NAPB (NSF attachment protein beta) - Rat Genome Database

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Gene: NAPB (NSF attachment protein beta) Chlorocebus sabaeus
Analyze
Symbol: NAPB
Name: NSF attachment protein beta
RGD ID: 18504601
Description: ENCODES a protein that exhibits SNARE binding (ortholog); syntaxin binding (ortholog); INVOLVED IN protein-containing complex disassembly (ortholog); regulation of receptor internalization (ortholog); regulation of synaptic vesicle priming (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 107 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: beta-soluble NSF attachment protein; beta-soluble NSF attachment protein-like; LOC103247042; LOC103247832; uncharacterized LOC103247042
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1252,379,633 - 52,395,274 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660787,195,587 - 7,248,043 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NAPB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1252,379,633 - 52,395,274 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660787,195,587 - 7,248,043 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
NAPB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382023,374,522 - 23,421,488 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2023,374,519 - 23,421,519 (-)EnsemblGRCh38hg38GRCh38
GRCh372023,355,159 - 23,402,125 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362023,303,165 - 23,350,081 (-)NCBINCBI36Build 36hg18NCBI36
Build 342023,303,165 - 23,350,081NCBI
Celera2023,428,529 - 23,475,530 (-)NCBICelera
Cytogenetic Map20p11.21NCBI
HuRef2023,316,796 - 23,363,800 (-)NCBIHuRef
CHM1_12023,355,618 - 23,402,617 (-)NCBICHM1_1
T2T-CHM13v2.02023,434,062 - 23,481,033 (-)NCBIT2T-CHM13v2.0
Napb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392148,535,905 - 148,574,396 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2148,535,905 - 148,574,387 (-)EnsemblGRCm39 Ensembl
GRCm382148,693,985 - 148,732,425 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2148,693,985 - 148,732,467 (-)EnsemblGRCm38mm10GRCm38
MGSCv372148,520,393 - 148,558,156 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362148,386,098 - 148,423,861 (-)NCBIMGSCv36mm8
Celera2149,962,927 - 150,000,652 (-)NCBICelera
Cytogenetic Map2G3NCBI
cM Map273.53NCBI
Napb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83156,585,394 - 156,632,418 (-)NCBIGRCr8
mRatBN7.23136,132,248 - 136,179,280 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3136,133,428 - 136,179,345 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3140,088,084 - 140,131,334 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03148,672,232 - 148,715,485 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03146,361,580 - 146,404,830 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03143,017,571 - 143,063,904 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3143,020,454 - 143,063,983 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03149,431,212 - 149,473,190 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43137,447,072 - 137,490,500 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3134,978,251 - 135,020,908 (-)NCBICelera
Cytogenetic Map3q41NCBI
Napb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541530,392,165 - 30,427,773 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541530,392,692 - 30,427,773 (-)NCBIChiLan1.0ChiLan1.0
NAPB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22124,247,686 - 24,294,702 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12024,244,519 - 24,291,535 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02023,316,153 - 23,363,142 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12023,667,464 - 23,713,935 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2023,667,469 - 23,713,935 (-)Ensemblpanpan1.1panPan2
NAPB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.124217,287 - 258,278 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl24217,381 - 255,752 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha24239,058 - 280,048 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.024609,668 - 650,674 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl24609,687 - 650,669 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.124211,965 - 252,952 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.024311,328 - 352,320 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.024595,207 - 636,199 (+)NCBIUU_Cfam_GSD_1.0
Napb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640148,737,781 - 148,785,166 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366202,157,528 - 2,205,586 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366202,158,246 - 2,205,624 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAPB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1730,359,420 - 30,396,083 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11730,361,439 - 30,396,105 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21734,450,374 - 34,485,114 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Napb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474123,046,779 - 23,085,229 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474123,046,856 - 23,085,234 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_037993958   ⟹   XP_037849886
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660787,195,587 - 7,248,027 (-)NCBI
RefSeq Acc Id: XM_037993959   ⟹   XP_037849887
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660787,195,587 - 7,248,043 (-)NCBI
RefSeq Acc Id: XM_037993960   ⟹   XP_037849888
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660787,195,587 - 7,242,779 (-)NCBI
RefSeq Acc Id: XM_037993961   ⟹   XP_037849889
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660787,195,587 - 7,242,723 (-)NCBI
RefSeq Acc Id: XM_037993962   ⟹   XP_037849890
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660787,195,587 - 7,248,033 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_037849887   ⟸   XM_037993959
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037849890   ⟸   XM_037993962
- Peptide Label: isoform X5
RefSeq Acc Id: XP_037849886   ⟸   XM_037993958
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037849888   ⟸   XM_037993960
- Peptide Label: isoform X3
RefSeq Acc Id: XP_037849889   ⟸   XM_037993961
- Peptide Label: isoform X4


Additional Information

Database Acc Id Source(s)
NCBI Gene NAPB ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-03 NAPB  NSF attachment protein beta  LOC103247832  beta-soluble NSF attachment protein-like  Data merged from RGD:18662932 737654 PROVISIONAL
2020-12-03 NAPB  NSF attachment protein beta  LOC103247042  uncharacterized LOC103247042  Data merged from RGD:18502424 737654 PROVISIONAL