GPS1 (G protein pathway suppressor 1)

Gene: GPS1 (G protein pathway suppressor 1) Chlorocebus sabaeus

Analyze

Symbol:

GPS1

Name:

G protein pathway suppressor 1

RGD ID:

18459042

Description:

INVOLVED IN protein deneddylation (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN COP9 signalosome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

COP9 signalosome complex subunit 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	73,952,899 - 73,958,434 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	73,953,146 - 73,962,731 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	45,493,706 - 45,499,255 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein deneddylation (IEA)

Cellular Component

COP9 signalosome (IEA,ISO)

cytoplasm (IEA)

cytosol (IEA)

nucleoplasm (IEA)

nucleus (IEA)

protein-containing complex (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

GPS1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	73,952,899 - 73,958,434 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	73,953,146 - 73,962,731 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	45,493,706 - 45,499,255 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

GPS1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	82,050,932 - 82,057,470 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	82,050,691 - 82,057,470 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	80,008,808 - 80,015,346 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	77,603,052 - 77,608,635 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	77,603,051 - 77,608,635	NCBI
Celera	17	76,604,358 - 76,609,594 (+)	NCBI		Celera
Cytogenetic Map	17	q25.3	NCBI
HuRef	17	75,409,883 - 75,415,466 (+)	NCBI		HuRef
CHM1_1	17	80,095,978 - 80,101,561 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	82,918,090 - 82,924,628 (+)	NCBI		T2T-CHM13v2.0

Gps1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	120,675,086 - 120,679,928 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	120,675,098 - 120,679,928 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	120,784,260 - 120,789,102 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	120,784,272 - 120,789,102 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	120,645,586 - 120,650,416 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	120,600,605 - 120,605,192 (+)	NCBI		MGSCv36	mm8
Celera	11	132,520,539 - 132,525,447 (+)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	84.54	NCBI

Gps1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	106,548,646 - 106,553,729 (+)	NCBI		GRCr8
mRatBN7.2	10	106,050,323 - 106,055,407 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	106,050,388 - 106,055,412 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	111,154,382 - 111,159,429 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	110,617,420 - 110,622,467 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	105,970,846 - 105,975,853 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	109,966,875 - 109,971,912 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	109,966,904 - 109,971,911 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	109,558,358 - 109,563,402 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	10	104,594,178 - 104,599,186 (+)	NCBI		Celera
Cytogenetic Map	10	q32.3	NCBI

Gps1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	1,105,157 - 1,110,067 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955506	1,105,157 - 1,110,129 (-)	NCBI	ChiLan1.0	ChiLan1.0

GPS1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	98,586,381 - 98,592,675 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	103,487,360 - 103,493,397 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	76,456,485 - 76,462,139 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	82,161,611 - 82,166,939 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	82,158,564 - 82,166,939 (+)	Ensembl	panpan1.1		panPan2

GPS1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	261,835 - 265,757 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	262,047 - 265,706 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	864,407 - 869,277 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	855,858 - 860,727 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	855,860 - 861,207 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	880,801 - 885,667 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	1,007,715 - 1,012,569 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	1,086,238 - 1,091,132 (-)	NCBI		UU_Cfam_GSD_1.0

Gps1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	848,626 - 852,454 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936594	5,559,480 - 5,564,485 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936594	5,559,691 - 5,563,333 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPS1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	951,867 - 957,080 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	951,865 - 958,423 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

Gps1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	10,889,987 - 10,895,740 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	10,890,952 - 10,895,740 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36		59
Low		20	1
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008013319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000000178 ⟹ ENSCSAP00000015874

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	16	73,953,146 - 73,962,731 (+)	Ensembl

RefSeq Acc Id:

XM_008013323 ⟹ XP_008011514

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	73,952,906 - 73,958,434 (+)	NCBI
Vero_WHO_p1.0	NW_023666077	45,493,717 - 45,499,255 (+)	NCBI

Sequence:

show sequence

CCGGAAGTGGACGGCACGCCGCGGCGGGGTGGGTGCAAGATGCCGCTGCCGGTTCAGGTGTTTA
ACTTGCAGGGGGCTGTGGAGCCCATGCAGATCGACGTGGACCCCCAGGAAGACCCGCAGAATGC
ACCCGACGTCAACTACGTGGTGGAGAACCCCAGCCTGGATCTGGAGCAGTACGCAGCCAGTTAC
AGCGGCCTGATGCGCATCGAACGGCTGCAGTTCATTGCTGATCACTGCCCCACGCTGCGGGTGG
AGGCCCTGAAGATGGCCCTGTCGTTCGTGCAGAGAACCTTTAATGTGGACATGTATGAGGAAAT
CCACCGCAAGCTCTCAGAGGCCACCAGGTCCTCTCTCAGGGAGCTGCAGAACGCACCCGATGCC
ATCCCTGAGAGTGGCGTGGAGCCCCCACCCCTGGACACGGCCTGGGTGGAGGCCACGCGGAAGA
AGGCCTTGCTGAAGCTGGAGAAGCTGGACACGGACCTGAAGAACTACAAAGGCAACTCCATCAA
GGAGAGCATCCGGCGCGGCCACGACGACCTGGGCGACCATTACCTGGACTGTGGGGACCTCAGC
AACGCCCTCAAGTGCTACTCCCGGGCCCGGGACTACTGCACCAGCGCCAAGCATGTCATCAACA
TGTGCCTCAACGTCATCAAGGTCAGCGTCTACTTACAGAATTGGTCTCATGTGCTCAGCTATGT
CAGCAAGGCTGAGTCTACCCCGGAGATTGCTGAGCAGCGAGGAGAGCGTGACAGCCAGACCCAG
GCCATCCTCACCAAGCTCAAGTGTGCCGCAGGTTTGGCGGAGCTGGCTGCCAGGAAGTACAAGC
AGGCTGCCAAGTGCCTCCTGCTGGCTTCCTTTGATCACTGCGACTTCCCTGAGCTGCTGTCCCC
CAGCAACGTGGCCATCTACGGTGGCCTGTGTGCCTTGGCTACCTTTGACCGGCAGGAGCTGCAG
CGCAATGTCATCTCCAGTAGCTCCTTCAAGTTGTTCTTGGAGCTGGAGCCGCAGGTCCGAGACA
TCATCTTCAAATTCTACGAGTCCAAGTACGCCTCATGCCTCAAGATGCTGGATGAGATGAAGGA
CAACCTGCTCCTGGACATGTATTTGGCTCCCCACGTCAGGACGCTGTACACCCAGATTCGCAAC
CGTGCCCTCATCCAGTATTTCAGCCCCTACGTGTCAGCCGACATGCATAGGATGGCGGCGGCCT
TCAACACCACAGTGGCTGCCCTGGAGGACGAGCTGACGCAGCTAATCCTGGAGGGGCTGATCAG
TGCCCGCGTAGACTCGCACAGCAAGATCCTCTACGCCCGGGATGTGGATCAGCGCAGCACCACT
TTTGAGAAGTCTCTGCTGATGGGCAAGGAGTTCCAGCGCCGCGCCAAGGCCATGATGCTGCGAG
CAGCTGTGCTCCGCAACCAGATCCACGTCAAGTCCCCACCCAGAGAAGGGAGCCAGGGGGAGCT
GACTCCAGCCAACAGCCAGTCTCGGATGAGCACCAACATGTGAGGGGTGGACCTTGGCCTCCAG
GACATCTGCATCCCCTCCCCATCTCCACGGACCTCCTGACCTCCAGGCGGCTCAGTGCTGCCTG
CAGCCCAGCTAAGAGGCCTGGCCACTGGGTGCCCCCCAGCCTGCATGCCCTTGCTGGGGCTGGG
GAGGCAGGCGGCTGCTAGTTGTGGTCCTTCCTGGAAGGAGAGGCCTGCAGGGCTCGACCCTGTG
GGTTTCTGTCCCCAGGGAGCAGACTGTGCGGCACCCAGGTGCAGCAGCACCACTTCCCAGACCC
CTCCTGTTCCCGCCTCTGTCAGGTGCAGACAAGTGGGCGGTATCCATTAAAAAGCAGACTGAGC
GTT

hide sequence

RefSeq Acc Id:

XM_008013324 ⟹ XP_008011515

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	73,952,938 - 73,958,428 (+)	NCBI
Vero_WHO_p1.0	NW_023666077	45,493,706 - 45,499,255 (+)	NCBI

Sequence:

show sequence

GTGCAAGATGCCGCTGCCGGTTCAGGTGTTTAACTTGCAGGGGGCTGTGGAGCCCATGCAGATC
GACGTGGACCCCCAGGAAGACCCGCAGAATGCACCCGACGTCAACTACGTGGTGGAGAACCCCA
GCCTGGATCTGGAGCAGTACGCAGCCAGTTACAGCGGCCTGATGCGCATCGAACGGCTGCAGTT
CATTGCTGATCACTGCCCCACGCTGCGGGTGGAGGCCCTGAAGATGGCCCTGTCGTTCGTGCAG
AGAACCTTTAATGTGGACATGTATGAGGAAATCCACCGCAAGCTCTCAGAGGCCACCAGGGAGC
TGCAGAACGCACCCGATGCCATCCCTGAGAGTGGCGTGGAGCCCCCACCCCTGGACACGGCCTG
GGTGGAGGCCACGCGGAAGAAGGCCTTGCTGAAGCTGGAGAAGCTGGACACGGACCTGAAGAAC
TACAAAGGCAACTCCATCAAGGAGAGCATCCGGCGCGGCCACGACGACCTGGGCGACCATTACC
TGGACTGTGGGGACCTCAGCAACGCCCTCAAGTGCTACTCCCGGGCCCGGGACTACTGCACCAG
CGCCAAGCATGTCATCAACATGTGCCTCAACGTCATCAAGGTCAGCGTCTACTTACAGAATTGG
TCTCATGTGCTCAGCTATGTCAGCAAGGCTGAGTCTACCCCGGAGATTGCTGAGCAGCGAGGAG
AGCGTGACAGCCAGACCCAGGCCATCCTCACCAAGCTCAAGTGTGCCGCAGGTTTGGCGGAGCT
GGCTGCCAGGAAGTACAAGCAGGCTGCCAAGTGCCTCCTGCTGGCTTCCTTTGATCACTGCGAC
TTCCCTGAGCTGCTGTCCCCCAGCAACGTGGCCATCTACGGTGGCCTGTGTGCCTTGGCTACCT
TTGACCGGCAGGAGCTGCAGCGCAATGTCATCTCCAGTAGCTCCTTCAAGTTGTTCTTGGAGCT
GGAGCCGCAGGTCCGAGACATCATCTTCAAATTCTACGAGTCCAAGTACGCCTCATGCCTCAAG
ATGCTGGATGAGATGAAGGACAACCTGCTCCTGGACATGTATTTGGCTCCCCACGTCAGGACGC
TGTACACCCAGATTCGCAACCGTGCCCTCATCCAGTATTTCAGCCCCTACGTGTCAGCCGACAT
GCATAGGATGGCGGCGGCCTTCAACACCACAGTGGCTGCCCTGGAGGACGAGCTGACGCAGCTA
ATCCTGGAGGGGCTGATCAGTGCCCGCGTAGACTCGCACAGCAAGATCCTCTACGCCCGGGATG
TGGATCAGCGCAGCACCACTTTTGAGAAGTCTCTGCTGATGGGCAAGGAGTTCCAGCGCCGCGC
CAAGGCCATGATGCTGCGAGCAGCTGTGCTCCGCAACCAGATCCACGTCAAGTCCCCACCCAGA
GAAGGGAGCCAGGGGGAGCTGACTCCAGCCAACAGCCAGTCTCGGATGAGCACCAACATGTGAG
GGGTGGACCTTGGCCTCCAGGACATCTGCATCCCCTCCCCATCTCCACGGACCTCCTGACCTCC
AGGCGGCTCAGTGCTGCCTGCAGCCCAGCTAAGAGGCCTGGCCACTGGGTGCCCCCCAGCCTGC
ATGCCCTTGCTGGGGCTGGGGAGGCAGGCGGCTGCTAGTTGTGGTCCTTCCTGGAAGGAGAGGC
CTGCAGGGCTCGACCCTGTGGGTTTCTGTCCCCAGGGAGCAGACTGTGCGGCACCCAGGTGCAG
CAGCACCACTTCCCAGACCCCTCCTGTTCCCGCCTCTGTCAGGTGCAGACAAGTGGGCGGTATC
CATTAAAAAGCAGACTG

hide sequence

RefSeq Acc Id:

XM_008013325 ⟹ XP_008011516

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	73,952,938 - 73,958,428 (+)	NCBI
Vero_WHO_p1.0	NW_023666077	45,493,706 - 45,499,255 (+)	NCBI

Sequence:

show sequence

GTGCAAGATGCCGCTGCCGGTTCAGGTGTTTAACTTGCAGGGGGCTGTGGAGCCCATGCAGATC
GACGTGGACCCCCAGGAAGACCCGCAGAATGCACCCGACGTCAACTACGTGGTGGAGAACCCCA
GCCTGGATCTGGAGCAGTACGCAGCCAGTTACAGCGGCCTGATGCGCATCGAACGGCTGCAGTT
CATTGCTGATCACTGCCCCACGCTGCGGGTGGAGGCCCTGAAGATGGCCCTGTCGTTCGTGCAG
AGAACCTTTAATGTGGACATGTATGAGGAAATCCACCGCAAGCTCTCAGAGGCCACCAGGGAGC
TGCAGAACGCACCCGATGCCATCCCTGAGAGTGGCGTGGAGCCCCCACCCCTGGACACGGCCTG
GGTGGAGGCCACGCGGAAGAAGGCCTTGCTGAAGCTGGAGAAGCTGGACACGGACCTGAAGAAC
TACAAAGGCAACTCCATCAAGGAGAGCATCCGGCGCGGCCACGACGACCTGGGCGACCATTACC
TGGACTGTGGGGACCTCAGCAACGCCCTCAAGTGCTACTCCCGGGCCCGGGACTACTGCACCAG
CGCCAAGCATGTCATCAACATGTGCCTCAACGTCATCAAGGTCAGCGTCTACTTACAGAATTGG
TCTCATGTGCTCAGCTATGTCAGCAAGGCTGAGTCTACCCCGGAGATTGCTGAGCGAGGAGAGC
GTGACAGCCAGACCCAGGCCATCCTCACCAAGCTCAAGTGTGCCGCAGGTTTGGCGGAGCTGGC
TGCCAGGAAGTACAAGCAGGCTGCCAAGTGCCTCCTGCTGGCTTCCTTTGATCACTGCGACTTC
CCTGAGCTGCTGTCCCCCAGCAACGTGGCCATCTACGGTGGCCTGTGTGCCTTGGCTACCTTTG
ACCGGCAGGAGCTGCAGCGCAATGTCATCTCCAGTAGCTCCTTCAAGTTGTTCTTGGAGCTGGA
GCCGCAGGTCCGAGACATCATCTTCAAATTCTACGAGTCCAAGTACGCCTCATGCCTCAAGATG
CTGGATGAGATGAAGGACAACCTGCTCCTGGACATGTATTTGGCTCCCCACGTCAGGACGCTGT
ACACCCAGATTCGCAACCGTGCCCTCATCCAGTATTTCAGCCCCTACGTGTCAGCCGACATGCA
TAGGATGGCGGCGGCCTTCAACACCACAGTGGCTGCCCTGGAGGACGAGCTGACGCAGCTAATC
CTGGAGGGGCTGATCAGTGCCCGCGTAGACTCGCACAGCAAGATCCTCTACGCCCGGGATGTGG
ATCAGCGCAGCACCACTTTTGAGAAGTCTCTGCTGATGGGCAAGGAGTTCCAGCGCCGCGCCAA
GGCCATGATGCTGCGAGCAGCTGTGCTCCGCAACCAGATCCACGTCAAGTCCCCACCCAGAGAA
GGGAGCCAGGGGGAGCTGACTCCAGCCAACAGCCAGTCTCGGATGAGCACCAACATGTGAGGGG
TGGACCTTGGCCTCCAGGACATCTGCATCCCCTCCCCATCTCCACGGACCTCCTGACCTCCAGG
CGGCTCAGTGCTGCCTGCAGCCCAGCTAAGAGGCCTGGCCACTGGGTGCCCCCCAGCCTGCATG
CCCTTGCTGGGGCTGGGGAGGCAGGCGGCTGCTAGTTGTGGTCCTTCCTGGAAGGAGAGGCCTG
CAGGGCTCGACCCTGTGGGTTTCTGTCCCCAGGGAGCAGACTGTGCGGCACCCAGGTGCAGCAG
CACCACTTCCCAGACCCCTCCTGTTCCCGCCTCTGTCAGGTGCAGACAAGTGGGCGGTATCCAT
TAAAAAGCAGACTG

hide sequence

RefSeq Acc Id:

XM_008013328 ⟹ XP_008011519

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	73,952,899 - 73,958,428 (+)	NCBI
Vero_WHO_p1.0	NW_023666077	45,493,711 - 45,499,255 (+)	NCBI

Sequence:

show sequence

CGCTGCCCCGGAAGTGGACGGCACGCCGCGGCGGGGTGGGTGCAAGATGCCGCTGCCGGTTCAG
GTGTTTAACTTGCAGCAGTAGGTCAGACCTCCTCCTGCCCGGTACGGCCGGGGACTTCAGCCTG
AGCGCCAGCCTGTCGGCCTGTACGCTGCTCTACGAGGGGGCTGTGGAGCCCATGCAGATCGACG
TGGACCCCCAGGAAGACCCGCAGAATGCACCCGACGTCAACTACGTGGTGGAGAACCCCAGCCT
GGATCTGGAGCAGTACGCAGCCAGTTACAGCGGCCTGATGCGCATCGAACGGCTGCAGTTCATT
GCTGATCACTGCCCCACGCTGCGGGTGGAGGCCCTGAAGATGGCCCTGTCGTTCGTGCAGAGAA
CCTTTAATGTGGACATGTATGAGGAAATCCACCGCAAGCTCTCAGAGGCCACCAGGTCCTCTCT
CAGGGAGCTGCAGAACGCACCCGATGCCATCCCTGAGAGTGGCGTGGAGCCCCCACCCCTGGAC
ACGGCCTGGGTGGAGGCCACGCGGAAGAAGGCCTTGCTGAAGCTGGAGAAGCTGGACACGGACC
TGAAGAACTACAAAGGCAACTCCATCAAGGAGAGCATCCGGCGCGGCCACGACGACCTGGGCGA
CCATTACCTGGACTGTGGGGACCTCAGCAACGCCCTCAAGTGCTACTCCCGGGCCCGGGACTAC
TGCACCAGCGCCAAGCATGTCATCAACATGTGCCTCAACGTCATCAAGGTCAGCGTCTACTTAC
AGAATTGGTCTCATGTGCTCAGCTATGTCAGCAAGGCTGAGTCTACCCCGGAGATTGCTGAGCA
GCGAGGAGAGCGTGACAGCCAGACCCAGGCCATCCTCACCAAGCTCAAGTGTGCCGCAGGTTTG
GCGGAGCTGGCTGCCAGGAAGTACAAGCAGGCTGCCAAGTGCCTCCTGCTGGCTTCCTTTGATC
ACTGCGACTTCCCTGAGCTGCTGTCCCCCAGCAACGTGGCCATCTACGGTGGCCTGTGTGCCTT
GGCTACCTTTGACCGGCAGGAGCTGCAGCGCAATGTCATCTCCAGTAGCTCCTTCAAGTTGTTC
TTGGAGCTGGAGCCGCAGGTCCGAGACATCATCTTCAAATTCTACGAGTCCAAGTACGCCTCAT
GCCTCAAGATGCTGGATGAGATGAAGGACAACCTGCTCCTGGACATGTATTTGGCTCCCCACGT
CAGGACGCTGTACACCCAGATTCGCAACCGTGCCCTCATCCAGTATTTCAGCCCCTACGTGTCA
GCCGACATGCATAGGATGGCGGCGGCCTTCAACACCACAGTGGCTGCCCTGGAGGACGAGCTGA
CGCAGCTAATCCTGGAGGGGCTGATCAGTGCCCGCGTAGACTCGCACAGCAAGATCCTCTACGC
CCGGGATGTGGATCAGCGCAGCACCACTTTTGAGAAGTCTCTGCTGATGGGCAAGGAGTTCCAG
CGCCGCGCCAAGGCCATGATGCTGCGAGCAGCTGTGCTCCGCAACCAGATCCACGTCAAGTCCC
CACCCAGAGAAGGGAGCCAGGGGGAGCTGACTCCAGCCAACAGCCAGTCTCGGATGAGCACCAA
CATGTGAGGGGTGGACCTTGGCCTCCAGGACATCTGCATCCCCTCCCCATCTCCACGGACCTCC
TGACCTCCAGGCGGCTCAGTGCTGCCTGCAGCCCAGCTAAGAGGCCTGGCCACTGGGTGCCCCC
CAGCCTGCATGCCCTTGCTGGGGCTGGGGAGGCAGGCGGCTGCTAGTTGTGGTCCTTCCTGGAA
GGAGAGGCCTGCAGGGCTCGACCCTGTGGGTTTCTGTCCCCAGGGAGCAGACTGTGCGGCACCC
AGGTGCAGCAGCACCACTTCCCAGACCCCTCCTGTTCCCGCCTCTGTCAGGTGCAGACAAGTGG
GCGGTATCCATTAAAAAGCAGACTG

hide sequence

RefSeq Acc Id:

XM_037993404 ⟹ XP_037849332

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	45,493,734 - 45,499,255 (+)	NCBI

RefSeq Acc Id:

XM_037993405 ⟹ XP_037849333

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	45,493,734 - 45,499,255 (+)	NCBI

RefSeq Acc Id:

XM_037993406 ⟹ XP_037849334

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	45,493,734 - 45,499,255 (+)	NCBI

RefSeq Acc Id:

XM_037993407 ⟹ XP_037849335

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	45,493,734 - 45,499,255 (+)	NCBI

RefSeq Acc Id:

XM_037993408 ⟹ XP_037849336

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	45,493,739 - 45,499,255 (+)	NCBI

RefSeq Acc Id:

XM_037993409 ⟹ XP_037849337

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	45,493,739 - 45,499,255 (+)	NCBI

RefSeq Acc Id:

XM_037993410 ⟹ XP_037849338

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	45,493,711 - 45,499,255 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008011514	(Get FASTA)	NCBI Sequence Viewer
	XP_008011515	(Get FASTA)	NCBI Sequence Viewer
	XP_008011516	(Get FASTA)	NCBI Sequence Viewer
	XP_008011519	(Get FASTA)	NCBI Sequence Viewer
	XP_037849332	(Get FASTA)	NCBI Sequence Viewer
	XP_037849333	(Get FASTA)	NCBI Sequence Viewer
	XP_037849334	(Get FASTA)	NCBI Sequence Viewer
	XP_037849335	(Get FASTA)	NCBI Sequence Viewer
	XP_037849336	(Get FASTA)	NCBI Sequence Viewer
	XP_037849337	(Get FASTA)	NCBI Sequence Viewer
	XP_037849338	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000015874.1

RefSeq Acc Id:	XP_008011519 ⟸ XM_008013328
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_008011514 ⟸ XM_008013323
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_008011515 ⟸ XM_008013324
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_008011516 ⟸ XM_008013325
- Peptide Label:	isoform X9

RefSeq Acc Id:

ENSCSAP00000015874 ⟸ ENSCSAT00000000178

RefSeq Acc Id:	XP_037849338 ⟸ XM_037993410
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_037849332 ⟸ XM_037993404
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_037849333 ⟸ XM_037993405
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_037849334 ⟸ XM_037993406
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_037849335 ⟸ XM_037993407
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_037849336 ⟸ XM_037993408
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_037849337 ⟸ XM_037993409
- Peptide Label:	isoform X7

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000002163	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000000178.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.570	UniProtKB/TrEMBL
InterPro	CSN1_C	UniProtKB/TrEMBL
	PCI_dom	UniProtKB/TrEMBL
	Rpn7/CSN1	UniProtKB/TrEMBL
	Rpn7_N	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
NCBI Gene	GPS1	ENTREZGENE
PANTHER	PTHR14145	UniProtKB/TrEMBL
	PTHR14145:SF2	UniProtKB/TrEMBL
Pfam	CSN1_C	UniProtKB/TrEMBL
	PCI	UniProtKB/TrEMBL
	RPN7	UniProtKB/TrEMBL
PROSITE	PCI	UniProtKB/TrEMBL
SMART	PINT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
UniProt	A0A0D9S4T5_CHLSB	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar