STRADB (STE20 related adaptor beta)

Gene: STRADB (STE20 related adaptor beta) Chlorocebus sabaeus

Analyze

Symbol:

STRADB

Name:

STE20 related adaptor beta

RGD ID:

18499437

Description:

ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); JNK cascade (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH autoimmune lymphoproliferative syndrome type 2B (ortholog); Autoimmune Lymphoproliferative Syndrome, Type V (ortholog); common variable immunodeficiency 1 (ortholog); FOUND IN aggresome (inferred); cytoplasm (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

STE20-related kinase adapter protein beta; STE20-related kinase adaptor beta

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	87,096,768 - 87,127,131 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	87,096,838 - 87,127,209 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	112,293,201 - 112,322,783 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autoimmune lymphoproliferative syndrome type 2B (ISO)

Autoimmune Lymphoproliferative Syndrome, Type V (ISO)

common variable immunodeficiency 1 (ISO)

genetic disease (ISO)

Joubert syndrome 14 (ISO)

Neurodevelopmental Disorders (ISO)

Primary Pulmonary Hypertension, 1 (ISO)

Pulmonary Arterial Hypertension (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell morphogenesis (IEA,ISO)

JNK cascade (IEA,ISO)

negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (IEA,ISO)

protein export from nucleus (IEA)

Cellular Component

aggresome (IEA)

cytoplasm (IEA)

cytosol (IEA)

nucleus (IEA)

serine/threonine protein kinase complex (IEA)

Molecular Function

ATP binding (IEA)

protein binding (ISO)

protein kinase activity (IEA,ISO)

protein serine/threonine kinase activator activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

STRADB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	87,096,768 - 87,127,131 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	87,096,838 - 87,127,209 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	112,293,201 - 112,322,783 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

STRADB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	201,451,740 - 201,480,846 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	201,387,858 - 201,480,846 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	202,316,463 - 202,345,569 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	202,024,637 - 202,053,819 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	202,141,897 - 202,170,956	NCBI
Celera	2	196,068,337 - 196,097,512 (+)	NCBI		Celera
Cytogenetic Map	2	q33.1	NCBI
HuRef	2	194,164,497 - 194,193,482 (+)	NCBI		HuRef
CHM1_1	2	202,322,488 - 202,351,676 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	201,932,523 - 201,961,624 (+)	NCBI		T2T-CHM13v2.0

Stradb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	59,012,681 - 59,034,281 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	59,012,681 - 59,034,874 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	58,973,522 - 58,995,122 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	58,973,522 - 58,995,715 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	59,030,415 - 59,051,966 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	58,918,117 - 58,939,668 (+)	NCBI		MGSCv36	mm8
Celera	1	59,489,295 - 59,510,821 (+)	NCBI		Celera
Cytogenetic Map	1	C1.3	NCBI
cM Map	1	29.2	NCBI

Stradb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	67,908,277 - 67,927,224 (+)	NCBI		GRCr8
mRatBN7.2	9	60,414,182 - 60,433,084 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	60,414,182 - 60,433,084 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	68,909,965 - 68,928,356 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	74,025,925 - 74,044,316 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	72,344,201 - 72,362,592 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	65,763,437 - 65,782,513 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	65,763,437 - 65,782,513 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	65,570,181 - 65,589,257 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	57,540,915 - 57,559,817 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	57,853,259 - 57,871,982 (+)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

Stradb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	181,120 - 198,885 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	181,120 - 198,882 (-)	NCBI	ChiLan1.0	ChiLan1.0

STRADB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	104,075,176 - 104,104,917 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	104,090,176 - 104,119,917 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	88,705,840 - 88,735,511 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	206,861,151 - 206,890,868 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	206,864,319 - 206,890,868 (+)	Ensembl	panpan1.1		panPan2

STRADB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	10,521,643 - 10,557,611 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	10,521,574 - 10,557,231 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	11,405,300 - 11,441,314 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	10,426,375 - 10,462,454 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	10,426,315 - 10,462,454 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	10,407,001 - 10,442,996 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	10,386,018 - 10,422,012 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	10,379,447 - 10,415,449 (+)	NCBI		UU_Cfam_GSD_1.0

Stradb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	158,738,725 - 158,758,405 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936726	709,038 - 731,338 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936726	709,037 - 728,696 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STRADB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	105,055,274 - 105,126,927 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	105,055,218 - 105,083,429 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	116,465,665 - 116,493,729 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Stradb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624899	255,042 - 275,235 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624899	255,042 - 275,258 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36	20	51
Low			9
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007965851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000008828 ⟹ ENSCSAP00000006960

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	10	87,096,838 - 87,127,209 (+)	Ensembl

RefSeq Acc Id:

XM_007965851 ⟹ XP_007964042

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	87,096,768 - 87,127,131 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	112,293,201 - 112,322,783 (-)	NCBI

Sequence:

show sequence

CCTTCTCGCTGCCCAGCCCCAGGGAGGGAGGCGGGGCCGCGACCCCGGCGCGGGTGGGGCGAAT
GCGTTCCCAGCGGGTAGCCTGGGTCTGGGGCAGAGTTCCAAGCCCACGGCCCCGGTCGCGGCCT
CGCCGCCCTCCCGCGCCCCGCGCCGGGAGCGGGCCTAGAACGCTCGCCTAGCCCCTCCGCGAGC
AGGGCTCTGGCGCCCGCCCCTGTCCGCACAGCTGGCAGCCTGAAGAGAGTCGCTGGCCGTGGTC
GCCGCTAGGTAGGATATATCTGCATTTTGAAAGGAAGATAAAACAAAAGCCTTCTTTGGAATAG
ATGGATTTTTGTCACTTTCTGTATGAACTAAAGCGATTCAATGTCTCTTTTGGATTGTTTCTGC
ACTTCAAGAACACAAGTTGAATCACTCAGACCTGAAAAACAGTCTGAAACCAGTATCCATCAAT
ACTTGGTTGATGAGCCAACCCTTTCCTGGTCACCTCCATCCACTAGAGCAAGCGAAGTAGTATG
TTCCACCAACGTTTCTCACTACGAGCTCCAAGTAGAAATAGGAAGAGGATTTGACAACTTGACT
TCTGTCCATCTTGCACGGCATACTCCCACGGGAACACTGGTAACTATAAAAATTACAAATCTGG
AAAACTGCAATGAAGAACGCCTGAAAGCTTTACAGAAAGCCGTGATTCTCTCCCACTTTTTCCG
GCATCCCAATATTACAACTTATTGGACAGTTTTCACTGTTGGCAGCTGGCTTTGGGTTATTTCT
CCATTTATGGCCTATGGTTCAGCAAGTCAGCTCTTGAGGACCTATTTTCCTGAAGGAATGAGTG
AAACTTTAATAAGAAACATTCTCTTTGGAGCAGTGAGAGGGTTGAACTATCTGCACCAAAATGG
CTGTATTCACAGGAGTATTAAAGCCAGCCATATCCTCATTTCTGGTGATGGCCTAGTGACCCTC
TCTGGCCTGTCCCATCTGCATAGTTTGGTTAAGCATGGACAGAGGCACACAGCTGTGTATGATT
TCCCACAGTTCAGCACATCAGTGCAGCCGTGGCTGAGTCCAGAACTACTGAGACAGGATTTACA
TGGGTATAATGTGAAGTCAGATATTTACAGTGTTGGGATTACAGCATGTGAATTAGCCAGTGGG
CAGGTGCCTTTCCAGGACATGCATAGAACTCAGATGCTGTTACAGAAACTGAAAGGTCCTCCTT
ACAGCCCATTGGATATCAGTATTTTCCCTCAATCAGAATCCAGAATGAAAAACTCCCGGTCAGG
TGTAGACTCTGGGATTGGAGAAAGCGTGCTTGTCTCCAGTGGAACTCACACAGTAAATAGTGAC
CGATTACACACACCATCCTCAAAAACCTTCTCTCCTGCCTTCTTTAGCTTGGTACAGCTCTGTT
TGCAACAAGATCCTGAGAAAAGGCCATCAGCAAGCAGTTTATTGTCCCATGTTTTCTTCAAACA
GATGAAAGAAGAAAGCCATGATTCAATACTTTCACTGTTGCCTCCTGCTTATAACAAGCCATCA
ATATCATTGCCTCCAGTGTTACCTTGGACTGAGCCAGAATGTGATTTTCCTGATGAAAAAGACT
CATACTGGGAATTCTAGGGCTGCCAAATCATTTTATGTCCTATATACTTGACACTTTCTCCTTG
CTGCTTTTTCTTCTGTATTGCTAGGTACAAATACCAGAATTATACTTGAAAATACAGTTGGTGC
ACTGGAGAATCTATTATTTAAAACCACTCTGTTCAAAGGGGCATCAGTTTGTAGTCCCTCTGGT
TCCCACAGAGTACTATGACAACTCCAAGGAAACATCAGAATTACTAATCTAGCGAGTGTCATTT
ATTCTGGAATTTTTTTCTAAGCTGTGACTAACTCTTTTTCTCTCTCAATATAATTTTTGAGCCA
GTTAATTTTTTTCAGTATTTTGCTGTCCCTTGGGAATGGGCCCTCAGAGGACAGTGCTTCCAAG
TACATCTTCTTCTCCCAGATTCTCTGGCCTTTTTAATGAGCTATTGTTAAACCAATGGGCTGGT
TTATCTTACATCAGACCCTTTTCTGGTAGAGGGAAAATGTTTGTACTTTCCCTTTTTCTTCTGT
TAATACTTATGGTAACATCTAACTGAACCTCACTGACATTAAATGATTCACTTGAAATATATAC
AGAAATTGTAATTTGCTTTTTTTTTTAAAAAAAGGGGGCTAAAGTAACACTTTCCTACTTATGT
AAATTATAGATCCTAAATTCATGCACCCCGTGGGAGCTCAATAAAGATTTACTGAATTGA

hide sequence

RefSeq Acc Id:

XM_007965852 ⟹ XP_007964043

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	87,096,811 - 87,127,131 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	112,293,201 - 112,322,736 (-)	NCBI

Sequence:

show sequence

CCCGGCGCGGGTGGGGCGAATGCGTTCCCAGCGGGTAGCCTGGGTCTGGGGCAGAGTTCCAAGC
CCACGGCCCCGGTCGCGGCCTCGCCGCCCTCCCGCGCCCCGCGCCGGGAGCGGGCCTAGAACGC
TCGCCTAGCCCCTCCGCGAGCAGGGCTCTGGCGCCCGCCCCTGTCCGCACAGCTGGCAGCCTGA
AGAGAGTCGCTGGCCGTGGTCGCCGCTAGGGATATATCTGCATTTTGAAAGGAAGATAAAACAA
AAGCCTTCTTTGGAATAGATGGATTTTTGTCACTTTCTGTATGAACTAAAGCGATTCAATGTCT
CTTTTGGATTGTTTCTGCACTTCAAGAACACAAGTTGAATCACTCAGACCTGAAAAACAGTCTG
AAACCAGTATCCATCAATACTTGGTTGATGAGCCAACCCTTTCCTGGTCACCTCCATCCACTAG
AGCAAGCGAAGTAGTATGTTCCACCAACGTTTCTCACTACGAGCTCCAAGTAGAAATAGGAAGA
GGATTTGACAACTTGACTTCTGTCCATCTTGCACGGCATACTCCCACGGGAACACTGGTAACTA
TAAAAATTACAAATCTGGAAAACTGCAATGAAGAACGCCTGAAAGCTTTACAGAAAGCCGTGAT
TCTCTCCCACTTTTTCCGGCATCCCAATATTACAACTTATTGGACAGTTTTCACTGTTGGCAGC
TGGCTTTGGGTTATTTCTCCATTTATGGCCTATGGTTCAGCAAGTCAGCTCTTGAGGACCTATT
TTCCTGAAGGAATGAGTGAAACTTTAATAAGAAACATTCTCTTTGGAGCAGTGAGAGGGTTGAA
CTATCTGCACCAAAATGGCTGTATTCACAGGAGTATTAAAGCCAGCCATATCCTCATTTCTGGT
GATGGCCTAGTGACCCTCTCTGGCCTGTCCCATCTGCATAGTTTGGTTAAGCATGGACAGAGGC
ACACAGCTGTGTATGATTTCCCACAGTTCAGCACATCAGTGCAGCCGTGGCTGAGTCCAGAACT
ACTGAGACAGGATTTACATGGGTATAATGTGAAGTCAGATATTTACAGTGTTGGGATTACAGCA
TGTGAATTAGCCAGTGGGCAGGTGCCTTTCCAGGACATGCATAGAACTCAGATGCTGTTACAGA
AACTGAAAGGTCCTCCTTACAGCCCATTGGATATCAGTATTTTCCCTCAATCAGAATCCAGAAT
GAAAAACTCCCGGTCAGGTGTAGACTCTGGGATTGGAGAAAGCGTGCTTGTCTCCAGTGGAACT
CACACAGTAAATAGTGACCGATTACACACACCATCCTCAAAAACCTTCTCTCCTGCCTTCTTTA
GCTTGGTACAGCTCTGTTTGCAACAAGATCCTGAGAAAAGGCCATCAGCAAGCAGTTTATTGTC
CCATGTTTTCTTCAAACAGATGAAAGAAGAAAGCCATGATTCAATACTTTCACTGTTGCCTCCT
GCTTATAACAAGCCATCAATATCATTGCCTCCAGTGTTACCTTGGACTGAGCCAGAATGTGATT
TTCCTGATGAAAAAGACTCATACTGGGAATTCTAGGGCTGCCAAATCATTTTATGTCCTATATA
CTTGACACTTTCTCCTTGCTGCTTTTTCTTCTGTATTGCTAGGTACAAATACCAGAATTATACT
TGAAAATACAGTTGGTGCACTGGAGAATCTATTATTTAAAACCACTCTGTTCAAAGGGGCATCA
GTTTGTAGTCCCTCTGGTTCCCACAGAGTACTATGACAACTCCAAGGAAACATCAGAATTACTA
ATCTAGCGAGTGTCATTTATTCTGGAATTTTTTTCTAAGCTGTGACTAACTCTTTTTCTCTCTC
AATATAATTTTTGAGCCAGTTAATTTTTTTCAGTATTTTGCTGTCCCTTGGGAATGGGCCCTCA
GAGGACAGTGCTTCCAAGTACATCTTCTTCTCCCAGATTCTCTGGCCTTTTTAATGAGCTATTG
TTAAACCAATGGGCTGGTTTATCTTACATCAGACCCTTTTCTGGTAGAGGGAAAATGTTTGTAC
TTTCCCTTTTTCTTCTGTTAATACTTATGGTAACATCTAACTGAACCTCACTGACATTAAATGA
TTCACTTGAAATATATACAGAAATTGTAATTTGCTTTTTTTTTTAAAAAAAGGGGGCTAAAGTA
ACACTTTCCTACTTATGTAAATTATAGATCCTAAATTCATGCACCCCGTGGGAGCTCAATAAAG
ATTTACTGAATTGA

hide sequence

RefSeq Acc Id:

XM_007965853 ⟹ XP_007964044

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	87,096,810 - 87,127,131 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	112,293,201 - 112,322,737 (-)	NCBI

Sequence:

show sequence

CCCCGGCGCGGGTGGGGCGAATGCGTTCCCAGCGGGTAGCCTGGGTCTGGGGCAGAGTTCCAAG
CCCACGGCCCCGGTCGCGGCCTCGCCGCCCTCCCGCGCCCCGCGCCGGGAGCGGGCCTAGAACG
CTCGCCTAGCCCCTCCGCGAGCAGGGCTCTGGCGCCCGCCCCTGTCCGCACAGCTGGCAGCCTG
AAGAGAGTCGCTGGCCGTGGTCGCCGCTAGGTAGGATATATCTGCATTTTGAAAGGAAGATAAA
ACAAAAGCCTTCTTTGGAATAGATGGATTTTTGTCACTTTCTGTATGAACTAAAGCGATTCAAT
GTCTCTTTTGGAAGCCATTAGAAACTCTGCAGAGGAATCAGTTGTACAGCTATCTTGACATTGT
TAGCATCTATTCTTCAGGGATTGTTTCTGCACTTCAAGAACACAAGTTGAATCACTCAGACCTG
AAAAACAGTCTGAAACCAGTATCCATCAATACTTGTTCTTGTACCTCCGTGTAGCTCAACTACT
GTCAATGGTGGTCGTCCAACCTCCAAATATATCAGTGGAGAGAGGATAATGGAAAGACGCAGCT
TGATGCCTGAACTACACTTGGATGGCACCGGTTGATGAGCCAACCCTTTCCTGGTCACCTCCAT
CCACTAGAGCAAGCGAAGTAGTATGTTCCACCAACGTTTCTCACTACGAGCTCCAAGTAGAAAT
AGGAAGAGGATTTGACAACTTGACTTCTGTCCATCTTGCACGGCATACTCCCACGGGAACACTG
GTAACTATAAAAATTACAAATCTGGAAAACTGCAATGAAGAACGCCTGAAAGCTTTACAGAAAG
CCGTGATTCTCTCCCACTTTTTCCGGCATCCCAATATTACAACTTATTGGACAGTTTTCACTGT
TGGCAGCTGGCTTTGGGTTATTTCTCCATTTATGGCCTATGGTTCAGCAAGTCAGCTCTTGAGG
ACCTATTTTCCTGAAGGAATGAGTGAAACTTTAATAAGAAACATTCTCTTTGGAGCAGTGAGAG
GGTTGAACTATCTGCACCAAAATGGCTGTATTCACAGGAGTATTAAAGCCAGCCATATCCTCAT
TTCTGGTGATGGCCTAGTGACCCTCTCTGGCCTGTCCCATCTGCATAGTTTGGTTAAGCATGGA
CAGAGGCACACAGCTGTGTATGATTTCCCACAGTTCAGCACATCAGTGCAGCCGTGGCTGAGTC
CAGAACTACTGAGACAGGATTTACATGGGTATAATGTGAAGTCAGATATTTACAGTGTTGGGAT
TACAGCATGTGAATTAGCCAGTGGGCAGGTGCCTTTCCAGGACATGCATAGAACTCAGATGCTG
TTACAGAAACTGAAAGGTCCTCCTTACAGCCCATTGGATATCAGTATTTTCCCTCAATCAGAAT
CCAGAATGAAAAACTCCCGGTCAGGTGTAGACTCTGGGATTGGAGAAAGCGTGCTTGTCTCCAG
TGGAACTCACACAGTAAATAGTGACCGATTACACACACCATCCTCAAAAACCTTCTCTCCTGCC
TTCTTTAGCTTGGTACAGCTCTGTTTGCAACAAGATCCTGAGAAAAGGCCATCAGCAAGCAGTT
TATTGTCCCATGTTTTCTTCAAACAGATGAAAGAAGAAAGCCATGATTCAATACTTTCACTGTT
GCCTCCTGCTTATAACAAGCCATCAATATCATTGCCTCCAGTGTTACCTTGGACTGAGCCAGAA
TGTGATTTTCCTGATGAAAAAGACTCATACTGGGAATTCTAGGGCTGCCAAATCATTTTATGTC
CTATATACTTGACACTTTCTCCTTGCTGCTTTTTCTTCTGTATTGCTAGGTACAAATACCAGAA
TTATACTTGAAAATACAGTTGGTGCACTGGAGAATCTATTATTTAAAACCACTCTGTTCAAAGG
GGCATCAGTTTGTAGTCCCTCTGGTTCCCACAGAGTACTATGACAACTCCAAGGAAACATCAGA
ATTACTAATCTAGCGAGTGTCATTTATTCTGGAATTTTTTTCTAAGCTGTGACTAACTCTTTTT
CTCTCTCAATATAATTTTTGAGCCAGTTAATTTTTTTCAGTATTTTGCTGTCCCTTGGGAATGG
GCCCTCAGAGGACAGTGCTTCCAAGTACATCTTCTTCTCCCAGATTCTCTGGCCTTTTTAATGA
GCTATTGTTAAACCAATGGGCTGGTTTATCTTACATCAGACCCTTTTCTGGTAGAGGGAAAATG
TTTGTACTTTCCCTTTTTCTTCTGTTAATACTTATGGTAACATCTAACTGAACCTCACTGACAT
TAAATGATTCACTTGAAATATATACAGAAATTGTAATTTGCTTTTTTTTTTAAAAAAAGGGGGC
TAAAGTAACACTTTCCTACTTATGTAAATTATAGATCCTAAATTCATGCACCCCGTGGGAGCTC
AATAAAGATTTACTGAATTGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007964042	(Get FASTA)	NCBI Sequence Viewer
	XP_007964043	(Get FASTA)	NCBI Sequence Viewer
	XP_007964044	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000006960
	ENSCSAP00000006960.1

RefSeq Acc Id:	XP_007964042 ⟸ XM_007965851
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9REC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007964044 ⟸ XM_007965853
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007964043 ⟸ XM_007965852
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9REC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000006960 ⟸ ENSCSAT00000008828

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000010744	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000008828.1	UniProtKB/TrEMBL
Gene3D-CATH	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	Kinase-like_dom_sf	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	STRAD_A/B-like	UniProtKB/TrEMBL
KEGG Report	csab:103217644	UniProtKB/TrEMBL
NCBI Gene	STRADB	ENTREZGENE
PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	UniProtKB/TrEMBL
	STE20-RELATED KINASE ADAPTER PROTEIN BETA	UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/TrEMBL
PROSITE	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/TrEMBL
UniProt	A0A0D9REC1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar