PRELP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 25 | 25,854,443 - 25,867,179 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 25,851,674 - 25,867,177 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 26,627,734 - 26,642,894 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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PRELP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 203,475,806 - 203,491,352 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 203,475,806 - 203,491,352 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 203,444,934 - 203,460,480 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 201,711,506 - 201,727,103 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 200,176,539 - 200,192,134 | NCBI | | | | | Celera | 1 | 176,574,517 - 176,590,114 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32.1 | NCBI | | | | | HuRef | 1 | 174,609,796 - 174,625,529 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 204,867,696 - 204,883,317 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 202,738,636 - 202,754,205 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Prelp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 133,838,042 - 133,857,820 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 133,838,042 - 133,849,152 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 133,910,304 - 133,930,102 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 133,910,304 - 133,921,414 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 135,806,881 - 135,817,978 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 135,726,689 - 135,737,788 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 136,525,698 - 136,536,797 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | E4 | NCBI | | | | | cM Map | 1 | 58.02 | NCBI | | | | |
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Prelp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 13 | 47,920,480 - 47,943,547 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 13 | 45,368,407 - 45,391,480 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 45,370,533 - 45,380,270 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 13 | 47,979,705 - 47,988,845 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 49,267,749 - 49,276,889 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 46,532,376 - 46,541,463 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 13 | 50,749,526 - 50,773,934 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 50,749,514 - 50,761,355 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 55,802,758 - 55,827,390 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 13 | 46,863,392 - 46,874,172 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 13 | 46,877,436 - 46,888,215 (-) | NCBI | | | | | Celera | 13 | 45,699,857 - 45,709,383 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | q13 | NCBI | | | | |
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Prelp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955406 | 39,429,690 - 39,443,299 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955406 | 39,429,845 - 39,442,577 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PRELP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 45,889,452 - 45,901,902 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 45,854,053 - 45,868,942 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 179,077,892 - 179,092,796 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 183,372,022 - 183,386,626 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 183,372,028 - 183,386,619 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PRELP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 38 | 198,681 - 212,320 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 38 | 198,583 - 209,937 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 38 | 294,916 - 308,561 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 38 | 195,264 - 208,935 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 38 | 195,237 - 208,922 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 38 | 187,599 - 201,248 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 38 | 581,675 - 595,334 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 38 | 795,591 - 809,246 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Prelp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 71,920,731 - 71,934,667 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936567 | 1,155,292 - 1,169,467 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936567 | 1,155,348 - 1,169,276 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PRELP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 64,190,982 - 64,207,001 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 64,190,978 - 64,207,008 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 70,484,576 - 70,500,618 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Prelp (Heterocephalus glaber - naked mole-rat) |
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