTAGGAATAAATGAATCTGACGACTGCCTCCTG
AGGCTGCA

hide sequence

RefSeq Acc Id:

XM_007979819 ⟹ XP_007978010

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	132,018 - 176,060 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	31,010,088 - 31,053,221 (+)	NCBI

Sequence:

show sequence

GGCGGGAAAGAGCCGAGTGGGCTCGAGGCCGACGCGACCATCATTTGTCGACGCCGCTGCCGCT
GCCTGCCTGAGAGAGGCCGTCGCGGCCGTCCCCACCGCCTCCGCCGGCTACCATGTCCGCCCAG
GCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGTTCAGTGTATCTTT
GCCTGCCTACATCAATCTGCAAGGGAGTTGCAGAAAGCCTCATGTTCATCGAGCCGAGACGAAA
CCAGACAGAGGGTCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCC
ACATGACATCCTCGCTGGGACGCGCATGGATTTAGGAGAATGTACCAAAATCCACGACTTGGCC
CTCCGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGACCTGTTTTTTGAATTGGATGCAATGG
ATCACTTGGAGTCCTTTATTGCGGAATGTGATCGGAGAACTGAGCTCGCCAAGAAACGGCTGGC
AGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAGTTAAAT
GAAGAAATAGGAAAACTCCTTGCTAAAGCCGAACAGCTAGGGGCTGAAGGTAACGTGGATGAAT
CCCAGAAGATTCTTATGGAGGTGGAAAAAGTTCGTGCGAAGAAAAAAGAAGCTGAGGAAGAATA
CAGAAATTCCATGCCTGCGTCCAGTTTTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCA
GCCTACCTTGGTCTCCATGACAACGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACT
TGGGGTTCATTCAGATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGTCGCTGAAAAGCAGGA
GAAGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAGCGGGAGGAGCGTCTGAGCAGG
AGGTCGGGATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCCGGGATCGGCGTCGGAGGCGGT
CAAGATCTACCTCCCGAGAGCGACGGAAGTTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCG
CCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGGAGTGCG
AAATACAAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGC
GAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCGGAAGA
GAAGGAGGCCGGCGAGATCTGAACCCGTCTCCTGGGTGCTGTAAATAGTCTGATAAACGTTCAC
ACAGTCTAAAATTACCCTTTATATTTGCTGAATACAACTCATCTTTTGTAGTTTAAAATTTCTA
TTGTTTTGGAGCTAGCTGTGAGTTTCTAGAATTGTACAGAGTTGCTCCTGTGTTCTGGGGTCAT
GTTGAGTAGGAATAAATGAATCTGACGACTGCCTCCTGAGGCTGCA

hide sequence

RefSeq Acc Id:

XM_037990087 ⟹ XP_037846015

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666068	31,010,060 - 31,053,221 (+)	NCBI

RefSeq Acc Id:

XM_037990088 ⟹ XP_037846016

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666068	31,010,060 - 31,053,221 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007977981	(Get FASTA)	NCBI Sequence Viewer
	XP_007977992	(Get FASTA)	NCBI Sequence Viewer
	XP_007977999	(Get FASTA)	NCBI Sequence Viewer
	XP_007978010	(Get FASTA)	NCBI Sequence Viewer
	XP_037846015	(Get FASTA)	NCBI Sequence Viewer
	XP_037846016	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000009267.1

RefSeq Acc Id:	XP_007978010 ⟸ XM_007979819
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_007977992 ⟸ XM_007979801
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007977999 ⟸ XM_007979808
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_007977981 ⟸ XM_007979790
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSCSAP00000009267 ⟸ ENSCSAT00000011187

RefSeq Acc Id:	XP_037846016 ⟸ XM_037990088
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_037846015 ⟸ XM_037990087
- Peptide Label:	isoform X4

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000013092	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000011187.1	UniProtKB/TrEMBL
InterPro	Luc7-rel	UniProtKB/TrEMBL
KEGG Report	csab:103225269	UniProtKB/TrEMBL
NCBI Gene	LUC7L	ENTREZGENE
PANTHER	PTHR12375	UniProtKB/TrEMBL
	RNA-BINDING PROTEIN LUC7-LIKE 1-RELATED	UniProtKB/TrEMBL
Pfam	LUC7	UniProtKB/TrEMBL
UniProt	A0A0D9RKX8_CHLSB	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar