USH1C (USH1 protein network component harmonin)

Gene: USH1C (USH1 protein network component harmonin) Chlorocebus sabaeus

Analyze

Symbol:

USH1C

Name:

USH1 protein network component harmonin

RGD ID:

18449145

Description:

ENCODES a protein that exhibits spectrin binding (inferred); INVOLVED IN actin filament bundle assembly (ortholog); inner ear auditory receptor cell differentiation (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Autosomal Recessive Nonsyndromic Deafness 18 (ortholog); autosomal recessive nonsyndromic deafness 18A (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog); stereocilium (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

harmonin

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	47,428,181 - 47,477,578 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	47,437,596 - 47,477,834 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	144,848,688 - 144,898,245 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive nonsyndromic deafness (ISO)

Autosomal Recessive Nonsyndromic Deafness 18 (ISO)

autosomal recessive nonsyndromic deafness 18A (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

Hearing Loss (ISO)

intellectual disability (ISO)

Meniere's disease (ISO)

progressive myoclonus epilepsy 7 (ISO)

retinitis pigmentosa (ISO)

retinitis pigmentosa-deafness syndrome (ISO)

sensorineural hearing loss (ISO)

Usher syndrome (ISO)

Usher syndrome type 1 (ISO)

Usher Syndrome Type 1B (ISO)

Usher syndrome type 1C (ISO)

Usher syndrome type 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament bundle assembly (ISO)

brush border assembly (IEA)

equilibrioception (IEA)

G2/M transition of mitotic cell cycle (IEA)

inner ear auditory receptor cell differentiation (IEA,ISO)

inner ear morphogenesis (IEA,ISO)

inner ear receptor cell stereocilium organization (IEA,ISO)

neuromuscular process controlling balance (ISO)

parallel actin filament bundle assembly (ISO)

photoreceptor cell maintenance (IEA)

protein localization to microvillus (IEA)

protein-containing complex assembly (IEA)

regulation of microvillus length (ISO)

retinal cone cell development (IEA)

sensory perception of light stimulus (IEA)

sensory perception of sound (IEA,ISO)

Cellular Component

apical part of cell (IEA)

brush border (IEA)

cell projection (IEA)

cilium (IEA)

cytoplasm (IEA)

cytosol (IEA)

microvillus (IEA)

photoreceptor inner segment (IEA,ISO)

photoreceptor outer segment (ISO)

plasma membrane (IEA)

stereocilia ankle link complex (IEA)

stereocilium (ISO)

stereocilium tip (IEA)

synapse (ISO)

upper tip-link density (ISO)

Molecular Function

protein binding (ISO)

spectrin binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

auditory mechanotransduction pathway (ISO)

retinitis pigmentosa pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

USH1C
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	47,428,181 - 47,477,578 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	47,437,596 - 47,477,834 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	144,848,688 - 144,898,245 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

USH1C
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	17,493,900 - 17,544,416 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	17,493,895 - 17,544,416 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	17,515,447 - 17,565,963 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	17,472,018 - 17,522,539 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	17,645,289 - 17,695,946 (-)	NCBI		Celera
Cytogenetic Map	11	p15.1	NCBI
HuRef	11	17,199,243 - 17,249,828 (-)	NCBI		HuRef
CHM1_1	11	17,515,265 - 17,565,784 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	17,591,495 - 17,642,149 (-)	NCBI		T2T-CHM13v2.0

Ush1c
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	45,844,774 - 45,887,984 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	45,844,774 - 45,887,927 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	46,195,350 - 46,238,490 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	46,195,350 - 46,238,503 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	53,450,721 - 53,493,860 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	46,063,399 - 46,106,532 (-)	NCBI		MGSCv36	mm8
Celera	7	41,668,925 - 41,712,073 (-)	NCBI		Celera
Cytogenetic Map	7	B3	NCBI
cM Map	7	29.66	NCBI

Ush1c
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	105,831,719 - 105,880,082 (-)	NCBI		GRCr8
mRatBN7.2	1	96,695,303 - 96,743,671 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	96,695,307 - 96,743,671 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	102,081,448 - 102,129,809 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	110,553,421 - 110,601,783 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	103,843,796 - 103,892,162 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	102,207,096 - 102,256,779 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	102,207,096 - 102,255,459 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	103,291,318 - 103,340,928 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	96,720,185 - 96,768,550 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	96,798,295 - 96,846,661 (-)	NCBI
Celera	1	90,943,948 - 90,992,307 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

Ush1c
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	32,298,759 - 32,351,505 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955414	32,303,045 - 32,351,401 (-)	NCBI	ChiLan1.0	ChiLan1.0

USH1C
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	19,827,448 - 19,877,874 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	19,787,920 - 19,838,443 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	17,548,501 - 17,598,923 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	17,233,854 - 17,284,256 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	17,233,854 - 17,284,256 (-)	Ensembl	panpan1.1		panPan2

USH1C
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	40,055,786 - 40,100,685 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	40,055,730 - 40,101,430 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	39,555,651 - 39,600,543 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	41,161,015 - 41,205,900 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	41,160,539 - 41,205,845 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	40,173,714 - 40,218,550 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	40,380,893 - 40,425,786 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	40,719,734 - 40,764,634 (-)	NCBI		UU_Cfam_GSD_1.0

Ush1c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	45,513,303 - 45,560,765 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936528	1,552,289 - 1,594,801 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936528	1,552,175 - 1,594,740 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USH1C
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	41,593,802 - 41,647,247 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	41,593,793 - 41,646,777 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	44,613,841 - 44,706,204 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Ush1c
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	9,105,990 - 9,153,663 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	9,097,466 - 9,153,602 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium		1	40
Low	32	19	20
Below cutoff	4

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008005284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005286	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008005356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000002902 ⟹ ENSCSAP00000001195

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	1	47,437,596 - 47,477,834 (+)	Ensembl

RefSeq Acc Id:

XM_008005286 ⟹ XP_008003477

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	47,428,189 - 47,477,578 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	144,848,703 - 144,898,245 (+)	NCBI

Sequence:

show sequence

CTCAGGCCGCGTCCCCAGCTCCGAGGGCGGCTGCCCGGGTCGCGGTCGCGGTTCCTTCCAGCTC
CTGGCAGCCGGGCACCCGAAGGAACCGGTCGTTCAACGACACAGCTGGACCTGGCCCAACCATG
GACCGAAAAGTGGCCCGAGAATTCCGGCATAAGGTGGATTTTCTGATTGAAAATGATGCAGAGA
AGGACTATCTCTATGATGTGCTGCGAATGTACCACCAGACCATGGACGTGGCTGTGCTCGTGGG
AGACCTGAAGCTGGTCATCAATGAACCCAGCCGCCTGCCTCTGTTTGATGCCATTCGGCCCCTG
ATCCCACTGAAGCACCAGGTGGAATATGATCAGCTGACCCCCCGGCGCTCCAGGAAGCTGAAGG
AGGTGCGTCTGGACCGTCTGCACCCCGAAGGCCTTGGCTTGAGCGTGCGTGGTGGCCTGGAGTT
TGGCTGTGGGCTCTTCATCTCCCACCTCATCAAAGGCGGTCAGGCAGACAGTGTCGGGCTCCAG
GTAGGGGACGAGATCGTCCGGATCAATGGATATTCCATCTCCTCCTGTACCCATGAGGAGGTCA
TCAACCTCATCCGAACCAAGAAAACTGTGTCCATCAAAGTGAGACACATTGGCCTGATCCCCGT
GAAGAGCTCTCCTGATGAGCCCCTCAAGTGGCAGTATGTGGATCAGTTTGTGTCAGAATCTGGG
GGGGGGCGAGGCAGCCTGGGCTCCCCTGGAAATCGGGAAAACAAGGAGAAGAAGGTCTTCATCA
GCCTGGTGGGCTCCCGGGGCCTTGGCTGCAGCATTTCCAGCGGCCCCATCCAGAAGCCTGGCAT
CTTCATCAGCCACGTGAAACCTGGCTCCCTGTCCGCTGAGGTGGGATTGGAGACAGGGGACCAG
ATTGTCGAAGTGAATGGCATCGACTTCTCTAACCTGGACCACAAGGAGGCTGTGAACGTGCTGA
AGAGTAGCCGCAGCCTGACCATCTCCATCGTAGCTGGGGCTGGCCGGGAGCTGTTCATGACAGA
CCGGGAGCGGCTGGCAGAGGCGCGGCAGCGTGAGCTGCAGCGGCAGGAGCTTCTCATGCAGAAG
CGGCTGGCGATGGAGTCCAACAAGATCCTCCAGGAGCAGCAGGAGATGGAGCAGCAAAGGAGAA
AAGAAATTGCCCAGAAGGCAGCAGAGGAAAATGAGAGATACCGGAAGGAGATGGAACAGATTGT
GGAGGAGGAAGAGAAGTTTAAGAAGCAATGGGAAGAAGACTGGGGCTCAAAGGAACAGCTACTC
TTGCCTAAAACCATCACTGCTGAGGTGCACCCAGTACCCCTTCGCAAGCCAAAGTATCAGGGAG
TGGAGCCCGAGCTCGAGCCCACAGATGACCCGGATGGAGGCACGGACGAGCAGGGAGAGCAGAA
AGGAAAAGATAAGAAGAAAGCCAAGTATGACAGCCTGCAGGACTTGAGAAAGAATAAGAAAGAA
CTGGAGTTTGAGCAAAAGCTTTACAAAGAGAAAGAGGAAATGCTGGAGAAAGAAAAGCAGCTAA
AGATCAACCGGCTGGCCCAGGAGGTGTCTGAGACAGAGCGGGAAGACCTTGAAGAATCGGAAAA
GATTCAATATTGGGTGGAGAGGCTCTGTCAAACGCGCCTCGAGCAGATTTCCTCTGCTGATAAT
GAGATTTCAGAGATGACCACAGGGCCCCCACCTCCTCTGCCTTCTGTGTCTCCCCTGGCCCCAC
CCTTGAGACGCTTCGCAGGCGGACTGCACCTGCACACCACTGACCTGGACGACATCCCTTTGGA
CATGTTCTACTATCCCCCCAAGACTCCCTCTGCCTTGCCTGTGATGCCCCACCCTCCACCCTCC
AACCCACCCCACAAGGTCCCAGCGCCTCCTGTCCTTCCCTCATCTGGCCATGTGAGCGCCTCAT
CTTCCCCATGGGTGCAGCGCACTCCACCCCCCATTCCCATCCCTCCCCCTCCATCCATTCCCAC
CCAAGACCTCACTCCCACCCGCCCACTGCCCTCGGCACTGGAAGAAGCACTGGGCAACCACCCC
TTCCGCACTGGGGACACAGGCAATCCAGTGGAGGACTGGGAGGCAAAGAACCACAGTGGGAAGC
CCTCCAACTCCCCTGTCCCTGAACGGAGCTTCCCACCCACCCCAAAGACATTTTGCCCAAGCCC
ACAGCCTCCACGAGGCCCTGGCGTGTCCACCATCTCCAAACCTGTCATGGTCCACCAGGAGCCC
AATTTCATCTACAGGCCAGCTGTGAAATCTGAAGTTCTGCCACAGGAGATGTTGAAGAGGATGG
TGGTTTATCAGACAGCATTCAGACAAGATTTTCGGAAATATGAGGAAGGCTTCGACCCCTACTC
CATGTTCACCCCAGAGCAGATCATGGGGAAGGACGTCCGGCTCCTACGCATTAAGAAGGAGAGA
TCCTTAGACCTGGCCCTGGAAGGCGGTGTGGACTCCCCCATTGGGAAGGTGGTTGTTTCTGCTG
TGTACGAGGGGGGAGCTGCTGAGCGGCACGGTGGCATTGTGAAAGGGGACGAGATCATGGCAGT
CAATGGCAAGACTGTGACAGACTACACCCTGGCGGAGGCTGAGGCTGCCCTGCAGAAGGCCTGG
AATCAGGGTGGGGACTGGATCGACCTTGTGGTTGCCGTTTGCCCCCCAAAGGAGTATGATGATG
AGCTGACCTTCTTCTGAAGTCCAAAAGGGGAAACCAAATTCACCCCTAGAAAACAGTGAGCTCT
GGCCCCACCTCCTGAACACAAAGCCTTGAGACCAGCCTTGAGAGAGGCCACACTGCACACACCG
GACGGCATCCCTGGGACCTGAACCTAGCACCCAGGAATCTCAAACTCCCTTTGGCCCTGAACCA
GAGTCAGATAAGGAACAGCTTGGGCCACTCTGATGAAGGCCAACATGGAGGAGAGGGAGCAGCC
AGCCGTTTGGGAGAAGATCTCAGGGATCCAGACTCTCATTCCTTTCCTCTGGCCCAGTGAATTC
GGTCTCTCCCAGCCCTGGGGGACTCCTTCCTTGAACCCTAATAACACCCCACCTGGAGTCTCTC
TCTCTCCATCCCTCTCCTCTGGCCTCTGCTCTAATTGCTGATAGGATTGTCACTGCATACCTTA
CTCTGAGCTCATTAATAAAATAAACATTTCTTTTCCAGCTTA

hide sequence

RefSeq Acc Id:

XM_008005301 ⟹ XP_008003492

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	47,428,186 - 47,477,578 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	144,848,700 - 144,898,245 (+)	NCBI

Sequence:

show sequence

GCGCTCAGGCCGCGTCCCCAGCTCCGAGGGCGGCTGCCCGGGTCGCGGTCGCGGTTCCTTCCAG
CTCCTGGCAGCCGGGCACCCGAAGGAACCGGTCGTTCAACGACACAGCTGGACCTGGCCCAACC
ATGGACCGAAAAGTGGCCCGAGAATTCCGGCATAAGGACCATGGACGTGGCTGTGCTCGTGGGA
GACCTGAAGCTGGTCATCAATGAACCCAGCCGCCTGCCTCTGTTTGATGCCATTCGGCCCCTGA
TCCCACTGAAGCACCAGGTGGAATATGATCAGCTGACCCCCCGGCGCTCCAGGAAGCTGAAGGA
GGTGCGTCTGGACCGTCTGCACCCCGAAGGCCTTGGCTTGAGCGTGCGTGGTGGCCTGGAGTTT
GGCTGTGGGCTCTTCATCTCCCACCTCATCAAAGGCGGTCAGGCAGACAGTGTCGGGCTCCAGG
TAGGGGACGAGATCGTCCGGATCAATGGATATTCCATCTCCTCCTGTACCCATGAGGAGGTCAT
CAACCTCATCCGAACCAAGAAAACTGTGTCCATCAAAGTGAGACACATTGGCCTGATCCCCGTG
AAGAGCTCTCCTGATGAGCCCCTCAAGTGGCAGTATGTGGATCAGTTTGTGTCAGAATCTGGGG
GGGGGCGAGGCAGCCTGGGCTCCCCTGGAAATCGGGAAAACAAGGAGAAGAAGGTCTTCATCAG
CCTGGTGGGCTCCCGGGGCCTTGGCTGCAGCATTTCCAGCGGCCCCATCCAGAAGCCTGGCATC
TTCATCAGCCACGTGAAACCTGGCTCCCTGTCCGCTGAGGTGGGATTGGAGACAGGGGACCAGA
TTGTCGAAGTGAATGGCATCGACTTCTCTAACCTGGACCACAAGGAGGCTGTGAACGTGCTGAA
GAGTAGCCGCAGCCTGACCATCTCCATCGTAGCTGGGGCTGGCCGGGAGCTGTTCATGACAGAC
CGGGAGCGGCTGGCAGAGGCGCGGCAGCGTGAGCTGCAGCGGCAGGAGCTTCTCATGCAGAAGC
GGCTGGCGATGGAGTCCAACAAGATCCTCCAGGAGCAGCAGGAGATGGAGCAGCAAAGGAGAAA
AGAAATTGCCCAGAAGGCAGCAGAGGAAAATGAGAGATACCGGAAGGAGATGGAACAGATTGTG
GAGGAGGAAGAGAAGTTTAAGAAGCAATGGGAAGAAGACTGGGGCTCAAAGGAACAGCTACTCT
TGCCTAAAACCATCACTGCTGAGGTGCACCCAGTACCCCTTCGCAAGCCAAAGTATCAGGGAGT
GGAGCCCGAGCTCGAGCCCACAGATGACCCGGATGGAGGCACGGACGAGCAGGGAGAGCAGAAA
GGAAAAGATAAGAAGAAAGCCAAGTATGACAGCCTGCAGGACTTGAGAAAGAATAAGAAAGAAC
TGGAGTTTGAGCAAAAGCTTTACAAAGAGAAAGAGGAAATGCTGGAGAAAGAAAAGCAGCTAAA
GATCAACCGGCTGGCCCAGGAGGTGTCTGAGACAGAGCGGGAAGACCTTGAAGAATCGGAAAAG
ATTCAATATTGGGTGGAGAGGCTCTGTCAAACGCGCCTCGAGCAGATTTCCTCTGCTGATAATG
AGATTTCAGAGATGACCACAGGGCCCCCACCTCCTCTGCCTTCTGTGTCTCCCCTGGCCCCACC
CTTGAGACGCTTCGCAGGCGGACTGCACCTGCACACCACTGACCTGGACGACATCCCTTTGGAC
ATGTTCTACTATCCCCCCAAGACTCCCTCTGCCTTGCCTGTGATGCCCCACCCTCCACCCTCCA
ACCCACCCCACAAGGTCCCAGCGCCTCCTGTCCTTCCCTCATCTGGCCATGTGAGCGCCTCATC
TTCCCCATGGGTGCAGCGCACTCCACCCCCCATTCCCATCCCTCCCCCTCCATCCATTCCCACC
CAAGACCTCACTCCCACCCGCCCACTGCCCTCGGCACTGGAAGAAGCACTGGGCAACCACCCCT
TCCGCACTGGGGACACAGGCAATCCAGTGGAGGACTGGGAGGCAAAGAACCACAGTGGGAAGCC
CTCCAACTCCCCTGTCCCTGAACGGAGCTTCCCACCCACCCCAAAGACATTTTGCCCAAGCCCA
CAGCCTCCACGAGGCCCTGGCGTGTCCACCATCTCCAAACCTGTCATGGTCCACCAGGAGCCCA
ATTTCATCTACAGGCCAGCTGTGAAATCTGAAGTTCTGCCACAGGAGATGTTGAAGAGGATGGT
GGTTTATCAGACAGCATTCAGACAAGATTTTCGGAAATATGAGGAAGGCTTCGACCCCTACTCC
ATGTTCACCCCAGAGCAGATCATGGGGAAGGACGTCCGGCTCCTACGCATTAAGAAGGAGAGAT
CCTTAGACCTGGCCCTGGAAGGCGGTGTGGACTCCCCCATTGGGAAGGTGGTTGTTTCTGCTGT
GTACGAGGGGGGAGCTGCTGAGCGGCACGGTGGCATTGTGAAAGGGGACGAGATCATGGCAGTC
AATGGCAAGACTGTGACAGACTACACCCTGGCGGAGGCTGAGGCTGCCCTGCAGAAGGCCTGGA
ATCAGGGTGGGGACTGGATCGACCTTGTGGTTGCCGTTTGCCCCCCAAAGGAGTATGATGATGA
GCTGACCTTCTTCTGAAGTCCAAAAGGGGAAACCAAATTCACCCCTAGAAAACAGTGAGCTCTG
GCCCCACCTCCTGAACACAAAGCCTTGAGACCAGCCTTGAGAGAGGCCACACTGCACACACCGG
ACGGCATCCCTGGGACCTGAACCTAGCACCCAGGAATCTCAAACTCCCTTTGGCCCTGAACCAG
AGTCAGATAAGGAACAGCTTGGGCCACTCTGATGAAGGCCAACATGGAGGAGAGGGAGCAGCCA
GCCGTTTGGGAGAAGATCTCAGGGATCCAGACTCTCATTCCTTTCCTCTGGCCCAGTGAATTCG
GTCTCTCCCAGCCCTGGGGGACTCCTTCCTTGAACCCTAATAACACCCCACCTGGAGTCTCTCT
CTCTCCATCCCTCTCCTCTGGCCTCTGCTCTAATTGCTGATAGGATTGTCACTGCATACCTTAC
TCTGAGCTCATTAATAAAATAAACATTTCTTTTCCAGCTTA

hide sequence

RefSeq Acc Id:

XM_008005347 ⟹ XP_008003538

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	47,428,197 - 47,477,578 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	144,848,727 - 144,898,245 (+)	NCBI

Sequence:

show sequence

GCGTCCCCAGCTCCGAGGGCGGCTGCCCGGGTCGCGGTCGCGGTTCCTTCCAGCTCCTGGCAGC
CGGGCACCCGAAGGAACCGGTCGTTCAACGACACAGCTGGACCTGGCCCAACCATGGACCGAAA
AGTGGCCCGAGAATTCCGGCATAAGGTGGATTTTCTGATTGAAAATGATGCAGAGAAGGACTAT
CTCTATGATGTGCTGCGAATGTACCACCAGACCATGGACGTGGCTGTGCTCGTGGGAGACCTGA
AGCTGGTCATCAATGAACCCAGCCGCCTGCCTCTGTTTGATGCCATTCGGCCCCTGATCCCACT
GAAGCACCAGGTGGAATATGATCAGCTGACCCCCCGGCGCTCCAGGAAGCTGAAGGAGGTGCGT
CTGGACCGTCTGCACCCCGAAGGCCTTGGCTTGAGCGTGCGTGGTGGCCTGGAGTTTGGCTGTG
GGCTCTTCATCTCCCACCTCATCAAAGGCGGTCAGGCAGACAGTGTCGGGCTCCAGGTAGGGGA
CGAGATCGTCCGGATCAATGGATATTCCATCTCCTCCTGTACCCATGAGGAGGTCATCAACCTC
ATCCGAACCAAGAAAACTGTGTCCATCAAAGTGAGACACATTGGCCTGATCCCCGTGAAGAGCT
CTCCTGATGAGCCCCTCAAGTGGCAGTATGTGGATCAGTTTGTGTCAGAATCTGGGGGGGGGCG
AGGCAGCCTGGGCTCCCCTGGAAATCGGGAAAACAAGGAGAAGAAGGTCTTCATCAGCCTGGTG
GGCTCCCGGGGCCTTGGCTGCAGCATTTCCAGCGGCCCCATCCAGAAGCCTGGCATCTTCATCA
GCCACGTGAAACCTGGCTCCCTGTCCGCTGAGGTGGGATTGGAGACAGGGGACCAGATTGTCGA
AGTGAATGGCATCGACTTCTCTAACCTGGACCACAAGGAGGCTGTGAACGTGCTGAAGAGTAGC
CGCAGCCTGACCATCTCCATCGTAGCTGGGGCTGGCCGGGAGCTGTTCATGACAGACCGGGAGC
GGCTGGCAGAGGCGCGGCAGCGTGAGCTGCAGCGGCAGGAGCTTCTCATGCAGAAGCGGCTGGC
GATGGAGTCCAACAAGATCCTCCAGGAGCAGCAGGAGATGGAGCAGCAAAGGAGAAAAGAAATT
GCCCAGAAGGCAGCAGAGGAAAATGAGAGATACCGGAAGGAGATGGAACAGATTGTGGAGGAGG
AAGAGAAGTTTAAGAAGCAATGGGAAGAAGACTGGGGCTCAAAGGAACAGCTACTCTTGCCTAA
AACCATCACTGCTGAGGTGCACCCAGTACCCCTTCGCAAGCCAAAGTATCAGGGAGTGGAGCCC
GAGCTCGAGCCCACAGATGACCCGGATGGAGGCACGGACGAGCAGGGAGAGCAGGATTTTCGGA
AATATGAGGAAGGCTTCGACCCCTACTCCATGTTCACCCCAGAGCAGATCATGGGGAAGGACGT
CCGGCTCCTACGCATTAAGAAGGAGAGATCCTTAGACCTGGCCCTGGAAGGCGGTGTGGACTCC
CCCATTGGGAAGGTGGTTGTTTCTGCTGTGTACGAGGGGGGAGCTGCTGAGCGGCACGGTGGCA
TTGTGAAAGGGGACGAGATCATGGCAGTCAATGGCAAGACTGTGACAGACTACACCCTGGCGGA
GGCTGAGGCTGCCCTGCAGAAGGCCTGGAATCAGGGTGGGGACTGGATCGACCTTGTGGTTGCC
GTTTGCCCCCCAAAGGAGTATGATGATGAGCTGACCTTCTTCTGAAGTCCAAAAGGGGAAACCA
AATTCACCCCTAGAAAACAGTGAGCTCTGGCCCCACCTCCTGAACACAAAGCCTTGAGACCAGC
CTTGAGAGAGGCCACACTGCACACACCGGACGGCATCCCTGGGACCTGAACCTAGCACCCAGGA
ATCTCAAACTCCCTTTGGCCCTGAACCAGAGTCAGATAAGGAACAGCTTGGGCCACTCTGATGA
AGGCCAACATGGAGGAGAGGGAGCAGCCAGCCGTTTGGGAGAAGATCTCAGGGATCCAGACTCT
CATTCCTTTCCTCTGGCCCAGTGAATTCGGTCTCTCCCAGCCCTGGGGGACTCCTTCCTTGAAC
CCTAATAACACCCCACCTGGAGTCTCTCTCTCTCCATCCCTCTCCTCTGGCCTCTGCTCTAATT
GCTGATAGGATTGTCACTGCATACCTTACTCTGAGCTCATTAATAAAATAAACATTTCTTTTCC
AGCTTA

hide sequence

RefSeq Acc Id:

XM_008005356 ⟹ XP_008003547

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	47,428,181 - 47,477,086 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	144,848,688 - 144,897,725 (+)	NCBI

Sequence:

show sequence

CCTCCGCGCTCAGGCCGCGTCCCCAGCTCCGAGGGCGGCTGCCCGGGTCGCGGTCGCGGTTCCT
TCCAGCTCCTGGCAGCCGGGCACCCGAAGGAACCGGTCGTTCAACGACACAGCTGGACCTGGCC
CAACCATGGACCGAAAAGTGGCCCGAGAATTCCGGCATAAGGTGGATTTTCTGATTGAAAATGA
TGCAGAGAAGGACTATCTCTATGATGTGCTGCGAATGTACCACCAGACCATGGACGTGGCTGTG
CTCGTGGGAGACCTGAAGCTGGTCATCAATGAACCCAGCCGCCTGCCTCTGTTTGATGCCATTC
GGCCCCTGATCCCACTGAAGCACCAGGTGGAATATGATCAGCTGACCCCCCGGCGCTCCAGGAA
GCTGAAGGAGGTGCGTCTGGACCGTCTGCACCCCGAAGGCCTTGGCTTGAGCGTGCGTGGTGGC
CTGGAGTTTGGCTGTGGGCTCTTCATCTCCCACCTCATCAAAGGCGGTCAGGCAGACAGTGTCG
GGCTCCAGGTAGGGGACGAGATCGTCCGGATCAATGGATATTCCATCTCCTCCTGTACCCATGA
GGAGGTCATCAACCTCATCCGAACCAAGAAAACTGTGTCCATCAAAGTGAGACACATTGGCCTG
ATCCCCGTGAAGAGCTCTCCTGATGAGCCCCTCAAGTGGCAGTATGTGGATCAGTTTGTGTCAG
AATCTGGGGGGGGGCGAGGCAGCCTGGGCTCCCCTGGAAATCGGGAAAACAAGGAGAAGAAGGT
CTTCATCAGCCTGGTGGGCTCCCGGGGCCTTGGCTGCAGCATTTCCAGCGGCCCCATCCAGAAG
CCTGGCATCTTCATCAGCCACGTGAAACCTGGCTCCCTGTCCGCTGAGGTGGGATTGGAGACAG
GGGACCAGATTGTCGAAGTGAATGGCATCGACTTCTCTAACCTGGACCACAAGGAGGCTGTGAA
CGTGCTGAAGAGTAGCCGCAGCCTGACCATCTCCATCGTAGCTGGGGCTGGCCGGGAGCTGTTC
ATGACAGACCGGGAGCGGCTGGCAGAGGCGCGGCAGCGTGAGCTGCAGCGGCAGGAGCTTCTCA
TGCAGAAGCGGCTGGCGATGGAGTCCAACAAGATCCTCCAGGAGCAGCAGGAGATGGAGCAGCA
AAGGAGAAAAGAAATTGCCCAGAAGGCAGCAGAGGAAAATGAGAGATACCGGAAGGAGATGGAA
CAGATTGTGGAGGAGGAAGAGAAGTTTAAGAAGCAATGGGAAGAAGACTGGGGCTCAAAGGAAC
AGCTACTCTTGCCTAAAACCATCACTGCTGAGGTGCACCCAGTACCCCTTCGCAAGCCAAAGTC
TTTTGGGTGGTTTTATCGTTACGATGGCAAATTCCCAACCATCCGGAAGAAAGGAAAAGATAAG
AAGAAAGCCAAGTATGACAGCCTGCAGGACTTGAGAAAGAATAAGAAAGAACTGGAGTTTGAGC
AAAAGCTTTACAAAGAGAAAGAGGAAATGCTGGAGAAAGAAAAGCAGCTAAAGATCAACCGGCT
GGCCCAGGAGGTGTCTGAGACAGAGCGGGAAGACCTTGAAGAATCGGAAAAGATTCAATATTGG
GTGGAGAGGCTCTGTCAAACGCGCCTCGAGCAGATTTCCTCTGCTGATAATGAGATTTCAGAGA
TGACCACAGGGCCCCCACCTCCTCTGCCTTCTGTGTCTCCCCTGGCCCCACCCTTGAGACGCTT
CGCAGGCGGACTGCACCTGCACACCACTGACCTGGACGACATCCCTTTGGACATGTTCTACTAT
CCCCCCAAGACTCCCTCTGCCTTGCCTGTGATGCCCCACCCTCCACCCTCCAACCCACCCCACA
AGGTCCCAGCGCCTCCTGTCCTTCCCTCATCTGGCCATGTGAGCGCCTCATCTTCCCCATGGGT
GCAGCGCACTCCACCCCCCATTCCCATCCCTCCCCCTCCATCCATTCCCACCCAAGACCTCACT
CCCACCCGCCCACTGCCCTCGGCACTGGAAGAAGCACTGGGCAACCACCCCTTCCGCACTGGGG
ACACAGGCAATCCAGTGGAGGACTGGGAGGCAAAGAACCACAGTGGGAAGCCCTCCAACTCCCC
TGTCCCTGAACGGAGCTTCCCACCCACCCCAAAGACATTTTGCCCAAGCCCACAGCCTCCACGA
GGCCCTGGCGTGTCCACCATCTCCAAACCTGTCATGGTCCACCAGGAGCCCAATTTCATCTACA
GGCCAGCTGTGAAATCTGAAGTTCTGCCACAGGAGATGTTGAAGAGGATGGTGGTTTATCAGAC
AGCATTCAGACAAGATTTTCGGAAATATGAGGAAGGCTTCGACCCCTACTCCATGTTCACCCCA
GAGCAGATCATGGGGAAGGACGTCCGGCTCCTACGCATTAAGAAGGAGAGATCCTTAGACCTGG
CCCTGGAAGGCGGTGTGGACTCCCCCATTGGGAAGGTGGTTGTTTCTGCTGTGTACGAGGGGGG
AGCTGCTGAGCGGCACGGTGGCATTGTGAAAGGGGACGAGATCATGGCAGTCAATGGCAAGACT
GTGACAGACTACACCCTGGCGGAGGCTGAGGCTGCCCTGCAGAAGGCCTGGAATCAGGGTGGGG
ACTGGATCGACCTTGTGGTTGCCGTTTGCCCCCCAAAGGAGTATGATGATGAGCTTGCTTCTCT
TCCCTCCTCCGCAGCAGAAAGCCCCCAGCCAGTCCGAAAGCTCCTTGAAGACCGTGCTGCCGTG
CACAGACACGGGTTCCTCCTGCAGCTGGAGCCCACAGTGAATAGGCAGGCGGGCCAGAGGGCCC
TGTCTGTCCCTGCTGTGTGCAGTGGCCATCTGCTGCCCACGCTGTCAGCAGGTTCTTTGGACTG
GTGTCTGGAGAGTACAGAAGGCGCCATCCCTGAAGTGCTGCCCAGGGTCTGCTATTGGCCACAG
TGGAATTCCTCAGACTCAAAACCCTCCCCTCCCTCTACAGAGCCCAGTCTGTAGTACTTGCTTG
GGACCCAGGTGTCCTGACTCATCACGGCCCTGGGACCTGCTTTGGGTCCCAAGCAGCACCCAAA
TGAGCAGGATGAAGCCTTGGGCACCATTCTCTGTGGGACACAGACAATGCCTCAAACCAGGCAT
GTGGGGCTGAAGGAACCCACAGGAAGCCTGGCTGGAATTGCCCCCAAGAGATGTCCTCAACAGA
ATGTGAAAATTCCCCTTCCTGTGAATGCCAGCCTGCTGGGAGCTCCTGCTCCACCCTGGCCCCC
ACACTTGGCCACAACCAGGGCTATTAAGAGGTTTTGAAGGCTGGTCCAAAGAACCAGGGTTGGT
GGATTAGAGTTGCTCATGTCCTGTTGTGCCCTGTCATGGCCTGAGCCGTGCTCAGAACAAACTG
TCTTCTCTGCCTTTTCCGTTCCTTGGCTGTGGGCTCTATCTGTGGGATATACCGTGGAGCCCAG
CTGTGGGATGTGTTTCTCACCCTGTGATAGGGATGTGCCCGTGGACACAGCTGGCAGGTGGCTG
TGAAACTGGTGTTTGGTGTGGCCTGAAGCCACAGATGGCAGCACCTGGGGCAGACCCAAGCCTG
GACTTGACTTTTCTGTTACAACTTTCCCAAAACATTAGGGCCTCATGCTCCCAAGACAGATGGC
CAGCTAGACCATGGCTTCTGGGGTGGCCCGCGTGGCCCTATGTTTTCTGTCACTTGCCTTTTGC
AAGGGACTGTTGCCCCTGTTCCTCCTAGTCTCCTCCTCCCCGCATCCCAGGTGTCCCTCCCACT
TTCTCCCTGGCCTCCTGTGTGCTGTGGCTGTGGCTGGTGTGTAGCCACTTGGGGCCTGCACCCA
GAGGGGTCTCCAAAGGTTGGCAGAGCCTCATACTGCCAGGGTGGGTGCTCCCCGTTGTGGGGCC
TTGGTCTGGCTGGGCTGAGTGTGCACCCACAAGGCCTGCACCCACCTGGGCTGTTTCTGCTTCC

hide sequence

RefSeq Acc Id:

XM_037999614 ⟹ XP_037855542

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	144,848,704 - 144,898,245 (+)	NCBI

RefSeq Acc Id:

XM_037999616 ⟹ XP_037855544

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	144,849,076 - 144,898,245 (+)	NCBI

RefSeq Acc Id:

XM_037999617 ⟹ XP_037855545

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	144,848,696 - 144,884,115 (+)	NCBI

RefSeq Acc Id:

XM_037999618 ⟹ XP_037855546

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	144,848,699 - 144,884,115 (+)	NCBI

RefSeq Acc Id:

XM_037999619 ⟹ XP_037855547

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	144,848,720 - 144,898,245 (+)	NCBI

RefSeq Acc Id:

XM_037999620 ⟹ XP_037855548

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	144,848,721 - 144,898,245 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008003477	(Get FASTA)	NCBI Sequence Viewer
	XP_008003492	(Get FASTA)	NCBI Sequence Viewer
	XP_008003538	(Get FASTA)	NCBI Sequence Viewer
	XP_008003547	(Get FASTA)	NCBI Sequence Viewer
	XP_037855542	(Get FASTA)	NCBI Sequence Viewer
	XP_037855544	(Get FASTA)	NCBI Sequence Viewer
	XP_037855545	(Get FASTA)	NCBI Sequence Viewer
	XP_037855546	(Get FASTA)	NCBI Sequence Viewer
	XP_037855547	(Get FASTA)	NCBI Sequence Viewer
	XP_037855548	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000001195.1

RefSeq Acc Id:	XP_008003547 ⟸ XM_008005356
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_008003492 ⟸ XM_008005301
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_008003477 ⟸ XM_008005286
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_008003538 ⟸ XM_008005347
- Peptide Label:	isoform X9
- UniProtKB:	A0A0D9QXV6 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000001195 ⟸ ENSCSAT00000002902

RefSeq Acc Id:	XP_037855545 ⟸ XM_037999617
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_037855546 ⟸ XM_037999618
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_037855542 ⟸ XM_037999614
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_037855547 ⟸ XM_037999619
- Peptide Label:	isoform X7
- UniProtKB:	A0A0D9QXV6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037855548 ⟸ XM_037999620
- Peptide Label:	isoform X8
- UniProtKB:	A0A0D9QXV6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037855544 ⟸ XM_037999616
- Peptide Label:	isoform X3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000004871	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000002902.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1160.20	UniProtKB/TrEMBL
	2.30.42.10	UniProtKB/TrEMBL
InterPro	Harmonin	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
NCBI Gene	USH1C	ENTREZGENE
PANTHER	PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED	UniProtKB/TrEMBL
	PTHR23116:SF36	UniProtKB/TrEMBL
Pfam	PDZ	UniProtKB/TrEMBL
	USH1C_N	UniProtKB/TrEMBL
PROSITE	PDZ	UniProtKB/TrEMBL
SMART	PDZ	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50156	UniProtKB/TrEMBL
UniProt	A0A0D9QXV6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations