HAUS5 (HAUS augmin like complex subunit 5) - Rat Genome Database

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Gene: HAUS5 (HAUS augmin like complex subunit 5) Chlorocebus sabaeus
Analyze
Symbol: HAUS5
Name: HAUS augmin like complex subunit 5
RGD ID: 18393544
Description: INVOLVED IN centrosome cycle (inferred); spindle assembly (inferred); ASSOCIATED WITH Brugada syndrome 5 (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN HAUS complex (ortholog); mitotic spindle microtubule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: HAUS augmin-like complex subunit 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,524,704 - 30,534,968 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,524,757 - 30,537,194 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660738,320,166 - 8,330,418 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
HAUS5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,524,704 - 30,534,968 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,524,757 - 30,537,194 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660738,320,166 - 8,330,418 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
HAUS5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,612,735 - 35,625,355 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,612,735 - 35,625,355 (+)EnsemblGRCh38hg38GRCh38
GRCh371936,103,637 - 36,116,257 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,795,486 - 40,808,091 (+)NCBINCBI36Build 36hg18NCBI36
Celera1932,817,103 - 32,829,715 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,608,968 - 32,621,517 (+)NCBIHuRef
CHM1_11936,105,179 - 36,117,783 (+)NCBICHM1_1
T2T-CHM13v2.01938,157,682 - 38,170,309 (+)NCBIT2T-CHM13v2.0
Haus5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,353,133 - 30,364,419 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,353,136 - 30,364,419 (-)EnsemblGRCm39 Ensembl
GRCm38730,653,708 - 30,664,994 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,653,711 - 30,664,994 (-)EnsemblGRCm38mm10GRCm38
MGSCv37731,438,727 - 31,450,013 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36730,362,464 - 30,373,754 (-)NCBIMGSCv36mm8
Celera725,245,314 - 25,256,597 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map718.95NCBI
Haus5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8195,039,800 - 95,050,778 (-)NCBIGRCr8
mRatBN7.2185,912,371 - 85,924,327 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,912,374 - 85,923,337 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0189,113,045 - 89,124,971 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,109,750 - 89,124,132 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0190,268,667 - 90,279,606 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4185,706,504 - 85,717,622 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera180,284,082 - 80,295,976 (-)NCBICelera
Cytogenetic Map1q21NCBI
Haus5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554684,830,852 - 4,839,416 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554684,830,414 - 4,844,458 (+)NCBIChiLan1.0ChiLan1.0
HAUS5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22041,609,355 - 41,620,182 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11943,592,806 - 43,604,110 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01932,542,957 - 32,554,284 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11941,241,370 - 41,290,718 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1941,241,367 - 41,290,718 (+)Ensemblpanpan1.1panPan2
HAUS5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11116,990,549 - 117,001,275 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1116,991,803 - 117,001,508 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1116,395,772 - 116,406,267 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01117,593,792 - 117,604,525 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1117,593,797 - 117,604,746 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11117,157,877 - 117,167,370 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01116,780,675 - 116,791,428 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01117,836,607 - 117,847,350 (-)NCBIUU_Cfam_GSD_1.0
LOC101969127
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934910,942,455 - 10,951,759 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936570693,379 - 703,256 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936570694,132 - 703,299 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HAUS5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl645,057,837 - 45,071,611 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1645,057,801 - 45,071,604 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,514,448 - 40,526,979 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Haus5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247948,007,364 - 8,016,783 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247948,007,281 - 8,016,373 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 4 4
Low 32 20 56
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000002462   ⟹   ENSCSAP00000000768
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl630,524,757 - 30,537,194 (+)Ensembl
RefSeq Acc Id: XM_007996380   ⟹   XP_007994571
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1630,524,704 - 30,534,968 (+)NCBI
Vero_WHO_p1.0NW_0236660738,320,166 - 8,330,418 (+)NCBI
Sequence:
RefSeq Acc Id: XM_037991547   ⟹   XP_037847475
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660738,320,336 - 8,330,418 (+)NCBI
Protein Sequences
Protein RefSeqs XP_007994571 (Get FASTA)   NCBI Sequence Viewer  
  XP_037847475 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000000768.1
Reference Protein Sequences
RefSeq Acc Id: XP_007994571   ⟸   XM_007996380
- Peptide Label: isoform X1
- UniProtKB: A0A0D9QWM9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000000768   ⟸   ENSCSAT00000002462
RefSeq Acc Id: XP_037847475   ⟸   XM_037991547
- Peptide Label: isoform X2
- UniProtKB: A0A0D9QWM9 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000004431 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000002462.1 UniProtKB/TrEMBL
InterPro HAUS5 UniProtKB/TrEMBL
  HAUS5_metazoa UniProtKB/TrEMBL
KEGG Report csab:103234522 UniProtKB/TrEMBL
NCBI Gene HAUS5 ENTREZGENE
PANTHER HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5 UniProtKB/TrEMBL
  HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5 UniProtKB/TrEMBL
Pfam HAUS5 UniProtKB/TrEMBL
PRINTS HAUSAUGMINL5 UniProtKB/TrEMBL
UniProt A0A0D9QWM9 ENTREZGENE, UniProtKB/TrEMBL