FIG4 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 13 | 64,054,000 - 64,186,800 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 13 | 64,054,002 - 64,186,714 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 36,346,233 - 36,489,346 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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FIG4 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 109,691,296 - 109,825,426 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 109,690,609 - 109,878,098 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 110,012,499 - 110,146,629 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 110,119,161 - 110,253,327 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 110,119,160 - 110,253,327 | NCBI | | | | | Celera | 6 | 110,759,045 - 110,893,292 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q21 | NCBI | | | | | HuRef | 6 | 107,578,606 - 107,713,071 (+) | NCBI | | HuRef | | | CHM1_1 | 6 | 110,275,404 - 110,409,874 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 110,869,350 - 111,003,788 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Fig4 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 41,064,168 - 41,179,237 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 41,064,168 - 41,179,256 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 41,188,172 - 41,303,241 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 41,188,172 - 41,303,260 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 40,907,978 - 41,023,047 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 40,876,587 - 40,991,656 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 42,083,412 - 42,197,996 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | B1 | NCBI | | | | | cM Map | 10 | 22.08 | NCBI | | | | |
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Fig4 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 20 | 46,183,225 - 46,306,686 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 44,600,603 - 44,724,047 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 44,600,603 - 44,723,844 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 46,388,086 - 46,511,436 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 46,047,227 - 46,170,581 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 46,772,600 - 46,893,206 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 45,922,806 - 46,044,754 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 45,922,806 - 46,044,738 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 47,625,556 - 47,747,494 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 45,123,352 - 45,248,795 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 20 | 45,146,775 - 45,222,780 (-) | NCBI | | | | | Celera | 20 | 45,399,685 - 45,522,856 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q12 | NCBI | | | | |
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Fig4 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955411 | 3,135,752 - 3,217,891 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
FIG4 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 5 | 129,701,209 - 129,836,807 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 127,589,237 - 127,723,686 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 107,495,637 - 107,631,201 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 111,539,937 - 111,673,894 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 111,539,937 - 111,673,894 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
FIG4 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 12 | 66,508,801 - 66,632,830 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 66,509,431 - 66,632,822 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 66,329,148 - 66,452,527 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 67,393,792 - 67,518,028 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 67,394,350 - 67,518,026 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 66,742,283 - 66,865,882 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 66,591,834 - 66,714,914 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 66,863,026 - 66,986,428 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Fig4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 101,462,042 - 101,567,353 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936564 | 5,736,873 - 5,842,722 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936564 | 5,736,908 - 5,842,210 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
FIG4 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 75,694,151 - 75,847,528 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 75,694,151 - 75,847,021 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 85,452,466 - 85,539,950 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | | Sscrofa10.2 | 1 | 84,995,954 - 85,027,999 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Fig4 (Heterocephalus glaber - naked mole-rat) |
|