P2RY6 (pyrimidinergic receptor P2Y6) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: P2RY6 (pyrimidinergic receptor P2Y6) Chlorocebus sabaeus
Analyze
Symbol: P2RY6
Name: pyrimidinergic receptor P2Y6
RGD ID: 18504812
Description: ENCODES a protein that exhibits G protein-coupled ADP receptor activity (ortholog); G protein-coupled UDP receptor activity (ortholog); G protein-coupled UTP receptor activity (ortholog); INVOLVED IN cellular response to organic cyclic compound (ortholog); cellular response to prostaglandin E stimulus (ortholog); cellular response to purine-containing compound (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: P2Y purinoceptor 6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl164,541,221 - 64,542,207 (+)Ensembl
ChlSab1.1164,508,959 - 64,543,302 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
P2RY6
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl164,541,221 - 64,542,207 (+)Ensembl
ChlSab1.1164,508,959 - 64,543,302 (+)NCBI
P2RY6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1173,264,505 - 73,298,625 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1173,264,505 - 73,298,617 (+)EnsemblGRCh38hg38GRCh38
GRCh381173,264,503 - 73,298,625 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371172,975,550 - 73,009,670 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361172,653,218 - 72,687,312 (+)NCBINCBI36hg18NCBI36
Build 341172,658,586 - 72,686,497NCBI
Celera1170,280,653 - 70,314,752 (+)NCBI
Cytogenetic Map11q13.4NCBI
HuRef1169,270,867 - 69,304,972 (+)NCBIHuRef
CHM1_11172,859,110 - 72,893,227 (+)NCBICHM1_1
P2ry6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397100,586,837 - 100,628,528 (-)NCBIGRCm39mm39
GRCm387100,937,630 - 100,975,498 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7100,937,630 - 100,974,649 (-)EnsemblGRCm38mm10GRCm38
MGSCv377108,086,148 - 108,112,880 (-)NCBIGRCm37mm9NCBIm37
MGSCv367100,811,721 - 100,838,449 (-)NCBImm8
Celera7101,288,708 - 101,316,203 (-)NCBICelera
Cytogenetic Map7E2NCBI
P2ry6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01165,972,439 - 166,008,348 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1165,972,440 - 165,997,751 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01172,169,438 - 172,204,831 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41158,381,127 - 158,406,783 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11158,460,144 - 158,485,800 (-)NCBI
Celera1153,376,657 - 153,401,528 (-)NCBICelera
Cytogenetic Map1q32NCBI
P2ry6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541418,177,406 - 18,215,428 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541418,177,406 - 18,215,428 (-)NCBIChiLan1.0ChiLan1.0
P2RY6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11171,562,990 - 71,595,540 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1171,594,250 - 71,595,236 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01168,341,722 - 68,375,923 (+)NCBIMhudiblu_PPA_v0panPan3
P2RY6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2124,929,771 - 24,930,757 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12124,929,502 - 24,966,857 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
P2ry6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364982,468,020 - 2,501,344 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
P2RY6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl97,726,631 - 7,759,721 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.197,708,452 - 7,759,721 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.298,538,019 - 8,554,097 (+)NCBISscrofa10.2Sscrofa10.2susScr3
P2ry6
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248173,648,829 - 3,672,051 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium
Low 36 14 60
Below cutoff 6

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000017911   ⟹   ENSCSAP00000017382
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl164,541,221 - 64,542,207 (+)Ensembl
RefSeq Acc Id: XM_008020078   ⟹   XP_008018269
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,532,163 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020079   ⟹   XP_008018270
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,532,163 - 64,542,502 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020080   ⟹   XP_008018271
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,532,163 - 64,542,502 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020081   ⟹   XP_008018272
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,532,163 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020082   ⟹   XP_008018273
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,515,845 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020083   ⟹   XP_008018274
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,532,163 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020084   ⟹   XP_008018275
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,532,163 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020085   ⟹   XP_008018276
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,515,845 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020086   ⟹   XP_008018277
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,515,845 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020088   ⟹   XP_008018279
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,532,163 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020089   ⟹   XP_008018280
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,515,845 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020090   ⟹   XP_008018281
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,508,959 - 64,542,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020091   ⟹   XP_008018282
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,515,845 - 64,542,502 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008020092   ⟹   XP_008018283
RefSeq Status:
Type: CODING
Position:
Vervet AssemblyChrPosition (strand)Source
ChlSab1.1164,515,845 - 64,543,302 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_008018281   ⟸   XM_008020090
RefSeq Acc Id: XP_008018283   ⟸   XM_008020092
- UniProtKB: A0A0D9S943 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008018282   ⟸   XM_008020091
RefSeq Acc Id: XP_008018276   ⟸   XM_008020085
RefSeq Acc Id: XP_008018280   ⟸   XM_008020089
RefSeq Acc Id: XP_008018277   ⟸   XM_008020086
RefSeq Acc Id: XP_008018273   ⟸   XM_008020082
- UniProtKB: A0A0D9S943 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008018271   ⟸   XM_008020080
RefSeq Acc Id: XP_008018270   ⟸   XM_008020079
- UniProtKB: A0A0D9S943 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008018272   ⟸   XM_008020081
RefSeq Acc Id: XP_008018269   ⟸   XM_008020078
RefSeq Acc Id: XP_008018274   ⟸   XM_008020083
- UniProtKB: A0A0D9S943 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008018275   ⟸   XM_008020084
RefSeq Acc Id: XP_008018279   ⟸   XM_008020088
RefSeq Acc Id: ENSCSAP00000017382   ⟸   ENSCSAT00000017911


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000000624 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCSAP00000017382 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000017911 UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  P2Y6_rcpt UniProtKB/TrEMBL
KEGG Report csab:103248012 UniProtKB/TrEMBL
NCBI Gene P2RY6 ENTREZGENE
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  P2Y6PRNOCPTR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
UniProt A0A0D9S943 ENTREZGENE, UniProtKB/TrEMBL