YAE1 (YAE1 maturation factor of ABCE1) - Rat Genome Database

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Gene: YAE1 (YAE1 maturation factor of ABCE1) Chlorocebus sabaeus
Analyze
Symbol: YAE1
Name: YAE1 maturation factor of ABCE1
RGD ID: 18398648
Description: INVOLVED IN protein maturation by [4Fe-4S] cluster transfer (ortholog); ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Yae1 domain containing 1; YAE1, ABCE1 maturation factor; YAE1D1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12118,922,990 - 18,969,620 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660623,423,470 - 3,470,817 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
YAE1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12118,922,990 - 18,969,620 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660623,423,470 - 3,470,817 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
YAE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38739,566,404 - 39,612,089 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl739,566,385 - 39,610,320 (+)EnsemblGRCh38hg38GRCh38
GRCh37739,606,003 - 39,651,688 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36739,572,534 - 39,578,996 (+)NCBINCBI36Build 36hg18NCBI36
Build 34739,379,248 - 39,385,722NCBI
Celera739,593,539 - 39,600,016 (+)NCBICelera
Cytogenetic Map7p14.1NCBI
HuRef739,490,080 - 39,496,557 (+)NCBIHuRef
CHM1_1739,608,630 - 39,615,107 (+)NCBICHM1_1
T2T-CHM13v2.0739,723,945 - 39,769,644 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2739,643,891 - 39,650,368 (+)NCBI
Yae1d1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391318,161,225 - 18,167,936 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1318,155,915 - 18,167,934 (-)EnsemblGRCm39 Ensembl
GRCm381317,986,640 - 17,993,351 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1317,981,330 - 17,993,349 (-)EnsemblGRCm38mm10GRCm38
MGSCv371318,078,474 - 18,085,185 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361317,773,343 - 17,778,479 (-)NCBIMGSCv36mm8
Celera1318,291,882 - 18,298,593 (-)NCBICelera
Cytogenetic Map13A2NCBI
cM Map136.05NCBI
Yae1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81751,722,582 - 51,729,098 (+)NCBIGRCr8
mRatBN7.21747,027,033 - 47,033,549 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1747,027,019 - 47,033,546 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1750,216,874 - 50,223,386 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01754,219,797 - 54,226,309 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01748,322,446 - 48,328,962 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01749,610,548 - 49,617,065 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1749,610,548 - 49,617,065 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01747,667,539 - 47,674,056 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41754,911,892 - 54,918,408 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11754,914,739 - 54,918,754 (+)NCBI
Celera1743,112,755 - 43,119,271 (+)NCBICelera
Cytogenetic Map17q11NCBI
Yae1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554603,897,913 - 3,904,544 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554603,900,245 - 3,904,430 (-)NCBIChiLan1.0ChiLan1.0
YAE1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2648,822,313 - 48,868,088 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1797,147,058 - 97,192,828 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0744,623,036 - 44,668,803 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
YAE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11810,121,518 - 10,140,963 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1810,135,810 - 10,140,949 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha189,969,769 - 9,989,265 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01810,170,108 - 10,189,597 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1810,184,751 - 10,189,544 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11810,147,097 - 10,166,576 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01810,122,920 - 10,142,405 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01810,231,897 - 10,251,391 (-)NCBIUU_Cfam_GSD_1.0
Yae1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511895,863,219 - 95,872,267 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647815,074,922 - 15,078,932 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647815,074,956 - 15,079,089 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
YAE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1854,658,701 - 54,663,198 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11854,656,517 - 54,663,207 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21859,923,306 - 59,938,031 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Yae1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474021,390,701 - 21,395,956 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474021,390,940 - 21,395,408 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007981552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_007981552   ⟹   XP_007979743
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12118,922,990 - 18,969,620 (-)NCBI
Vero_WHO_p1.0NW_0236660623,423,470 - 3,470,817 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007979743 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_007979743   ⟸   XM_007981552


Additional Information

Database Acc Id Source(s)
NCBI Gene YAE1 ENTREZGENE