ACRV1 (acrosomal vesicle protein 1)

Gene: ACRV1 (acrosomal vesicle protein 1) Chlorocebus sabaeus

Analyze

Symbol:

ACRV1

Name:

acrosomal vesicle protein 1

RGD ID:

18507905

Description:

ASSOCIATED WITH Chromosome 11, Partial Trisomy 11q (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN acrosomal vesicle (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

acrosomal protein SP-10

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	116,812,667 - 116,821,625 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	116,812,726 - 116,821,073 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	9,249,490 - 9,258,435 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chromosome 11, Partial Trisomy 11q (ISO)

Dwarfism (ISO)

genetic disease (ISO)

holoprosencephaly 11 (ISO)

Jacobsen Syndrome (ISO)

prostate cancer (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

acrosomal vesicle (IEA)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

ACRV1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	116,812,667 - 116,821,625 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	116,812,726 - 116,821,073 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	9,249,490 - 9,258,435 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ACRV1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	125,671,522 - 125,680,847 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	125,671,522 - 125,680,874 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	125,541,417 - 125,550,742 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	125,047,439 - 125,056,152 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	125,047,439 - 125,056,152	NCBI
Celera	11	122,702,479 - 122,711,196 (-)	NCBI		Celera
Cytogenetic Map	11	q24.2	ENTREZGENE
HuRef	11	121,483,607 - 121,492,216 (-)	NCBI		HuRef
CHM1_1	11	125,428,367 - 125,436,930 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	125,700,163 - 125,709,487 (-)	NCBI		T2T-CHM13v2.0

Acrv1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	36,604,550 - 36,610,139 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	36,604,516 - 36,610,139 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	36,693,220 - 36,698,845 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	36,693,220 - 36,698,843 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	36,500,805 - 36,506,422 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	36,442,921 - 36,448,515 (+)	NCBI		MGSCv36	mm8
Celera	9	33,896,072 - 33,901,689 (+)	NCBI		Celera
Cytogenetic Map	9	A4	NCBI
cM Map	9	20.67	NCBI

Acrv1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	44,593,246 - 44,598,823 (+)	NCBI		GRCr8
mRatBN7.2	8	36,404,394 - 36,409,971 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	36,404,394 - 36,424,959 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	40,413,540 - 40,419,115 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	38,696,596 - 38,702,171 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	36,559,482 - 36,565,057 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	39,164,991 - 39,170,568 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	39,164,916 - 39,170,736 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	39,167,849 - 39,173,426 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	37,938,151 - 37,943,728 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	37,946,916 - 37,952,494 (+)	NCBI
Celera	8	38,031,165 - 38,036,742 (-)	NCBI		Celera
Cytogenetic Map	8	q22	NCBI

Acrv1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	26,655,208 - 26,664,888 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	26,654,980 - 26,664,989 (-)	NCBI	ChiLan1.0	ChiLan1.0

ACRV1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	126,355,146 - 126,571,963 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	127,466,768 - 127,679,517 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	120,493,328 - 120,502,632 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	124,406,467 - 124,415,043 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	124,406,467 - 124,415,043 (-)	Ensembl	panpan1.1		panPan2

ACRV1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	8,844,035 - 8,850,557 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	8,846,834 - 8,850,567 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	8,889,045 - 8,895,554 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	8,786,609 - 8,793,131 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	8,786,621 - 8,793,141 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	8,856,314 - 8,862,816 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	8,826,217 - 8,832,727 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	8,862,816 - 8,869,330 (+)	NCBI		UU_Cfam_GSD_1.0

Acrv1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	107,799,566 - 107,806,117 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936743	2,047,383 - 2,053,589 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACRV1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	52,803,381 - 52,809,975 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	52,803,378 - 52,809,975 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	58,456,597 - 58,463,195 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Acrv1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624927	1,645,923 - 1,653,291 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium
Low		14	10
Below cutoff	10	5	39

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008021400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008021401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000000307 ⟹ ENSCSAP00000015748

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	1	116,812,726 - 116,821,073 (-)	Ensembl

RefSeq Acc Id:

XM_008021400 ⟹ XP_008019591

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	116,812,667 - 116,821,624 (-)	NCBI
Vero_WHO_p1.0	NW_023666043	9,249,490 - 9,258,435 (+)	NCBI

Sequence:

show sequence

TCCAATTTCTCTCTCTTTCTCCCCATTCCTCCCTTCCCTCTTCCTCTCCCTCTCTCTTCTCCCC
TCCAGTCCTGTATAAACCCAATCTGAAGCCAAATTCAGCTAGCATTCAGGTGATAAAGTCGAGG
TCAGCCTGATTTAGAAAGCCAAACAGAAAATAATCAACAATCACACCTCATCATCAAAATCACT
TTTAAAGAGAGTAGATATCTTTTAAACTTTATTACAAAAAAAAAATGTGCTTTTTGGTAATACT
TTTTTTTTTTTTAAATATAGGGCAGATAGCCCCAACACACCACCCTGCACACAGAAAATACTCA
TTGGTCTTCACTAGTGAAATAACCAATGGGTTGCTAAGGGCCTACTTGCCTGAACAGGCTACAC
AAGAATCTCAGAGCCCAACCCATTGTGAAGAAACATGGGCTACTTCTGAGGTTCTAGAATTCCC
AGAAGCTCTGCTTCAGCACTGGGAGCTTTTGCTTGCAGTTTGCTTCATAGCTCTGTGAAGAAGC
TGTGGCCCACACTAGGATCCTCTCTTTTCCTAAACCCAGATGAACATGTTTCTCTTCCTAATGA
GTCTTTATCTGCTTGGATCTGCCAGAGGAACATCAGGTCAGTCTGATGAGTCTTCTGGCTCCAT
AGATCATCAAACTTCAGTTCAGCAGCTTTCAGGTGAGTTCTTTCCACTTGAAAACCCTTCTGAT
GCTGAGGCTTTATATGAGACTTCTTCAGGCCTGAACACTTTAAGTGAGCATGGTTCCAGTGAGC
ATGGTTCAAGAGAGCACACTGTGGCTGAGCATACTCCTGGAGAACACGCCGAGAGCGAGCATGC
TTCGGGTGAGCCTGCTGCGACTGGACATGCAGAAGGTGAGCACACTGTAGGTGAGCAGCCTTCA
GGGGAACAGCCTTCCGGTGAACACCTCTCCGGTGAACAGCCTTTGGGTGAGCATGCATCAGGTG
AACAGCCTTCAGATGAACAGCTTTCAGGTGAACATGCCTCCGGTGAACAGCCTTCTGGTGAGCA
CGCCTTAGGTGAACAGCCTTCGGGTGAACAGCCTTCAGGTGAGCACGCTTCAGGTGAACAGTCT
TTGGGTGAGCATGCTTTGAGTGAAAAGCCTTCAGGGGAACAGCCTTCAGGTGCACCAATTTCAA
GCATATCTACAGGCACAATATTAAATTGCTACACATGTGCTTATATGAATGATCAAGGAAGATG
TCTTCGTGGAGAGGGAACCTGCATCACTCAGAATTCCCAGCAATGCATGTTAAAGAAGATCTTC
GAAGGTGGAAAACTCCAATTCATGGTTCAAGGGTGTGAGAACATGTGCCCATCTATGAACCTCT
TCTCCCATGGAACCAGGATGCAAATTATATGCTGTCGGAATCAATCTTTCTGCAATAAGATCTA
GAAGCCTGGGTCTTTTGCTTGTTTTGACTCAGGCAGTAAAAAGTCTCTATCACTCTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_008019591	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000015748.1

RefSeq Acc Id:	XP_008019591 ⟸ XM_008021400
- UniProtKB:	A0A0D9S4F9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000015748 ⟸ ENSCSAT00000000307

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000002289	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000000307.1	UniProtKB/TrEMBL
InterPro	LY6_UPA_recep-like	UniProtKB/TrEMBL
NCBI Gene	ACRV1	ENTREZGENE
PANTHER	ACROSOMAL PROTEIN SP-10	UniProtKB/TrEMBL
	URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10	UniProtKB/TrEMBL
UniProt	A0A0D9S4F9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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