EXOC4 (exocyst complex component 4) - Rat Genome Database

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Gene: EXOC4 (exocyst complex component 4) Chlorocebus sabaeus
Analyze
Symbol: EXOC4
Name: exocyst complex component 4
RGD ID: 18406056
Description: ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); establishment of cell polarity (ortholog); Golgi to transport vesicle transport (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Meckel syndrome (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN cell leading edge (ortholog); centrosome (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121101,885,192 - 102,694,892 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666042666,279 - 1,487,617 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
EXOC4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121101,885,192 - 102,694,892 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666042666,279 - 1,487,617 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
EXOC4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387133,253,078 - 134,100,951 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7133,253,073 - 134,066,589 (+)EnsemblGRCh38hg38GRCh38
GRCh377132,937,834 - 133,750,514 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367132,588,363 - 133,401,054 (+)NCBINCBI36Build 36hg18NCBI36
Build 347132,395,083 - 133,207,766NCBI
Celera7127,689,360 - 128,501,714 (+)NCBICelera
Cytogenetic Map7q33NCBI
HuRef7127,253,094 - 128,065,500 (+)NCBIHuRef
CHM1_17132,872,749 - 133,685,075 (+)NCBICHM1_1
T2T-CHM13v2.07134,574,528 - 135,422,862 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27132,277,237 - 133,089,663 (+)NCBI
Exoc4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39633,226,025 - 33,950,914 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl633,226,020 - 33,950,914 (+)EnsemblGRCm39 Ensembl
GRCm38633,249,090 - 33,973,979 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl633,249,085 - 33,973,979 (+)EnsemblGRCm38mm10GRCm38
MGSCv37633,199,150 - 33,922,943 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36633,179,308 - 33,903,101 (+)NCBIMGSCv36mm8
Celera633,234,875 - 33,967,226 (+)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map614.59NCBI
Exoc4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8462,774,896 - 63,551,541 (+)NCBIGRCr8
mRatBN7.2461,807,706 - 62,584,316 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl461,807,761 - 62,585,723 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx466,761,366 - 67,530,050 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0462,677,087 - 63,445,752 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0461,079,497 - 61,848,170 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0460,549,128 - 61,358,305 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl460,549,197 - 61,355,994 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0460,287,465 - 60,839,820 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0460,913,238 - 61,081,401 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4460,406,942 - 61,284,294 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1460,683,071 - 61,559,840 (+)NCBI
Celera456,882,713 - 57,637,636 (+)NCBICelera
Cytogenetic Map4q22NCBI
Exoc4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541033,935,320 - 34,673,764 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541033,937,825 - 34,672,790 (-)NCBIChiLan1.0ChiLan1.0
EXOC4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26170,083,599 - 170,888,092 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1722,093,854 - 22,898,347 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07125,226,107 - 126,030,486 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17137,734,349 - 138,537,446 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7137,734,400 - 138,536,214 (+)Ensemblpanpan1.1panPan2
EXOC4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1143,334,286 - 4,077,478 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl143,334,220 - 4,077,411 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha142,990,436 - 3,736,256 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0143,063,572 - 3,812,726 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl143,063,572 - 3,812,695 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1143,267,885 - 4,015,200 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0143,012,296 - 3,761,501 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0143,158,194 - 3,902,305 (-)NCBIUU_Cfam_GSD_1.0
EXOC4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1815,105,138 - 15,906,707 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11815,105,152 - 15,906,734 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21816,661,831 - 16,935,462 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Exoc4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247832,316,300 - 3,165,255 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247832,315,128 - 3,165,343 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_007982965   ⟹   XP_007981156
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.121101,885,192 - 102,694,892 (+)NCBI
Vero_WHO_p1.0NW_023666042666,279 - 1,487,617 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007981156 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_007981156   ⟸   XM_007982965


Additional Information

Database Acc Id Source(s)
NCBI Gene EXOC4 ENTREZGENE