RSRP1 (arginine and serine rich protein 1)

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Gene: RSRP1 (arginine and serine rich protein 1) Chlorocebus sabaeus

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Symbol:

RSRP1

Name:

arginine and serine rich protein 1

RGD ID:

18376384

Description:

INVOLVED IN spliceosomal complex assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Rh deficiency syndrome (ortholog); Rh isoimmunization (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

arginine/serine-rich protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	107,454,761 - 107,460,356 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	107,455,194 - 107,460,062 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	8,902,344 - 8,907,946 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

Rh deficiency syndrome (ISO)

Rh isoimmunization (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

spliceosomal complex assembly (ISO)

Cellular Component

nucleus (IEA)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

RSRP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	107,454,761 - 107,460,356 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	107,455,194 - 107,460,062 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	8,902,344 - 8,907,946 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

RSRP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	25,242,249 - 25,338,254 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	25,242,249 - 25,338,213 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	25,568,740 - 25,664,745 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	25,441,327 - 25,446,572 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	23,893,296 - 23,898,542 (-)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	23,822,803 - 23,828,049 (-)	NCBI		HuRef
CHM1_1	1	25,682,804 - 25,688,050 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	25,078,510 - 25,174,547 (-)	NCBI		T2T-CHM13v2.0

Rsrp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	134,650,936 - 134,654,681 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	134,650,903 - 134,654,982 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	134,923,625 - 134,927,370 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	134,923,592 - 134,927,671 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	134,479,540 - 134,483,285 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	134,195,716 - 134,199,449 (+)	NCBI		MGSCv36	mm8
Celera	4	133,109,099 - 133,112,842 (+)	NCBI		Celera
Cytogenetic Map	4	D3	NCBI
cM Map	4	67.15	NCBI

Rsrp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	152,431,448 - 152,435,202 (+)	NCBI		GRCr8
mRatBN7.2	5	147,147,774 - 147,151,523 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	147,147,784 - 147,151,523 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	149,848,500 - 149,852,227 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	151,619,934 - 151,623,673 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	151,604,742 - 151,608,469 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	153,260,930 - 153,264,669 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	153,260,930 - 153,264,669 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	157,029,893 - 157,033,632 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	153,698,946 - 153,702,685 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	153,709,036 - 153,712,648 (+)	NCBI
Celera	5	145,559,973 - 145,563,712 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Rsrp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955452	4,865,330 - 4,871,049 (-)	NCBI	ChiLan1.0	ChiLan1.0

RSRP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	201,686,519 - 201,691,816 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	200,784,456 - 200,789,729 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	24,440,889 - 24,446,165 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	25,415,172 - 25,420,438 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

RSRP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	74,545,114 - 74,549,840 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	74,545,264 - 74,549,832 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	71,117,695 - 71,122,440 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	75,105,021 - 75,109,772 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	75,105,054 - 75,109,767 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	71,928,358 - 71,933,070 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	72,934,749 - 72,939,500 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	73,939,291 - 73,944,034 (+)	NCBI		UU_Cfam_GSD_1.0

RSRP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	82,850,949 - 82,854,270 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	82,850,947 - 82,861,578 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007979979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005243389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005243411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000017584 ⟹ ENSCSAP00000017059

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	20	107,455,194 - 107,460,062 (+)	Ensembl

RefSeq Acc Id:

XM_007979979 ⟹ XP_007978170

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	107,454,761 - 107,460,356 (+)	NCBI
Vero_WHO_p1.0	NW_023666033	8,902,344 - 8,907,946 (-)	NCBI

Sequence:

show sequence

TGGTACTTTCGACGCGTCTGCTGACGCAGGTTCTCAGTGCGCGTCCGGACGTGGGAGGTGGAAG
TGTTGGAGTTCGCTGTTCGAGAGTGGGTACTAAAAGCTCCTTTTAGTCCTACGTTCCGAAAGGA
GGGCGTCTGTTGGGCCTTTCTCTCAGTCGTGAGGGAGGCGTCGACGGCCTGCGGAAGTCGTGAG
TTGAGGCTTGCGGGATCCTTTCCGGAGAAAGCGCAGGCTAAGGCCGCAGCGGAAGATGTCCAAC
TACGTGAACGACATGTGGCCCGGCTCGCCGCAGGAGAAGGATTCGCCCTCCGCCTCGCGGTCGG
GCGGGTCCAGCCGGCTCTCGTCGCGGTCTAGGAGCCGTTCTTTTTCCAGAAGCTCTCGGTCCCG
TTCCCGCGTCTCGAGTCAGTTTTCGTCCAGGAGTCGGAGTCGGAGCCGGAGCAGGAGGTCAAGG
TCCCGTTCCCGAAGGCGCCATCAGCGGAAGTACAGGCGCTACTCGCGGTCATACTCGCGGAGCC
GGTCGCGATCTCGCAGCCGCCGTTACCGAGAGAGGCGCTACGGCTTCTCCAGGAGATACTACCG
GTCTCCTTCGCGGTCCCGGTCCCGGTCCCGTAGCAGGTCGCGCTCTCGGGAAAGGTCGTACTAC
GGAAGGGCGTACGCGATGGCGCGGGGGCGGCGCTACTACGGCTTTGGTCGCACAGTGTATCCGG
AGGAGCGCAGCAGATGGAGGGACAGATCCAGGACGAGGTCGCGGAGCAGAACCCCCTTTCGCTT
AAGTGAGAAAGATCGAATGGAGCTGTTAGAAATAGCAAAAGCCAATGCAGCGAAAGCTTTAGGA
ACAACCAACATTGACTTGCCAGCTAGTCTCAGAACTGTACATGTAACCAAAGAAACAAGCCATG
GAATAGGTGTATCAAATGGTGCAAAGCCTGAACTGTCAGAAAAGGTAACAGAAGATGGAACTAG
AAATCCTAGTGAAAAACCTTCCCAGCAAAGAAGCATAGCTTTTAGCTCTAATAATTCTGTAGCA
AAACCAATACAAAAATCAGCTAAAGCTGCCACAGAAGAGACATCTTCAAGATCACCAAAAATAG
ATAAGAAAAAAAGTCCATATGGACTGTGGATACCTGTCTGAAAGGAGAAAACTAATGGCTAAGT
TTGCATGAAAACTGCACTTTATTACAAGTTAGTGTTTCTAGCTAGCATTATCCTATCCCTTTGA
GCCATTCAGGGGTACTTGTACATTTAAAAACCAACACAAAAAGATGTAAATACTTAATACTCAA
ATATTAACATTTTAGGTTTCTCTTGCAGATATGAGAAATAGCACAGATGGACCAAAGGTTATAC
ACAGGTGGGAGTCTTTTGTATATAGTTGTAAATATTTCCTTGGTTATGTAAAAATGAAATTTTT
TAGACACAGTAATTGAACTGTATTCCTGTTTTGTATATTTAATAAATTTCTTGTTTTAATTCTT
A

hide sequence

RefSeq Acc Id:

XR_005243389

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666033	8,902,346 - 8,907,946 (-)	NCBI

RefSeq Acc Id:

XR_005243411

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666033	8,902,346 - 8,907,946 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007978170	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000017059.1

RefSeq Acc Id:	XP_007978170 ⟸ XM_007979979
- UniProtKB:	A0A0D9S870 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000017059 ⟸ ENSCSAT00000017584

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000000949	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000017584.1	UniProtKB/TrEMBL
InterPro	RSRP1	UniProtKB/TrEMBL
KEGG Report	csab:103225354	UniProtKB/TrEMBL
NCBI Gene	RSRP1	ENTREZGENE
PANTHER	ARGININE/SERINE-RICH PROTEIN 1	UniProtKB/TrEMBL
	PTHR47622	UniProtKB/TrEMBL
Pfam	RSRP	UniProtKB/TrEMBL
UniProt	A0A0D9S870	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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