CEP152 (centrosomal protein 152) - Rat Genome Database

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Gene: CEP152 (centrosomal protein 152) Chlorocebus sabaeus
Analyze
Symbol: CEP152
Name: centrosomal protein 152
RGD ID: 18393366
Description: ENCODES a protein that exhibits protein kinase binding (inferred); INVOLVED IN centriole replication (inferred); centrosome duplication (inferred); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN procentriole replication complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: centrosomal protein of 152 kDa
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12634,473,648 - 34,608,650 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2634,473,757 - 34,546,842 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,676 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CEP152
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12634,473,648 - 34,608,650 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2634,473,757 - 34,546,842 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,676 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CEP152
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381548,729,083 - 48,811,069 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1548,712,928 - 48,811,146 (-)EnsemblGRCh38hg38GRCh38
GRCh371549,030,135 - 49,103,266 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361546,817,640 - 46,890,476 (-)NCBINCBI36Build 36hg18NCBI36
Celera1525,923,760 - 25,996,973 (-)NCBICelera
Cytogenetic Map15q21.1NCBI
HuRef1525,862,141 - 25,935,353 (-)NCBIHuRef
CHM1_11549,148,135 - 49,221,365 (-)NCBICHM1_1
T2T-CHM13v2.01546,536,038 - 46,619,269 (-)NCBIT2T-CHM13v2.0
Cep152
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392125,391,784 - 125,467,081 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2125,405,008 - 125,467,033 (-)EnsemblGRCm39 Ensembl
GRCm382125,549,864 - 125,625,174 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2125,563,088 - 125,625,113 (-)EnsemblGRCm38mm10GRCm38
MGSCv372125,388,824 - 125,450,849 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362125,254,529 - 125,316,554 (-)NCBIMGSCv36mm8
Celera2126,806,562 - 126,871,129 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map261.76NCBI
Cep152
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83133,243,979 - 133,332,271 (-)NCBIGRCr8
mRatBN7.23112,803,185 - 112,878,298 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3112,793,983 - 112,804,069 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl3112,810,425 - 112,878,458 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.03117,822,799 - 117,894,856 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3117,811,504 - 117,819,053 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.03124,347,590 - 124,418,896 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43112,864,055 - 112,929,038 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13112,769,932 - 112,845,608 (-)NCBI
Celera3111,640,652 - 111,735,028 (-)NCBICelera
Cytogenetic Map3q36NCBI
Cep152
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554095,122,325 - 5,210,733 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554095,121,332 - 5,210,729 (+)NCBIChiLan1.0ChiLan1.0
CEP152
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21637,979,566 - 38,052,470 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11542,161,101 - 42,236,378 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01527,665,278 - 27,760,808 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11546,011,447 - 46,084,233 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1546,011,447 - 46,084,233 (-)Ensemblpanpan1.1panPan2
CEP152
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13014,958,537 - 15,047,431 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3014,958,853 - 15,041,835 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3014,880,041 - 14,969,017 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03015,092,265 - 15,181,248 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3015,092,667 - 15,181,209 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13015,015,605 - 15,104,589 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03015,136,420 - 15,225,515 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03015,243,144 - 15,332,133 (-)NCBIUU_Cfam_GSD_1.0
Cep152
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864093,205,044 - 93,285,442 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647111,052,720 - 11,117,327 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647111,052,994 - 11,133,385 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP152
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1122,876,141 - 122,979,845 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11122,876,146 - 122,979,851 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21136,700,802 - 136,818,062 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Cep152
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473110,900,371 - 10,990,415 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473110,899,654 - 10,990,143 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium
Low 36 20 60
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008016686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008016687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008016688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008016689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008016690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008016691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038009961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038009962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038009963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038009964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038009965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005244317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005244318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005244319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_502011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCSAT00000008630   ⟹   ENSCSAP00000006773
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2634,473,757 - 34,546,842 (+)Ensembl
RefSeq Acc Id: XM_008016686   ⟹   XP_008014877
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12634,473,653 - 34,546,845 (+)NCBI
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,667 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008016687   ⟹   XP_008014878
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12634,473,653 - 34,546,845 (+)NCBI
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,676 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008016689   ⟹   XP_008014880
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12634,473,684 - 34,546,845 (+)NCBI
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,667 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038009961   ⟹   XP_037865889
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,471 (-)NCBI
RefSeq Acc Id: XM_038009962   ⟹   XP_037865890
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,471 (-)NCBI
RefSeq Acc Id: XM_038009963   ⟹   XP_037865891
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,470 (-)NCBI
RefSeq Acc Id: XM_038009964   ⟹   XP_037865892
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,470 (-)NCBI
RefSeq Acc Id: XM_038009965   ⟹   XP_037865893
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,582,665 - 106,654,470 (-)NCBI
RefSeq Acc Id: XR_005244317
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,582,803 - 106,654,470 (-)NCBI
RefSeq Acc Id: XR_005244318
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,582,803 - 106,654,468 (-)NCBI
RefSeq Acc Id: XR_005244319
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666048106,582,803 - 106,654,551 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_008014877   ⟸   XM_008016686
- Peptide Label: isoform X3
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008014878   ⟸   XM_008016687
- Peptide Label: isoform X3
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008014880   ⟸   XM_008016689
- Peptide Label: isoform X6
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000006773   ⟸   ENSCSAT00000008630
RefSeq Acc Id: XP_037865890   ⟸   XM_038009962
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037865889   ⟸   XM_038009961
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037865892   ⟸   XM_038009964
- Peptide Label: isoform X5
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037865891   ⟸   XM_038009963
- Peptide Label: isoform X4
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037865893   ⟸   XM_038009965
- Peptide Label: isoform X7
- UniProtKB: A0A0D9RDT4 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000010548 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000008630.1 UniProtKB/TrEMBL
NCBI Gene CEP152 ENTREZGENE
PANTHER PTHR10337:SF6 UniProtKB/TrEMBL
  SHC TRANSFORMING PROTEIN UniProtKB/TrEMBL
UniProt A0A0D9RDT4 ENTREZGENE, UniProtKB/TrEMBL