MAGEA1 (MAGE family member A1) - Rat Genome Database

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Gene: MAGEA1 (MAGE family member A1) Chlorocebus sabaeus
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Symbol: MAGEA1
Name: MAGE family member A1
RGD ID: 18409138
Description: ENCODES a protein that exhibits histone deacetylase binding (inferred); INVOLVED IN negative regulation of Notch signaling pathway (inferred); negative regulation of transcription by RNA polymerase II (inferred); ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: melanoma-associated antigen 1
RGD Orthologs
Human
Mouse
Bonobo
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X127,660,892 - 127,662,685 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX127,661,484 - 127,662,410 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606565,519,332 - 65,524,510 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
MAGEA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X127,660,892 - 127,662,685 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX127,661,484 - 127,662,410 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606565,519,332 - 65,524,510 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
MAGEA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X153,179,284 - 153,183,880 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX153,179,284 - 153,183,880 (+)EnsemblGRCh38hg38GRCh38
GRCh37X152,481,520 - 152,486,116 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X152,134,716 - 152,139,310 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X151,965,722 - 151,970,284NCBI
CeleraX152,677,805 - 152,682,399 (+)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX141,141,339 - 141,145,814 (-)NCBIHuRef
CHM1_1X152,355,955 - 152,360,549 (-)NCBICHM1_1
T2T-CHM13v2.0X151,483,624 - 151,488,220 (-)NCBIT2T-CHM13v2.0
Magea5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X153,836,057 - 153,846,147 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX153,836,057 - 153,846,141 (-)EnsemblGRCm39 Ensembl
GRCm38X155,053,061 - 155,063,151 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX155,053,061 - 155,063,145 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X151,487,604 - 151,496,096 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X150,393,777 - 150,402,269 (-)NCBIMGSCv36mm8
CeleraX138,372,642 - 138,381,134 (-)NCBICelera
Cytogenetic MapXF3NCBI
cM MapX72.38NCBI
MAGEA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X153,220,909 - 153,222,404 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X153,224,513 - 153,226,008 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X142,727,982 - 142,732,563 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X152,659,446 - 152,664,023 (-)NCBIpanpan1.1PanPan1.1panPan2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
16 16 17 30 30 3 3

Sequence


Ensembl Acc Id: ENSCSAT00000018011   ⟹   ENSCSAP00000017480
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 EnsemblX127,661,484 - 127,662,410 (-)Ensembl
RefSeq Acc Id: XM_037988885   ⟹   XP_037844813
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606565,519,332 - 65,523,913 (-)NCBI
RefSeq Acc Id: XM_037988886   ⟹   XP_037844814
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606565,519,743 - 65,524,510 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037844813 (Get FASTA)   NCBI Sequence Viewer  
  XP_037844814 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000017480.1
Ensembl Acc Id: ENSCSAP00000017480   ⟸   ENSCSAT00000018011
RefSeq Acc Id: XP_037844813   ⟸   XM_037988885
- UniProtKB: A0A0D9S9E1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037844814   ⟸   XM_037988886
- UniProtKB: A0A0D9S9E1 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000000524 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000018011.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.1200 UniProtKB/TrEMBL
  1.10.10.1210 UniProtKB/TrEMBL
InterPro MAGE UniProtKB/TrEMBL
  MAGE_N UniProtKB/TrEMBL
  MAGE_WH1 UniProtKB/TrEMBL
  MAGE_WH2 UniProtKB/TrEMBL
  MHD_dom UniProtKB/TrEMBL
NCBI Gene MAGEA1 ENTREZGENE
PANTHER PTHR11736 UniProtKB/TrEMBL
  PTHR11736:SF49 UniProtKB/TrEMBL
Pfam MAGE UniProtKB/TrEMBL
  MAGE_N UniProtKB/TrEMBL
PROSITE MAGE UniProtKB/TrEMBL
SMART MAGE UniProtKB/TrEMBL
  MAGE_N UniProtKB/TrEMBL
UniProt A0A0D9S9E1 ENTREZGENE, UniProtKB/TrEMBL