SAXO5 (stabilizer of axonemal microtubules 5)

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Gene: SAXO5 (stabilizer of axonemal microtubules 5) Chlorocebus sabaeus

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Symbol:

SAXO5

Name:

stabilizer of axonemal microtubules 5

RGD ID:

18438548

Description:

ASSOCIATED WITH hereditary spastic paraplegia 39 (ortholog); mucolipidosis type IV (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C6H19orf45; testis expressed 45; testis-expressed protein 45; TEX45; uncharacterized protein C19orf45 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	6,992,822 - 7,004,362 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	6,995,116 - 7,004,141 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666081	864,000 - 883,654 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hereditary spastic paraplegia 39 (ISO)

mucolipidosis type IV (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

SAXO5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	6,992,822 - 7,004,362 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	6,995,116 - 7,004,141 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666081	864,000 - 883,654 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SAXO5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	7,497,548 - 7,508,450 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	7,492,976 - 7,508,450 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	7,562,434 - 7,573,336 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	7,468,485 - 7,479,336 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	7,434,951 - 7,445,845 (+)	NCBI		Celera
Cytogenetic Map	19	p13.2	NCBI
HuRef	19	7,233,805 - 7,244,691 (+)	NCBI		HuRef
CHM1_1	19	7,562,466 - 7,573,361 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	7,498,219 - 7,509,163 (+)	NCBI		T2T-CHM13v2.0

Saxo5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	3,515,966 - 3,537,183 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	3,520,862 - 3,537,181 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	3,466,713 - 3,487,183 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	3,470,862 - 3,487,181 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	3,470,862 - 3,487,178 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	3,470,862 - 3,487,181 (+)	NCBI		MGSCv36	mm8
Celera	8	3,696,734 - 3,713,152 (+)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI
cM Map	8	1.92	NCBI

Saxo5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	6,318,845 - 6,336,018 (+)	NCBI		GRCr8
mRatBN7.2	12	1,520,983 - 1,538,127 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	1,521,014 - 1,538,118 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	2,191,775 - 2,202,436 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	2,815,341 - 2,826,003 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	1,587,372 - 1,598,026 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	2,016,035 - 2,033,140 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	2,016,058 - 2,033,112 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	4,179,781 - 4,196,186 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	2,676,818 - 2,687,753 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	12	3,383,615 - 3,394,513 (+)	NCBI		Celera
Cytogenetic Map	12	p12	NCBI

Saxo5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955563	1,703,416 - 1,745,996 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955563	1,723,768 - 1,729,831 (-)	NCBI	ChiLan1.0	ChiLan1.0

SAXO5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	12,169,095 - 12,180,981 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	11,287,227 - 11,298,197 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	6,788,323 - 6,799,578 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	7,647,908 - 7,657,380 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

SAXO5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	52,297,373 - 52,304,400 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	52,101,541 - 52,108,348 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	52,826,937 - 52,833,752 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	52,810,257 - 52,845,852 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	52,030,490 - 52,037,288 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	52,474,070 - 52,480,878 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	52,705,000 - 52,711,807 (+)	NCBI		UU_Cfam_GSD_1.0

Saxo5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	213,244,891 - 213,250,408 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	4,585,951 - 4,589,865 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	4,585,737 - 4,589,892 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SAXO5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	71,625,862 - 71,631,705 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	71,625,869 - 71,632,658 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	72,108,783 - 72,127,327 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Saxo5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	620,306 - 625,233 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624828	618,820 - 625,239 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	17	33	33	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007995033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007995034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007995036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000006837 ⟹ ENSCSAP00000005036

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	6	6,995,116 - 7,004,141 (+)	Ensembl

RefSeq Acc Id:

XM_007995034 ⟹ XP_007993225

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	6,994,840 - 7,004,172 (+)	NCBI
Vero_WHO_p1.0	NW_023666081	864,000 - 883,654 (-)	NCBI

Sequence:

show sequence

CTCCTGACCTCAGGTTATCCACCCGCCTCGGTTCTCCCAAAGTGCTGGGATTACAGGCGTGAGC
CCCCGAGCCCGGCCATGAATGATTATTTCTATCTCTGCTCTTGCTGGAGGAGGGCACAGAGGCT
GTGCCAGTTTCCCGTGATGTCCCCAGCCTCCAGCTCAGTGCTTGGTGAGCAGAAAGGAGTCAAA
AGGCAGAAGTCAAAGGCAAGTGCCCCGCTGGCCACTTGCTCAGTCCCTCATCTCCACCCTCTCG
CAGGTGGCTGGTGTCCCGCGATGGCCGCAGGCGCCCTCCTGCCGTGCCCGCGCCTGTGCCCGAT
GTCCCAGCAGGACTTCCTCAAGGCCTCACACTTCTCGCTGGGGCCCGACCTGCGGCTGCACGAG
GGTACCATGCACACCACGTCGCACCGGGACTTCGCCTACCCGACGGCCACCCGGGAGCCGCCGA
GCCTGCAGCCGCCGCCCGCGCTGCTTTTCCCAACGGACCCGCGCCGGGACCGGGAAGAGCGCGT
GTCGGAGGCGCGCCGCGCGTTCCCGCCGCCGTCGACGCCGCCGTGGGAGCTGCTGCAAGCGCAG
GCGCGGGAACGCACGCTCGCCATGCAGGCCAGCAACCTGCACCTGCACGAGGACGCGCACGCCG
GGATCGGCCTCTCCAACGCGCGCGCCGCCTACGTCTGGCCCGAGCTGCCGGCGCGCGACCGAGA
GCAGATCCGCGGCGCGCGCCTCATCTTCGACCGCGACTCCCTACCGCCCGGCGACCGCCACAAG
TTGCGCATCCCGCCCACCACGCACCAGGCGCTCTTTCCACCCCACGACGCGCGCCCGCAGCCTC
GCGCGCCCAGTCGCCACCTCGGAGGCCCCAACACCCTCAAGTGGGACTACACGAGACAAGATGG
GACTTCCTACCAAAGACAGTTCCAAGCCCTGCCAGGCCCACCTGCTTTGATGTGTAAGAGGGCC
TCCTCTACAGTGGAGCTGGGAGACTGCAAGATCAGCTATGGATCGATGTGTTCGGAGCAGAAAC
AGGCCTACAGGCCCCAGGGTCTGCCTGAAGATAGGTATGACAAGGCCCAGGCCGCAGCCCACAT
CCACTATGTAAATATCCGACCTGGTGACGGCCTCTTTCACGACAGAACCACCAAGGCCGAGCAC
TTCTATGCCCGGGAGCCAGAACCTTTTGTTCTTCACCACGATCAGACTCCGGAGTCGCACATCC
TGAAAGGAAATTGGTGCCCCGGCCCCGGCAGTCTGGACACCTTCATGCAGTACTTCTACGGCCA
GCCGCCACCCGCGACACAGCCACCCAGCCGCCACGTGCCTCACGAGAAACTGCAGAGTCACGTG
ACCCTAGGGGAGCCAAAGCTACTCAGACGCTTCTTCAAGACCACCATGGGCTCTGACTACTGTC
CCTCAGAGTGGAGGCCGGTGCACAAAGCGCCCAACCTCCACTTGCAGCGGAGCAACCTGCCGCA
GGGGACCGGCGAATTCGATTTTTTAACCATGAACCAGAAGATGCTGAAGCCACACGGAACAGCT
CCGGCCCTGGTGACTGAAGAGATGCTACAGCGGTGCAAGTACAGTCACATGGAGCCCCCACTGG
GTGGACTGCGCTTCTTCTCAACCCAATACAAGGACGAATTTCCTTTCAAGTATCAGGGTCCAGC
AGCCCTGAGACTGAAAAATCCTCAGGAGGGCTTCGTGCCCCTGGGCACGCCTCACCAGCACGGC
TGCAGGGAGAAGATAGACCCTCGGGCTCCCCAGCCCCCTATGTACCCGTGCCCCAGCCAGTAAT
AAATGCCACCCTGGCAACATTCCACTCTTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_007993225	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000005036.1

RefSeq Acc Id:	XP_007993225 ⟸ XM_007995034
- UniProtKB:	A0A0D9R8U7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000005036 ⟸ ENSCSAT00000006837

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000008787	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000006837.1	UniProtKB/TrEMBL
InterPro	DUF4601	UniProtKB/TrEMBL
NCBI Gene	TEX45	ENTREZGENE
PANTHER	PTHR34828	UniProtKB/TrEMBL
	TESTIS-EXPRESSED PROTEIN 45	UniProtKB/TrEMBL
Pfam	DUF4601	UniProtKB/TrEMBL
UniProt	A0A0D9R8U7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-05-02	SAXO5	stabilizer of axonemal microtubules 5	TEX45	testis expressed 45	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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