RPL37 (ribosomal protein L37) - Rat Genome Database

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Gene: RPL37 (ribosomal protein L37) Chlorocebus sabaeus
Analyze
Symbol: RPL37
Name: ribosomal protein L37
RGD ID: 18435613
Description: ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog); synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L37
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1439,588,268 - 39,590,786 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607130,013,316 - 30,015,878 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RPL37
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1439,588,268 - 39,590,786 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607130,013,316 - 30,015,878 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
RPL37
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38540,825,262 - 40,835,222 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl540,825,262 - 40,835,222 (-)EnsemblGRCh38hg38GRCh38
GRCh37540,825,364 - 40,835,324 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36540,867,187 - 40,871,144 (-)NCBINCBI36Build 36hg18NCBI36
Build 34540,861,119 - 40,871,144NCBI
Celera540,720,028 - 40,723,995 (-)NCBICelera
Cytogenetic Map5p13.1NCBI
HuRef540,783,034 - 40,786,991 (-)NCBIHuRef
CHM1_1540,833,530 - 40,837,487 (-)NCBICHM1_1
T2T-CHM13v2.0541,081,680 - 41,091,646 (-)NCBIT2T-CHM13v2.0
Rpl37
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39155,146,127 - 5,148,626 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl155,146,127 - 5,148,622 (+)EnsemblGRCm39 Ensembl
GRCm38155,116,613 - 5,119,140 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl155,116,645 - 5,119,140 (+)EnsemblGRCm38mm10GRCm38
MGSCv37155,066,613 - 5,069,140 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36155,063,860 - 5,066,355 (+)NCBIMGSCv36mm8
Celera154,966,731 - 4,969,258 (+)NCBICelera
Cytogenetic Map15A1NCBI
cM Map151.99NCBI
Rpl37-ps5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8971,911,342 - 71,911,714 (+)NCBIGRCr8
mRatBN7.2964,417,475 - 64,417,847 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl964,417,487 - 64,417,814 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0969,790,829 - 69,791,199 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1064,336,200 - 64,336,546 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl969,790,831 - 69,791,196 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0969,600,107 - 69,600,473 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4961,668,917 - 61,669,292 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera961,836,347 - 61,836,717 (+)NCBICelera
Cytogenetic Map9q32NCBI
Rpl37
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542625,120,024 - 25,122,559 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542625,120,024 - 25,122,559 (-)NCBIChiLan1.0ChiLan1.0
RPL37
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2469,502,277 - 69,506,190 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1567,656,935 - 67,659,822 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0569,551,852 - 69,554,735 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1574,592,834 - 74,595,713 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl574,592,834 - 74,595,713 (+)Ensemblpanpan1.1panPan2
RPL37
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11239,026,975 - 39,027,322 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1239,026,975 - 39,027,322 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha468,231,963 - 68,234,526 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0469,062,016 - 69,064,582 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl469,061,911 - 69,064,586 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1468,821,313 - 68,823,872 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0468,934,330 - 68,936,917 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0469,473,412 - 69,475,977 (+)NCBIUU_Cfam_GSD_1.0
Rpl37
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213229,586,152 - 229,588,350 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365181,783,559 - 1,785,681 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPL37
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1625,797,120 - 25,803,526 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11625,800,883 - 25,803,526 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Rpl37
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475914,117,271 - 14,119,692 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475914,117,158 - 14,119,692 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007961470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_007961470   ⟹   XP_007959661
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1439,588,268 - 39,590,786 (-)NCBI
Vero_WHO_p1.0NW_02366607130,013,316 - 30,015,878 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007959661 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000017506.1
Reference Protein Sequences
RefSeq Acc Id: XP_007959661   ⟸   XM_007961470
- UniProtKB: A0A0D9S9G7 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000000498 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000018037.1 UniProtKB/TrEMBL
Gene3D-CATH 2.20.25.30 UniProtKB/TrEMBL
InterPro Ribosomal_L37ae/L37e UniProtKB/TrEMBL
  Ribosomal_L37e UniProtKB/TrEMBL
  Ribosomal_L37e_CS UniProtKB/TrEMBL
  Ribosomal_zn-bd UniProtKB/TrEMBL
KEGG Report csab:103215178 UniProtKB/TrEMBL
  csab:103244604 UniProtKB/TrEMBL
NCBI Gene RPL37 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L37 UniProtKB/TrEMBL
  60S RIBOSOMAL PROTEIN L37 UniProtKB/TrEMBL
Pfam Ribosomal_L37e UniProtKB/TrEMBL
PROSITE RIBOSOMAL_L37E UniProtKB/TrEMBL
Superfamily-SCOP SSF57829 UniProtKB/TrEMBL
UniProt A0A0D9S9G7 ENTREZGENE, UniProtKB/TrEMBL