RIMS1 (regulating synaptic membrane exocytosis 1) - Rat Genome Database

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Gene: RIMS1 (regulating synaptic membrane exocytosis 1) Chlorocebus sabaeus
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Symbol: RIMS1
Name: regulating synaptic membrane exocytosis 1
RGD ID: 18492204
Description: ENCODES a protein that exhibits protein kinase binding (ortholog); SH3 domain binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN calcium ion-regulated exocytosis of neurotransmitter (ortholog); long-term synaptic potentiation (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN extrinsic component of presynaptic active zone membrane (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: regulating synaptic membrane exocytosis protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1172,690,430 - 3,176,794 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl172,690,418 - 3,176,738 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660588,621,932 - 9,124,698 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RIMS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1172,690,430 - 3,176,794 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl172,690,418 - 3,176,738 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660588,621,932 - 9,124,698 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
RIMS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38671,886,550 - 72,403,145 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl671,886,550 - 72,403,150 (+)EnsemblGRCh38hg38GRCh38
GRCh37672,596,253 - 73,112,847 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36672,653,371 - 73,169,229 (+)NCBINCBI36Build 36hg18NCBI36
Build 34672,653,447 - 73,167,137NCBI
Celera672,990,111 - 73,506,277 (+)NCBICelera
Cytogenetic Map6q13NCBI
HuRef669,794,715 - 70,311,090 (+)NCBIHuRef
CHM1_1672,762,989 - 73,279,548 (+)NCBICHM1_1
T2T-CHM13v2.0673,067,717 - 73,580,721 (+)NCBIT2T-CHM13v2.0
Rims1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39122,356,196 - 22,845,239 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl122,356,475 - 22,845,203 (-)EnsemblGRCm39 Ensembl
GRCm38122,285,972 - 22,806,158 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl122,286,251 - 22,805,994 (-)EnsemblGRCm38mm10GRCm38
MGSCv37122,278,503 - 22,422,924 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv37122,475,024 - 22,812,563 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36122,271,058 - 22,414,692 (-)NCBIMGSCv36mm8
Celera122,160,697 - 22,651,999 (-)NCBICelera
Cytogenetic Map1A5NCBI
cM Map18.54NCBI
Rims1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8932,193,352 - 32,692,998 (-)NCBIGRCr8
mRatBN7.2924,696,959 - 25,196,404 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl924,698,854 - 25,196,631 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx933,205,759 - 33,705,668 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0938,311,750 - 38,811,445 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0936,628,202 - 37,133,961 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0928,440,408 - 28,973,246 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl928,442,229 - 28,973,246 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0927,284,845 - 27,813,498 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4921,089,088 - 21,594,679 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1921,090,501 - 21,596,093 (-)NCBI
Celera922,268,968 - 22,762,652 (-)NCBICelera
Cytogenetic Map9q13NCBI
Rims1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554886,936,952 - 7,197,022 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554886,999,128 - 7,196,583 (+)NCBIChiLan1.0ChiLan1.0
RIMS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2591,867,737 - 92,384,257 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1689,793,234 - 90,309,366 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0669,714,807 - 70,231,260 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1673,304,152 - 73,523,422 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl673,008,176 - 73,523,422 (+)Ensemblpanpan1.1panPan2
RIMS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11234,473,974 - 34,661,893 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1234,474,033 - 34,659,410 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1234,042,997 - 34,520,866 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01234,724,669 - 35,202,130 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1234,724,007 - 35,202,201 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11234,260,108 - 34,737,956 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01234,298,396 - 34,775,746 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01234,408,939 - 34,886,369 (+)NCBIUU_Cfam_GSD_1.0
Rims1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494669,448,844 - 69,892,776 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366183,606,524 - 4,047,711 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366183,678,400 - 4,047,994 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RIMS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl151,785,495 - 52,244,934 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1151,785,140 - 52,246,456 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2158,399,458 - 58,584,713 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
75 35 18 33 33 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008013509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008013562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037987122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_501240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000011983   ⟹   ENSCSAP00000010038
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl172,690,418 - 3,176,738 (-)Ensembl
RefSeq Acc Id: XM_008013509   ⟹   XP_008011700
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013510   ⟹   XP_008011701
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013512   ⟹   XP_008011703
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013518   ⟹   XP_008011709
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013520   ⟹   XP_008011711
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013521   ⟹   XP_008011712
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013525   ⟹   XP_008011716
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013526   ⟹   XP_008011717
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013527   ⟹   XP_008011718
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013528   ⟹   XP_008011719
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013529   ⟹   XP_008011720
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013530   ⟹   XP_008011721
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013531   ⟹   XP_008011722
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,794 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013532   ⟹   XP_008011723
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013533   ⟹   XP_008011724
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013534   ⟹   XP_008011725
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013539   ⟹   XP_008011730
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013542   ⟹   XP_008011733
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013543   ⟹   XP_008011734
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013544   ⟹   XP_008011735
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013545   ⟹   XP_008011736
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 3,176,705 (-)NCBI
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013552   ⟹   XP_008011743
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 2,799,714 (-)NCBI
Vero_WHO_p1.0NW_0236660588,621,932 - 8,739,272 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013553   ⟹   XP_008011744
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 2,799,714 (-)NCBI
Vero_WHO_p1.0NW_0236660588,621,932 - 8,739,271 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013554   ⟹   XP_008011745
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 2,799,685 (-)NCBI
Vero_WHO_p1.0NW_0236660588,621,932 - 8,742,417 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013555   ⟹   XP_008011746
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 2,785,761 (-)NCBI
Vero_WHO_p1.0NW_0236660588,621,932 - 8,778,526 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013556   ⟹   XP_008011747
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1172,690,430 - 2,763,365 (-)NCBI
Vero_WHO_p1.0NW_0236660588,621,932 - 8,694,638 (-)NCBI
Sequence:
RefSeq Acc Id: XM_037987097   ⟹   XP_037843025
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987098   ⟹   XP_037843026
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987099   ⟹   XP_037843027
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987101   ⟹   XP_037843029
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987102   ⟹   XP_037843030
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987103   ⟹   XP_037843031
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987104   ⟹   XP_037843032
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987105   ⟹   XP_037843033
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987106   ⟹   XP_037843034
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987107   ⟹   XP_037843035
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987108   ⟹   XP_037843036
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987109   ⟹   XP_037843037
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987110   ⟹   XP_037843038
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987112   ⟹   XP_037843040
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987113   ⟹   XP_037843041
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987114   ⟹   XP_037843042
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987115   ⟹   XP_037843043
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987116   ⟹   XP_037843044
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987117   ⟹   XP_037843045
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987118   ⟹   XP_037843046
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987119   ⟹   XP_037843047
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987120   ⟹   XP_037843048
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,622,282 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987121   ⟹   XP_037843049
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,728,357 - 9,124,698 (-)NCBI
RefSeq Acc Id: XM_037987122   ⟹   XP_037843050
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660588,621,932 - 8,776,831 (-)NCBI
Protein Sequences
Protein RefSeqs XP_008011700 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011701 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011703 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011709 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011711 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011712 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011716 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011717 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011718 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011719 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011720 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011721 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011722 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011723 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011724 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011725 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011730 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011733 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011734 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011735 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011736 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011743 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011744 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011745 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011746 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011747 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843025 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843026 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843027 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843029 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843030 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843031 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843032 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843033 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843034 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843035 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843036 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843037 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843038 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843040 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843041 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843042 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843043 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843044 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843045 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843046 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843047 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843048 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843049 (Get FASTA)   NCBI Sequence Viewer  
  XP_037843050 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000010038.1
RefSeq Acc Id: XP_008011722   ⟸   XM_008013531
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011701   ⟸   XM_008013510
- Peptide Label: isoform X3
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011736   ⟸   XM_008013545
- Peptide Label: isoform X43
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011725   ⟸   XM_008013534
- Peptide Label: isoform X30
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011734   ⟸   XM_008013543
- Peptide Label: isoform X37
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011700   ⟸   XM_008013509
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011724   ⟸   XM_008013533
- Peptide Label: isoform X29
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011723   ⟸   XM_008013532
- Peptide Label: isoform X28
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011721   ⟸   XM_008013530
- Peptide Label: isoform X25
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011735   ⟸   XM_008013544
- Peptide Label: isoform X38
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011719   ⟸   XM_008013528
- Peptide Label: isoform X18
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011712   ⟸   XM_008013521
- Peptide Label: isoform X8
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011733   ⟸   XM_008013542
- Peptide Label: isoform X36
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011720   ⟸   XM_008013529
- Peptide Label: isoform X20
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011718   ⟸   XM_008013527
- Peptide Label: isoform X16
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011730   ⟸   XM_008013539
- Peptide Label: isoform X34
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011717   ⟸   XM_008013526
- Peptide Label: isoform X13
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011716   ⟸   XM_008013525
- Peptide Label: isoform X11
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011711   ⟸   XM_008013520
- Peptide Label: isoform X6
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011709   ⟸   XM_008013518
- Peptide Label: isoform X5
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011703   ⟸   XM_008013512
- Peptide Label: isoform X4
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008011743   ⟸   XM_008013552
- Peptide Label: isoform X45
RefSeq Acc Id: XP_008011744   ⟸   XM_008013553
- Peptide Label: isoform X45
RefSeq Acc Id: XP_008011745   ⟸   XM_008013554
- Peptide Label: isoform X45
RefSeq Acc Id: XP_008011746   ⟸   XM_008013555
- Peptide Label: isoform X46
RefSeq Acc Id: XP_008011747   ⟸   XM_008013556
- Peptide Label: isoform X47
Ensembl Acc Id: ENSCSAP00000010038   ⟸   ENSCSAT00000011983
RefSeq Acc Id: XP_037843050   ⟸   XM_037987122
- Peptide Label: isoform X46
RefSeq Acc Id: XP_037843041   ⟸   XM_037987113
- Peptide Label: isoform X31
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843047   ⟸   XM_037987119
- Peptide Label: isoform X41
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843040   ⟸   XM_037987112
- Peptide Label: isoform X27
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843045   ⟸   XM_037987117
- Peptide Label: isoform X39
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843035   ⟸   XM_037987107
- Peptide Label: isoform X22
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843037   ⟸   XM_037987109
- Peptide Label: isoform X24
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843034   ⟸   XM_037987106
- Peptide Label: isoform X21
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843032   ⟸   XM_037987104
- Peptide Label: isoform X17
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843044   ⟸   XM_037987116
- Peptide Label: isoform X35
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843031   ⟸   XM_037987103
- Peptide Label: isoform X15
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843030   ⟸   XM_037987102
- Peptide Label: isoform X14
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843043   ⟸   XM_037987115
- Peptide Label: isoform X33
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843025   ⟸   XM_037987097
- Peptide Label: isoform X7
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843048   ⟸   XM_037987120
- Peptide Label: isoform X42
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843046   ⟸   XM_037987118
- Peptide Label: isoform X40
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843038   ⟸   XM_037987110
- Peptide Label: isoform X26
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843027   ⟸   XM_037987099
- Peptide Label: isoform X10
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843026   ⟸   XM_037987098
- Peptide Label: isoform X9
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843036   ⟸   XM_037987108
- Peptide Label: isoform X23
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843033   ⟸   XM_037987105
- Peptide Label: isoform X19
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843029   ⟸   XM_037987101
- Peptide Label: isoform X12
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843042   ⟸   XM_037987114
- Peptide Label: isoform X32
- UniProtKB: A0A0D9RN49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037843049   ⟸   XM_037987121
- Peptide Label: isoform X44


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000013893 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000011983.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.42.10 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro C2_dom UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  Rab_BD UniProtKB/TrEMBL
  Rim-like UniProtKB/TrEMBL
  RIM_Znf UniProtKB/TrEMBL
  Znf_FYVE-rel UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene RIMS1 ENTREZGENE
PANTHER PTHR12157 UniProtKB/TrEMBL
  REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN 1 UniProtKB/TrEMBL
Pfam PDZ UniProtKB/TrEMBL
  PF00168 UniProtKB/TrEMBL
  RIM2a_ZnF UniProtKB/TrEMBL
PROSITE PDZ UniProtKB/TrEMBL
  PS50004 UniProtKB/TrEMBL
  RABBD UniProtKB/TrEMBL
  ZF_FYVE UniProtKB/TrEMBL
SMART PDZ UniProtKB/TrEMBL
  SM00239 UniProtKB/TrEMBL
Superfamily-SCOP SSF49562 UniProtKB/TrEMBL
  SSF50156 UniProtKB/TrEMBL
  SSF57903 UniProtKB/TrEMBL
UniProt A0A0D9RN49 ENTREZGENE, UniProtKB/TrEMBL