RBPMS (RNA binding protein, mRNA processing factor)

Gene: RBPMS (RNA binding protein, mRNA processing factor) Chlorocebus sabaeus

Analyze

Symbol:

RBPMS

Name:

RNA binding protein, mRNA processing factor

RGD ID:

18385433

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); pre-mRNA binding (ortholog); INVOLVED IN protein-containing complex assembly (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytoplasmic stress granule (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

RNA binding protein with multiple splicing; RNA-binding protein with multiple splicing

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	28,496,583 - 28,684,487 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	28,496,075 - 28,659,907 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666052	13,423,707 - 13,611,941 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of DNA-templated transcription (IEA)

protein-containing complex assembly (ISO)

regulation of alternative mRNA splicing, via spliceosome (ISO)

response to oxidative stress (IEA)

SMAD protein signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

cytoplasmic stress granule (IEA)

cytosol (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

identical protein binding (ISO)

molecular adaptor activity (ISO)

mRNA 3'-UTR binding (IEA)

mRNA binding (IEA)

mRNA CDS binding (IEA)

nucleic acid binding (IEA)

pre-mRNA binding (ISO)

pre-mRNA intronic binding (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

RNA binding (IEA)

transcription coactivator activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

RBPMS
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	28,496,583 - 28,684,487 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	28,496,075 - 28,659,907 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666052	13,423,707 - 13,611,941 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

RBPMS
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	30,384,541 - 30,572,256 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	30,384,511 - 30,572,256 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	30,242,057 - 30,429,773 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	30,361,486 - 30,549,276 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	30,361,485 - 30,549,276	NCBI
Celera	8	29,200,833 - 29,388,215 (+)	NCBI		Celera
Cytogenetic Map	8	p12	NCBI
HuRef	8	28,786,611 - 28,974,229 (+)	NCBI		HuRef
CHM1_1	8	30,444,486 - 30,631,917 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	30,663,428 - 30,851,701 (+)	NCBI		T2T-CHM13v2.0

Rbpms
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	34,272,671 - 34,419,925 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	34,272,671 - 34,419,891 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	33,782,643 - 33,929,922 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	33,782,643 - 33,929,863 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	34,893,116 - 35,040,313 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	35,249,999 - 35,395,753 (-)	NCBI		MGSCv36	mm8
Celera	8	36,420,353 - 36,511,505 (-)	NCBI		Celera
Cytogenetic Map	8	A4	NCBI
cM Map	8	20.85	NCBI

Rbpms
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	64,942,159 - 65,098,504 (+)	NCBI		GRCr8
mRatBN7.2	16	58,239,370 - 58,395,424 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	58,239,474 - 58,395,426 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	63,579,457 - 63,713,962 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	66,993,105 - 67,127,638 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	62,213,707 - 62,348,200 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	61,954,569 - 62,109,998 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	61,954,590 - 62,096,497 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	61,618,879 - 61,774,268 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	62,009,626 - 62,163,466 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	56,277,529 - 56,412,446 (+)	NCBI		Celera
Cytogenetic Map	16	q12.2-q12.3	NCBI

Rbpms
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955463	6,901,263 - 6,988,870 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955463	6,817,570 - 6,973,393 (+)	NCBI	ChiLan1.0	ChiLan1.0

RBPMS
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	48,944,932 - 49,134,955 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	24,660,519 - 24,850,850 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	29,685,311 - 29,875,614 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	26,876,710 - 27,065,387 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	26,965,830 - 27,065,387 (+)	Ensembl	panpan1.1		panPan2

RBPMS
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	33,788,675 - 33,961,595 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	33,788,781 - 33,960,286 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	34,250,794 - 34,424,085 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	35,817,904 - 35,991,250 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	16	33,916,132 - 34,089,651 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	34,486,116 - 34,659,162 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	34,606,907 - 34,780,115 (-)	NCBI		UU_Cfam_GSD_1.0

Rbpms
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	56,959,279 - 57,127,286 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936792	236,503 - 404,510 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936792	236,509 - 404,510 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBPMS
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	54,539,238 - 54,725,583 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	54,538,583 - 54,725,605 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	61,933,646 - 62,143,596 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Rbpms
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624839	7,068,761 - 7,242,159 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624839	7,068,656 - 7,243,627 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36		20
Low		15	37
Below cutoff		5	3

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007962084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007962085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007962088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007962089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007962090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037983624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000013934 ⟹ ENSCSAP00000011917

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	8	28,496,075 - 28,659,907 (+)	Ensembl

RefSeq Acc Id:

XM_007962084 ⟹ XP_007960275

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	28,496,583 - 28,657,674 (+)	NCBI
Vero_WHO_p1.0	NW_023666052	13,449,402 - 13,611,941 (-)	NCBI

Sequence:

show sequence

AGAGGGGAGGGAGGAAGACGAGAGAAAGGGAGCTGCTTCTATCCCGGACTTCCCAGAGCCTGCC
TGGAGCGCGCACTCAGCGGCTCTCGGGTCCCAGCGTCCCAGCCGCGGCCCGCGCCTCTCCGCCC
CGCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTCTAGGCACCCTGG
TCCCCTCCTTCCAGCGGCTGCAGCCCCCAGCCCCAACTCTCTGCGCTTCCTCCTGGGACGCGCG
TCCTCGCCCCATCCTTTGCTTCCTTCCTTCCTTCTTCCTTCCTCCCCTGGCTCCCGCCCTCCCT
ATCCAGGTCGCCCTCCCGGGGCCCGATTGTCTCGGTGCCCCGCTCTCGGCCCGCGCCCTGCCCC
GTCTCTCCCTCGCACTTCCTGAGTCGCCCGCCGTTGCCGTCGCAGTCTCGCCGCGGGAGCCCCA
GCCCAGCCCGAGCCCGAGCCCGACAGCCACTGCCCCGGCTCCAGCTCCAGCCCCGCAGCCCGCG
GCGCCCGCCCGAGGGAGCCCCGGCGCCCGGGGAAGGCTACAGTGGGCGAGCGCGCCCTCGCCCA
GCCCCGCGCCCCAGCCCTGCCCGGCCCGGCGAGGAAGGACCGGGAAGATGAACAACGGCGGCAA
AGCCGAGAAGGAGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCGGACCCTATTT
GTTAGTGGCCTTCCTCTGGATATCAAACCTCGGGAGCTCTATCTGCTTTTCAGACCATTTAAGG
GCTATGAGGGTTCTCTTATAAAGCTCACATCTAAACAGCCTGTAGGTTTTGTCAGTTTTGACAG
TCGCTCAGAAGCAGAAGCTGCAAAGAATGCTTTGAATGGCATCCGCTTCGATCCTGAAATTCCG
CAAACACTACGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAAGAACAAACTCGTAGGGA
CTCCAAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGAGAGCCATATGA
GCTCACAGTGCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCA
GCGGAGTTAGCGCCTGCTCTACCTCCTCCTGCTTTCACCTATCCCGCTTCACTGCATGCCCAGG
TAATTGATACCCATCGGCCACGACTTCACTCACTCCACCTCCAGTCCTTTCAAACTTGGTTCCC
CAGAGCACACCATACAACTAACACCTATCCAGCTAACAGATCCACCTTCAAGAGATTAATGATC
CCCTCTAAATCAAGCTGACACTCCTTCAGGACTTACGAGGATCGTCTGACAGCAATGATATCAC
CCACTGCCTGATGTTTGCCCCAAATGACACCTCTCTCTTCCTTAATGATCTCACCTCATATCGC
ACATAAGAGACTGGGGCAAGTTTATCCACTTGGCTCCCAGCTAGCTAGAGGGCATCACCGGAGC
GTACACGTGTGTGCCTTGTGTGGAAGGGCTACAGAGGAAGGTGTGTGCTAGGAGCAGGGGATAT
GTGCGTCTGTGCGTGTTTCTGTGTGTTGAGAGTTTTCCACTCTCGTGTACTGTGAGAAGAATCT
CTGACCAAAGGGAAAGCTTCCATGGGGGAAGGCTATACTTTCTTAAATATGTTACAGGAAAGAT
TAA

hide sequence

RefSeq Acc Id:

XM_007962085 ⟹ XP_007960276

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	28,496,588 - 28,660,002 (+)	NCBI
Vero_WHO_p1.0	NW_023666052	13,448,196 - 13,611,941 (-)	NCBI

Sequence:

show sequence

GGAGGGAGGAAGACGAGAGAAAGGGAGCTGCTTCTATCCCGGACTTCCCAGAGCCTGCCTGGAG
CGCGCACTCAGCGGCTCTCGGGTCCCAGCGTCCCAGCCGCGGCCCGCGCCTCTCCGCCCCGCTC
CTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTCTAGGCACCCTGGTCCCC
TCCTTCCAGCGGCTGCAGCCCCCAGCCCCAACTCTCTGCGCTTCCTCCTGGGACGCGCGTCCTC
GCCCCATCCTTTGCTTCCTTCCTTCCTTCTTCCTTCCTCCCCTGGCTCCCGCCCTCCCTATCCA
GGTCGCCCTCCCGGGGCCCGATTGTCTCGGTGCCCCGCTCTCGGCCCGCGCCCTGCCCCGTCTC
TCCCTCGCACTTCCTGAGTCGCCCGCCGTTGCCGTCGCAGTCTCGCCGCGGGAGCCCCAGCCCA
GCCCGAGCCCGAGCCCGACAGCCACTGCCCCGGCTCCAGCTCCAGCCCCGCAGCCCGCGGCGCC
CGCCCGAGGGAGCCCCGGCGCCCGGGGAAGGCTACAGTGGGCGAGCGCGCCCTCGCCCAGCCCC
GCGCCCCAGCCCTGCCCGGCCCGGCGAGGAAGGACCGGGAAGATGAACAACGGCGGCAAAGCCG
AGAAGGAGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCGGACCCTATTTGTTAG
TGGCCTTCCTCTGGATATCAAACCTCGGGAGCTCTATCTGCTTTTCAGACCATTTAAGGGCTAT
GAGGGTTCTCTTATAAAGCTCACATCTAAACAGCCTGTAGGTTTTGTCAGTTTTGACAGTCGCT
CAGAAGCAGAAGCTGCAAAGAATGCTTTGAATGGCATCCGCTTCGATCCTGAAATTCCGCAAAC
ACTACGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAAGAACAAACTCGTAGGGACTCCA
AACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGAGAGCCATATGAGCTCA
CAGTGCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGA
GTTAGCGCCTGCTCTACCTCCTCCTGCTTTCACCTATCCCGCTTCACTGCATGCCCAGTGTTTC
TCTCCTGAGGCAAAGCCCAACACACCTGTCTTTTGTCCACTTCTCCAGCAAATTAGATTTGTCT
CTGGGAATGTGTTTGTAACATACCAACCTACTGCAGACCAGCAGAGGGAGCTCCCATGTTGAAT
TTGTTAGCTATCTTTCCCCCCTTTCGCAAAAACTATTTCTTGACGACCTTTGAGAGATTTCAAT
AAAAATTTTAATCAGAGCAAAAATGA

hide sequence

RefSeq Acc Id:

XM_007962088 ⟹ XP_007960279

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	28,496,589 - 28,684,487 (+)	NCBI
Vero_WHO_p1.0	NW_023666052	13,423,707 - 13,611,941 (-)	NCBI

Sequence:

show sequence

GAGGGAGGAAGACGAGAGAAAGGGAGCTGCTTCTATCCCGGACTTCCCAGAGCCTGCCTGGAGC
GCGCACTCAGCGGCTCTCGGGTCCCAGCGTCCCAGCCGCGGCCCGCGCCTCTCCGCCCCGCTCC
TCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTCTAGGCACCCTGGTCCCCT
CCTTCCAGCGGCTGCAGCCCCCAGCCCCAACTCTCTGCGCTTCCTCCTGGGACGCGCGTCCTCG
CCCCATCCTTTGCTTCCTTCCTTCCTTCTTCCTTCCTCCCCTGGCTCCCGCCCTCCCTATCCAG
GTCGCCCTCCCGGGGCCCGATTGTCTCGGTGCCCCGCTCTCGGCCCGCGCCCTGCCCCGTCTCT
CCCTCGCACTTCCTGAGTCGCCCGCCGTTGCCGTCGCAGTCTCGCCGCGGGAGCCCCAGCCCAG
CCCGAGCCCGAGCCCGACAGCCACTGCCCCGGCTCCAGCTCCAGCCCCGCAGCCCGCGGCGCCC
GCCCGAGGGAGCCCCGGCGCCCGGGGAAGGCTACAGTGGGCGAGCGCGCCCTCGCCCAGCCCCG
CGCCCCAGCCCTGCCCGGCCCGGCGAGGAAGGACCGGGAAGATGAACAACGGCGGCAAAGCCGA
GAAGGAGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCGGACCCTATTTGTTAGT
GGCCTTCCTCTGGATATCAAACCTCGGGAGCTCTATCTGCTTTTCAGACCATTTAAGGGCTATG
AGGGTTCTCTTATAAAGCTCACATCTAAACAGCCTGTAGGTTTTGTCAGTTTTGACAGTCGCTC
AGAAGCAGAAGCTGCAAAGAATGCTTTGAATGGCATCCGCTTCGATCCTGAAATTCCGCAAACA
CTACGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAAGAACAAACTCGTAGGGACTCCAA
ACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGAGAGCCATATGAGCTCAC
AGTGCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGAG
TTAGCGCCTGCTCTACCTCCTCCTGCTTTCACCTATCCCGCTTCACTGCATGCCCAGATGCGCT
GGCTCCCTCCCTCCGAGGCTACTTCTCAGGGCTGGAAGTCCCGTCAGTTCTGCTGAATACTATG
TCCCAGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCAATCTTCAGTGGTGGC
TACTGTTCTCTAGCTGTTCTACAGAACTGGAGCATGCTGGCTTGAAAAAACCTTGCCCAGTTTT
GATCCCTTCAAGACTTTGCCACAGCCTCTATCACACATCTGTTTTTCTCGAAGAAAAAATATAA
TAAAAATGTTTTACTCTTTTACACTGTATAATTATAAGAAATAGCGTGTTATTTGTGAATGCAT
GGTCTGAAATTTCTGTACAGTTTGGAGATATTTTCAAACGAAACGTAAGAGAAGTCAACAATAA
AACCAAGAAAAGTGAGTATTTTTATACCAAACATTTTAAGTATGCTGGGATGGACAATCTTACA
CTGGGTTGGATCACAGTTTTTGTGCTTGACTTTTGAATGCTTGTAATTAAAAATATCTATTTTT
TTCCTCTGAAGTAAGTTGCATGTTTGAGGCATGTTTCCAAATATCAAAATTTCCTGAATTGTAT
TGTGAATATATAGAAATCTGTGCCTGGCCAAAGTCCAGGGTAAATTAGTAGCGTGGTGGTAGGT
GTTAGAAACAGAACTGTTACCTGCAGTGTTAGGTCTAGTATCCCAGTTCTCGTAGGACAGCCCT
GCAAGACAATCAACCAGAAGCCTCCAGGAGCTTCTACCTATGGCTTATTCACAACTGGGCAAGA
AAACATCGTTGGTAAGAACTGCGGAGTGTGCCCTTAGAAAGCCCTGGCAGCTCCAGCTGTGACT
GTATCAACGGTGTGCCAAGTGTGAGTTTGTACAGTTTTATGTTTCCACTCTCCTGTACATGTAG
CCACTCGATGCCTCACCCACCTTCCACAAGCCAGCCCCGCACCCCTCTCCCCCAGTGGAAGTGC
AGAGCCTGCCTCACTGGTAACGGGAAACCTTGGCTTGGGAGGCCAGCCCTGGCCCATGAAGGGG
CTGGCTGTGCCCAACCCACTTGGCTGCAGTGGGCAGCTCATGTCTCTATCTCCAAAGTGATGTT
TGCAAAACATTGGCTGAATTGAGCTGGTATTCCCAACTCTTGCGGCACTAGGCCAAACCGACCA
CATCCCATGAGCTCCCAAATGGCGTCTGCTCACTGTGAGACGAGACGCCACACCGCACAGGAGA
CGGAGGCAGTGGGCATTTGGAACCAATTCTGTTCAGACTTCGTCAAAGCCAAAGTCAGTCTGGT
GTTGTCAGTTGACACATCTCCAGAGTTCATGACAGCTCAACCTCTCCCCTTGTACAGAAGCCAT
TTGTAAAATCACATTGACCTAAATTCAGCTGCCAAACACAATCACAGTCTTTCCTATTGATCTG
CTCGGCTTATGTTGAAAATTTCAATGTCATGATTACCTGGTTGGTTTGGGGTTTTGTTTTGTTA
TTTTCCATTGGAAATAAAGATGTCAAGAACCTTTTAAAGGTCACCACAAAAAAACCAAGGCCAG
GAGTGAAGGGCTCTTTCTTAGCGTAAATAAGGGGAAAGGGCAGTTAGCTCGGGGACTTGTGACA
GATCCACTTTGGTGTTCAAGGACCTGCTTATGCCCTCAGTGCCACTTGGTCTTGGTGAGATGCC
TGTGCTCCTCTACGGCAGACGGCTGCTTCTGCACAGTCTCCTCCGCTTTCATAACTGTTTAAAG
GTACTTTTCTATTGTCATTTTTAAAAAATAAAGTGTTTATTCCAGCCCTCA

hide sequence

RefSeq Acc Id:

XM_037983624 ⟹ XP_037839552

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666052	13,448,196 - 13,605,602 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007960275	(Get FASTA)	NCBI Sequence Viewer
	XP_007960276	(Get FASTA)	NCBI Sequence Viewer
	XP_007960279	(Get FASTA)	NCBI Sequence Viewer
	XP_037839552	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000011917
	ENSCSAP00000011917.1

RefSeq Acc Id:	XP_007960275 ⟸ XM_007962084
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007960276 ⟸ XM_007962085
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RTH8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007960279 ⟸ XM_007962088
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSCSAP00000011917 ⟸ ENSCSAT00000013934

RefSeq Acc Id:	XP_037839552 ⟸ XM_037983624
- Peptide Label:	isoform X4

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000015838	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000013934.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
NCBI Gene	RBPMS	ENTREZGENE
PANTHER	RNA-BINDING PROTEIN WITH MULTIPLE SPLICING	UniProtKB/TrEMBL
	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A0D9RTH8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar