TPSG1 (tryptase gamma 1) - Rat Genome Database

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Gene: TPSG1 (tryptase gamma 1) Chlorocebus sabaeus
Analyze
Symbol: TPSG1
Name: tryptase gamma 1
RGD ID: 18461393
Description: ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); idiopathic generalized epilepsy (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: tryptase gamma
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,105,802 - 1,109,613 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606829,982,190 - 29,986,126 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
TPSG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,105,802 - 1,109,613 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606829,982,190 - 29,986,126 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
TPSG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38161,221,651 - 1,225,268 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl161,221,651 - 1,225,793 (-)EnsemblGRCh38hg38GRCh38
GRCh37161,271,651 - 1,275,268 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36161,211,652 - 1,215,255 (-)NCBINCBI36Build 36hg18NCBI36
Build 34161,211,654 - 1,405,893NCBI
Celera161,487,545 - 1,491,148 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef161,204,710 - 1,208,313 (-)NCBIHuRef
CHM1_1161,271,325 - 1,274,928 (-)NCBICHM1_1
T2T-CHM13v2.0161,236,961 - 1,240,578 (-)NCBIT2T-CHM13v2.0
Tpsg1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391725,588,169 - 25,593,416 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1725,588,235 - 25,593,417 (+)EnsemblGRCm39 Ensembl
GRCm381725,369,195 - 25,374,442 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1725,369,273 - 25,374,442 (+)EnsemblGRCm38mm10GRCm38
MGSCv371725,507,498 - 25,511,387 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361725,098,184 - 25,102,042 (+)NCBIMGSCv36mm8
Celera1725,898,349 - 25,902,242 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.53NCBI
Tpsg1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,889,838 - 14,895,605 (+)NCBIGRCr8
mRatBN7.21014,386,352 - 14,390,258 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1014,386,352 - 14,390,258 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1019,127,064 - 19,130,970 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01018,615,933 - 18,619,839 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01014,115,112 - 14,119,018 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01014,724,531 - 14,731,259 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1014,727,180 - 14,731,086 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01014,542,963 - 14,547,658 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41014,617,611 - 14,621,517 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11014,617,610 - 14,621,517 (+)NCBI
Celera1014,058,017 - 14,061,923 (+)NCBICelera
Cytogenetic Map10q12NCBI
LOC100983474
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2181,511,306 - 1,513,899 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1165,291,622 - 5,294,101 (+)NCBINHGRI_mPanPan1
PanPan1.1161,222,801 - 1,231,364 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl161,229,423 - 1,231,364 (-)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl161,222,933 - 1,226,415 (-)Ensemblpanpan1.1panPan2
LOC100688918
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1167,332,108 - 7,380,287 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha168,176,764 - 8,224,935 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0167,253,619 - 7,301,823 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1167,206,968 - 7,255,151 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0167,049,388 - 7,097,530 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0167,117,080 - 7,165,283 (-)NCBIUU_Cfam_GSD_1.0
LOC110256121
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11260,158,818 - 60,162,073 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_037989599   ⟹   XP_037845527
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606829,982,190 - 29,986,126 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037845527 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_037845527   ⟸   XM_037989599


Additional Information

Database Acc Id Source(s)
NCBI Gene TPSG1 ENTREZGENE