KCNAB3 (potassium voltage-gated channel subfamily A regulatory beta subunit 3) - Rat Genome Database

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Gene: KCNAB3 (potassium voltage-gated channel subfamily A regulatory beta subunit 3) Chlorocebus sabaeus
Analyze
Symbol: KCNAB3
Name: potassium voltage-gated channel subfamily A regulatory beta subunit 3
RGD ID: 18424500
Description: ASSOCIATED WITH common variable immunodeficiency (ortholog); Diamond-Blackfan anemia (ortholog); dyskeratosis congenita (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: voltage-gated potassium channel subunit beta-3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,309,965 - 7,318,531 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605914,089,375 - 14,098,175 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KCNAB3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,309,965 - 7,318,531 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605914,089,375 - 14,098,175 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
KCNAB3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,921,859 - 7,929,856 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,921,859 - 7,929,856 (-)EnsemblGRCh38hg38GRCh38
GRCh37177,825,177 - 7,833,174 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,766,752 - 7,773,478 (-)NCBINCBI36Build 36hg18NCBI36
Build 34177,766,751 - 7,773,478NCBI
Celera177,853,593 - 7,860,422 (-)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef177,719,774 - 7,727,351 (-)NCBIHuRef
CHM1_1177,833,965 - 7,841,541 (-)NCBICHM1_1
T2T-CHM13v2.0177,827,287 - 7,835,284 (-)NCBIT2T-CHM13v2.0
Kcnab3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,217,084 - 69,223,867 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,217,084 - 69,223,868 (+)EnsemblGRCm39 Ensembl
GRCm381169,326,258 - 69,333,041 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,326,258 - 69,333,042 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,139,760 - 69,146,543 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361169,142,453 - 69,149,236 (+)NCBIMGSCv36mm8
Celera1176,280,241 - 76,287,020 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.51NCBI
Kcnab3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81054,546,638 - 54,555,209 (+)NCBIGRCr8
mRatBN7.21054,047,830 - 54,056,401 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1054,047,825 - 54,054,174 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1058,709,508 - 58,715,856 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01058,198,122 - 58,204,470 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01053,706,267 - 53,712,613 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01055,927,228 - 55,933,653 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1055,927,223 - 55,933,653 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01055,669,258 - 55,676,107 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,119,461 - 56,126,544 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11056,133,083 - 56,140,167 (+)NCBI
Celera1053,204,399 - 53,210,732 (+)NCBICelera
Cytogenetic Map10q24NCBI
Kcnab3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,013,279 - 9,020,716 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,013,279 - 9,020,716 (+)NCBIChiLan1.0ChiLan1.0
KCNAB3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21915,520,032 - 15,528,394 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11717,486,046 - 17,494,401 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0177,956,961 - 7,965,450 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1177,943,403 - 7,951,479 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,943,403 - 7,951,477 (-)Ensemblpanpan1.1panPan2
KCNAB3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,777,435 - 32,783,619 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl532,777,791 - 32,783,611 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,914,291 - 32,920,458 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0532,880,131 - 32,886,296 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl532,879,521 - 32,885,863 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1532,847,821 - 32,853,991 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0532,803,852 - 32,810,023 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0532,982,993 - 32,989,161 (-)NCBIUU_Cfam_GSD_1.0
Kcnab3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,690,421 - 47,698,269 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365951,162,438 - 1,172,016 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365951,164,609 - 1,172,964 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNAB3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,171,319 - 53,180,823 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,171,315 - 53,178,924 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21255,537,670 - 55,543,027 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Kcnab3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478610,504,147 - 10,511,695 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478610,504,135 - 10,512,383 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008010230   ⟹   XP_008008421
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1167,309,965 - 7,318,531 (-)NCBI
Vero_WHO_p1.0NW_02366605914,089,375 - 14,098,175 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008010231   ⟹   XP_008008422
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1167,309,965 - 7,318,531 (-)NCBI
Vero_WHO_p1.0NW_02366605914,089,375 - 14,098,175 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008008421 (Get FASTA)   NCBI Sequence Viewer  
  XP_008008422 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008008422   ⟸   XM_008010231
- Peptide Label: isoform X2
RefSeq Acc Id: XP_008008421   ⟸   XM_008010230
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene KCNAB3 ENTREZGENE