LOX (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 23 | 25,158,458 - 25,172,763 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 25,157,269 - 25,172,757 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666034 | 53,042,867 - 53,057,523 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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LOX (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 122,063,195 - 122,078,259 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 122,063,195 - 122,078,413 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 121,398,890 - 121,413,954 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 121,429,918 - 121,441,853 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 121,429,917 - 121,441,853 | NCBI | | | | | Celera | 5 | 117,353,346 - 117,368,512 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q23.1 | NCBI | | | | | HuRef | 5 | 116,590,466 - 116,605,632 (-) | NCBI | | HuRef | | | CHM1_1 | 5 | 120,831,494 - 120,846,659 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 122,579,951 - 122,595,014 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Lox (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 18 | 52,649,132 - 52,662,939 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 18 | 52,649,139 - 52,662,939 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 18 | 52,516,060 - 52,529,867 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 18 | 52,516,067 - 52,529,867 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 18 | 52,676,892 - 52,689,362 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 18 | 52,641,436 - 52,655,072 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 18 | 53,829,941 - 53,842,352 (-) | NCBI | | Celera | | | Cytogenetic Map | 18 | D1 | NCBI | | | | | cM Map | 18 | 28.22 | NCBI | | | | |
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Lox (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 18 | 48,162,889 - 48,175,640 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 18 | 45,964,544 - 45,977,431 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 18 | 45,967,343 - 46,041,477 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 18 | 48,017,910 - 48,092,296 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 18 | 48,730,134 - 48,804,144 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 18 | 46,523,816 - 46,598,201 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 18 | 47,500,320 - 47,577,819 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 18 | 47,500,330 - 47,577,819 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 18 | 46,713,533 - 46,791,367 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 18 | 47,896,674 - 47,970,829 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 18 | 47,931,499 - 47,944,296 (-) | NCBI | | | | | Celera | 18 | 44,155,712 - 44,229,997 (-) | NCBI | | Celera | | | Cytogenetic Map | 18 | q11 | NCBI | | | | |
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Lox (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955521 | 185,792 - 193,926 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955521 | 178,290 - 193,926 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOX (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 117,339,359 - 117,353,228 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 115,491,718 - 115,506,516 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 117,450,833 - 117,464,957 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 123,233,359 - 123,248,658 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 123,234,662 - 123,248,717 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LOX (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 11 | 12,023,645 - 12,040,015 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 11 | 12,027,250 - 12,039,819 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 11 | 10,807,698 - 10,821,728 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 11 | 12,730,282 - 12,744,862 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 11 | 12,732,124 - 12,744,691 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 11 | 11,471,714 - 11,486,299 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 11 | 11,289,217 - 11,303,248 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 11 | 11,920,314 - 11,934,905 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Lox (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 134,444,800 - 134,452,726 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936575 | 2,524,342 - 2,533,559 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936575 | 2,526,067 - 2,533,996 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LOX (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 125,591,789 - 125,607,594 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 125,595,115 - 125,607,026 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 130,888,135 - 130,900,048 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Lox (Heterocephalus glaber - naked mole-rat) |
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