CORO1B (coronin 1B) - Rat Genome Database

Name: CORO1B
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: CORO1B (coronin 1B) Chlorocebus sabaeus

Analyze

Symbol:

CORO1B

Name:

coronin 1B

RGD ID:

18356110

Description:

ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament branching (ortholog); actin filament bundle assembly (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN actin filament (ortholog); cell leading edge (ortholog); cell periphery (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coronin-1B

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CORO1B (coronin 1B)	NCBI	Ortholog
Mus musculus (house mouse):	Coro1b (coronin, actin binding protein 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Coro1b (coronin 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Coro1b (coronin 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CORO1B (coronin 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CORO1B (coronin 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Coro1b (coronin 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CORO1B (coronin 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Coro1b (coronin 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	6,820,298 - 6,825,778 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	6,820,807 - 6,825,451 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	104,105,231 - 104,110,853 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aicardi-Goutieres Syndrome 3 (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Recurrent Infections, with Encephalopathy, Hepatic Dysfunction, and Cardiovascular Malformations (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (ISO)

actin filament branching (ISO)

actin filament bundle assembly (ISO)

actin filament organization (IEA)

cell migration (IEA)

cellular response to platelet-derived growth factor stimulus (ISO)

endothelial cell chemotaxis (ISO)

negative regulation of Arp2/3 complex-mediated actin nucleation (ISO)

negative regulation of lamellipodium morphogenesis (ISO)

negative regulation of smooth muscle cell chemotaxis (ISO)

positive regulation of lamellipodium morphogenesis (ISO)

protein kinase C signaling (ISO)

protein localization to cell leading edge (ISO)

ruffle organization (ISO)

wound healing (ISO)

Cellular Component

actin filament (ISO)

cell leading edge (ISO)

cell periphery (ISO)

cytoplasm (ISO)

cytosol (ISO)

glutamatergic synapse (ISO)

lamellipodium (ISO)

perinuclear region of cytoplasm (ISO)

plasma membrane (ISO)

stress fiber (IEA)

synapse (ISO)

Molecular Function

actin filament binding (IEA)

Arp2/3 complex binding (ISO)

cytoskeletal protein binding (ISO)

identical protein binding (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

CORO1B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	6,820,298 - 6,825,778 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	6,820,807 - 6,825,451 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	104,105,231 - 104,110,853 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CORO1B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	67,435,510 - 67,443,809 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	67,435,510 - 67,443,821 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	67,202,981 - 67,211,280 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	66,962,094 - 66,967,839 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	66,962,093 - 66,967,509	NCBI
Celera	11	64,538,716 - 64,544,461 (-)	NCBI		Celera
Cytogenetic Map	11	q13.2	NCBI
HuRef	11	63,533,695 - 63,539,469 (-)	NCBI		HuRef
CHM1_1	11	67,088,588 - 67,094,362 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	67,429,626 - 67,437,925 (-)	NCBI		T2T-CHM13v2.0

Coro1b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	4,198,610 - 4,204,034 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	4,198,618 - 4,204,034 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	4,148,611 - 4,154,035 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	4,148,619 - 4,154,035 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	4,148,663 - 4,154,035 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	4,148,660 - 4,154,035 (+)	NCBI		MGSCv36	mm8
Celera	19	4,019,506 - 4,025,174 (+)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	3.85	NCBI

Coro1b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	210,872,437 - 210,877,876 (+)	NCBI		GRCr8
mRatBN7.2	1	201,442,977 - 201,448,416 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	201,443,014 - 201,448,416 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	209,795,331 - 209,800,646 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	216,888,561 - 216,893,876 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	209,579,574 - 209,584,889 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	219,397,827 - 219,403,253 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	219,397,850 - 219,403,260 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	226,268,473 - 226,273,904 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	206,733,360 - 206,738,018 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	206,886,811 - 206,891,470 (+)	NCBI
Celera	1	198,988,122 - 198,992,780 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

Coro1b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	18,034,873 - 18,041,483 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	18,035,629 - 18,041,009 (+)	NCBI	ChiLan1.0	ChiLan1.0

CORO1B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	68,664,983 - 68,670,682 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	69,707,570 - 69,713,295 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	62,796,461 - 62,802,204 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	66,108,595 - 66,114,178 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	66,108,924 - 66,113,175 (-)	Ensembl	panpan1.1		panPan2

CORO1B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	50,027,274 - 50,031,601 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	50,027,275 - 50,050,907 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	48,636,818 - 48,642,027 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	50,948,522 - 50,953,731 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	50,948,563 - 50,956,322 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	50,161,842 - 50,167,053 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	49,736,338 - 49,741,544 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	50,530,844 - 50,536,059 (+)	NCBI		UU_Cfam_GSD_1.0

Coro1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	5,845,223 - 5,870,137 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936599	2,307,761 - 2,312,938 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936599	2,307,974 - 2,312,487 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CORO1B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	5,080,660 - 5,086,690 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	5,081,294 - 5,086,698 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	3,799,119 - 3,804,414 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Coro1b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	19,080,451 - 19,090,419 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	19,080,541 - 19,087,128 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36	19	47
Low		1	13
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007966072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007966146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007966209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000006664 ⟹ ENSCSAP00000004865

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	1	6,820,807 - 6,825,451 (+)	Ensembl

RefSeq Acc Id:

XM_007966072 ⟹ XP_007964263

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	6,820,298 - 6,825,778 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	104,105,231 - 104,110,853 (+)	NCBI

Sequence:

show sequence

CCCCCGCTCCCGGTCCCTCTGTCACTTCCTGAATCCCGCTTCCTGCTTCCCAGAGGCCGGGATC
CGGAACCGCCCGAAGCCGGTGCTGCAGCCCCCGGCTACCCCGGTGCCCCCGACATGTCCTTCCG
CAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGACCAGTGC
TACGAGGACATTCGCGTGTCCCGTGTTACCTGGGACAGCACCTTCTGCGCTGTCAACCCCAAGT
TCCTGGCAGTGATTGTGGAGGCCAGTGGCGGGGGTGCCTTTCTGGTGCTCCCCCTAAGCAAGAC
GGGCCGCATTGACAAGGCCTACCCGACGGTGTGTGGGCACACGGGACCTATCCTGGACATCGAC
TGGTGTCCCCACAATGACGAAGTCATAGCCAGCGGCTCGGAGGACTGCACGGTCATGGTGTGGC
AGATCCCAGAGAATGGGCTGACCTCCCCACTGACAGAGCCGGTGGTGGTACTGGAGGGGCACAC
CAAGCGAGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAACGTGCTGCTTAGTGCAGGCTGC
GACAACGTGGTACTCATCTGGAACGTGGGCACAGCAGAGGAGCTGTACCGCCTGGACAGCCTGC
ACCCTGACCTCATCTACAACGTCAGCTGGAACCGCAACGGCAGCCTGTTTTGCTCAGCGTGCAA
GGACAAAAGCGTGCGCATCATCGACCCCCGTCGGGGCACCCTGATGGCAGAGCGGGAGAAGGCT
CATGAGGGGGCCCGGCCCATGCGAGCCATCTTCCTGGCAGATGGCAAGGTGTTCACCACGGGCT
TCAGCCGAATGAGTGAGCGGCAGCTGGCACTCTGGGACCCAGAAAACCTCGAGGAACCCATGGC
CCTGCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGCCCTTCTACGACCCCGACACCAATGTG
GTCTACGTCTGCGGCAAGGGCGACTCCAGCATCCGGTACTTTGAGATCACAGAGGAGCCCCCCT
ACATCCACTTCCTGAACACATTCACCAGCAAGGAGCCCCAGCGGGGCATGGGCAGCATGCCCAA
GCGGGGCCTGGAGGTCAGCAAGTGCGAGATTGCCCGGTTCTACAAACTTCACGAGCGCAAGTGT
GAGCCCATCGTCATGACTGTGCCAAGAAAGTCGGACCTCTTCCAGGATGATCTGTACCCTGACA
CAGCCGGGCCCGAGGCAGCCCTGGAGGCTGAGGAGTGGGTGAGCGGGCGGGATGCTGACCCGAT
CCTCATCTCGCTGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGAAGATTAGCCGGCGC
AACGTGTTGTCTGACAGCCGGCCCGCCGCGGCCCTGGGCTCCTCCCGCCTGGGGGCCCCTGCAG
CCACCACCACTGCTGCTGATGCCACTCACAGCGGCAGCCTGACCAGAGCCGGGGAGGCTGGGAA
GCTGGAGGAGGTGATGCAGGAGCTGCGGGCCCTGAGAGCGCTGGTCAAGGAGCAGGGGGAGCGC
ATCTGCCGCCTGGAGGAGCAGTTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACG
CGCCACCTTCATCTCCTCCTCCGCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGC
TGGCTGGCTGCCCAGGGCCTCCGAGGCAGCCCAGGGGTCAGTTCCCACCCTGACCTGTCCCAGG
CCCAGGCCGAAGCCACCACCCAGCTTTCTTCACTGTTCCTGTGGAGGATTTCCATGCCCAGGCG
AGCTCCTCCTCCTCTGAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCCCCCGAGA
GGAGGCGGGAAGGTGGGCTCTATATTTTCATTCCAAATAAAATTCTCTTTCTAAAAGC

hide sequence

RefSeq Acc Id:

XM_007966146 ⟹ XP_007964337

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	6,820,298 - 6,825,776 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	104,105,350 - 104,110,853 (+)	NCBI

Sequence:

show sequence

CCCCCGCTCCCGGTCCCTCTGTCACTTCCTGAATCCCGCTTCCTGCTTCCCAGAGGCCGGGATC
CGGAACCGCCCGAAGCCGGTGCTGCAGCCCCCGGCTACCCCGGTGCCCCCGGAAGGAGGCTGCT
CCCGACTGGCTGGGACCTACAGCAGAGCTGAGAGCTCTCCAACTCCGGCACCTCCCACCTCCTG
CCCCGCACACACACCAGAGCCAGGGAGGGGCCCTGCGTCCTGCAAAGCCCCTCAGCACTCAGCG
GTGATCGGGGCCGGAGCATTAACCCCTCAGATCACTGCCTGCCGGACATGTCCTTCCGCAAAGT
GGTCCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGACCAGTGCTACGAG
GACATTCGCGTGTCCCGTGTTACCTGGGACAGCACCTTCTGCGCTGTCAACCCCAAGTTCCTGG
CAGTGATTGTGGAGGCCAGTGGCGGGGGTGCCTTTCTGGTGCTCCCCCTAAGCAAGACGGGCCG
CATTGACAAGGCCTACCCGACGGTGTGTGGGCACACGGGACCTATCCTGGACATCGACTGGTGT
CCCCACAATGACGAAGTCATAGCCAGCGGCTCGGAGGACTGCACGGTCATGGTGTGGCAGATCC
CAGAGAATGGGCTGACCTCCCCACTGACAGAGCCGGTGGTGGTACTGGAGGGGCACACCAAGCG
AGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAACGTGCTGCTTAGTGCAGGCTGCGACAAC
GTGGTACTCATCTGGAACGTGGGCACAGCAGAGGAGCTGTACCGCCTGGACAGCCTGCACCCTG
ACCTCATCTACAACGTCAGCTGGAACCGCAACGGCAGCCTGTTTTGCTCAGCGTGCAAGGACAA
AAGCGTGCGCATCATCGACCCCCGTCGGGGCACCCTGATGGCAGAGCGGGAGAAGGCTCATGAG
GGGGCCCGGCCCATGCGAGCCATCTTCCTGGCAGATGGCAAGGTGTTCACCACGGGCTTCAGCC
GAATGAGTGAGCGGCAGCTGGCACTCTGGGACCCAGAAAACCTCGAGGAACCCATGGCCCTGCA
GGAACTGGACTCGAGCAACGGGGCCCTGCTGCCCTTCTACGACCCCGACACCAATGTGGTCTAC
GTCTGCGGCAAGGGCGACTCCAGCATCCGGTACTTTGAGATCACAGAGGAGCCCCCCTACATCC
ACTTCCTGAACACATTCACCAGCAAGGAGCCCCAGCGGGGCATGGGCAGCATGCCCAAGCGGGG
CCTGGAGGTCAGCAAGTGCGAGATTGCCCGGTTCTACAAACTTCACGAGCGCAAGTGTGAGCCC
ATCGTCATGACTGTGCCAAGAAAGTCGGACCTCTTCCAGGATGATCTGTACCCTGACACAGCCG
GGCCCGAGGCAGCCCTGGAGGCTGAGGAGTGGGTGAGCGGGCGGGATGCTGACCCGATCCTCAT
CTCGCTGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGAAGATTAGCCGGCGCAACGTG
TTGTCTGACAGCCGGCCCGCCGCGGCCCTGGGCTCCTCCCGCCTGGGGGCCCCTGCAGCCACCA
CCACTGCTGCTGATGCCACTCACAGCGGCAGCCTGACCAGAGCCGGGGAGGCTGGGAAGCTGGA
GGAGGTGATGCAGGAGCTGCGGGCCCTGAGAGCGCTGGTCAAGGAGCAGGGGGAGCGCATCTGC
CGCCTGGAGGAGCAGTTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACGCGCCAC
CTTCATCTCCTCCTCCGCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTGGCTG
GCTGCCCAGGGCCTCCGAGGCAGCCCAGGGGTCAGTTCCCACCCTGACCTGTCCCAGGCCCAGG
CCGAAGCCACCACCCAGCTTTCTTCACTGTTCCTGTGGAGGATTTCCATGCCCAGGCGAGCTCC
TCCTCCTCTGAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCCCCCGAGAGGAGGC
GGGAAGGTGGGCTCTATATTTTCATTCCAAATAAAATTCTCTTTCTAAAA

hide sequence

RefSeq Acc Id:

XM_007966209 ⟹ XP_007964400

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	6,820,298 - 6,825,776 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	104,105,381 - 104,110,853 (+)	NCBI

Sequence:

show sequence

CCCCCGCTCCCGGTCCCTCTGTCACTTCCTGAATCCCGCTTCCTGCTTCCCAGAGGCCGGGATC
CGGAACCGCCCGAAGCCGGTGCTGCAGCCCCCGGCTACCCCGGTGCCCCCGCCTCCAAATCTCT
AAGCAGGAAGGAGGCTGCTCCCGACTGGCTGGGACCTACAGCAGAGCTGAGAGCTCTCCAACTC
CGGCACCTCCCACCTCCTGCCCCGCACACACACCAGAGCCAGGGAGGGGCCCTGCGTCCTGCAA
AGCCCCTCAGCACTCAGCGGTGATCGGGGCCGGAGCATTAACCCCTCAGATCACTGCCTGCCGG
ACATGTCCTTCCGCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCCGGTCAA
GAACGACCAGTGCTACGAGGACATTCGCGTGTCCCGTGTTACCTGGGACAGCACCTTCTGCGCT
GTCAACCCCAAGTTCCTGGCAGTGATTGTGGAGGCCAGTGGCGGGGGTGCCTTTCTGGTGCTCC
CCCTAAGCAAGACGGGCCGCATTGACAAGGCCTACCCGACGGTGTGTGGGCACACGGGACCTAT
CCTGGACATCGACTGGTGTCCCCACAATGACGAAGTCATAGCCAGCGGCTCGGAGGACTGCACG
GTCATGGTGTGGCAGATCCCAGAGAATGGGCTGACCTCCCCACTGACAGAGCCGGTGGTGGTAC
TGGAGGGGCACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAACGTGCTGCT
TAGTGCAGGCTGCGACAACGTGGTACTCATCTGGAACGTGGGCACAGCAGAGGAGCTGTACCGC
CTGGACAGCCTGCACCCTGACCTCATCTACAACGTCAGCTGGAACCGCAACGGCAGCCTGTTTT
GCTCAGCGTGCAAGGACAAAAGCGTGCGCATCATCGACCCCCGTCGGGGCACCCTGATGGCAGA
GCGGGAGAAGGCTCATGAGGGGGCCCGGCCCATGCGAGCCATCTTCCTGGCAGATGGCAAGGTG
TTCACCACGGGCTTCAGCCGAATGAGTGAGCGGCAGCTGGCACTCTGGGACCCAGAAAACCTCG
AGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGCCCTTCTACGACCC
CGACACCAATGTGGTCTACGTCTGCGGCAAGGGCGACTCCAGCATCCGGTACTTTGAGATCACA
GAGGAGCCCCCCTACATCCACTTCCTGAACACATTCACCAGCAAGGAGCCCCAGCGGGGCATGG
GCAGCATGCCCAAGCGGGGCCTGGAGGTCAGCAAGTGCGAGATTGCCCGGTTCTACAAACTTCA
CGAGCGCAAGTGTGAGCCCATCGTCATGACTGTGCCAAGAAAGTCGGACCTCTTCCAGGATGAT
CTGTACCCTGACACAGCCGGGCCCGAGGCAGCCCTGGAGGCTGAGGAGTGGGTGAGCGGGCGGG
ATGCTGACCCGATCCTCATCTCGCTGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGAA
GATTAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCGCGGCCCTGGGCTCCTCCCGCCTG
GGGGCCCCTGCAGCCACCACCACTGCTGCTGATGCCACTCACAGCGGCAGCCTGACCAGAGCCG
GGGAGGCTGGGAAGCTGGAGGAGGTGATGCAGGAGCTGCGGGCCCTGAGAGCGCTGGTCAAGGA
GCAGGGGGAGCGCATCTGCCGCCTGGAGGAGCAGTTGGGCCGCATGGAGAACGGGGATGCGTAG
GGCCACAGCCACGCGCCACCTTCATCTCCTCCTCCGCCCCCTTCCCACTCAGCTTCTGCCAGCG
GGTCGCACCGGGCTGGCTGGCTGCCCAGGGCCTCCGAGGCAGCCCAGGGGTCAGTTCCCACCCT
GACCTGTCCCAGGCCCAGGCCGAAGCCACCACCCAGCTTTCTTCACTGTTCCTGTGGAGGATTT
CCATGCCCAGGCGAGCTCCTCCTCCTCTGAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG
CTCCCCCCCGAGAGGAGGCGGGAAGGTGGGCTCTATATTTTCATTCCAAATAAAATTCTCTTTC
TAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007964263	(Get FASTA)	NCBI Sequence Viewer
	XP_007964337	(Get FASTA)	NCBI Sequence Viewer
	XP_007964400	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000004865
	ENSCSAP00000004865.1

RefSeq Acc Id:	XP_007964263 ⟸ XM_007966072
- UniProtKB:	A0A0D9R8C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007964400 ⟸ XM_007966209
- UniProtKB:	A0A0D9R8C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007964337 ⟸ XM_007966146
- UniProtKB:	A0A0D9R8C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000004865 ⟸ ENSCSAT00000006664

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000008604	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000006664.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
InterPro	Coronin	UniProtKB/TrEMBL
	DUF1899	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
KEGG Report	csab:103217721	UniProtKB/TrEMBL
NCBI Gene	CORO1B	ENTREZGENE
PANTHER	PTHR10856	UniProtKB/TrEMBL
	PTHR10856:SF24	UniProtKB/TrEMBL
Pfam	DUF1899	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
	WD40_4	UniProtKB/TrEMBL
PROSITE	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
SMART	DUF1899	UniProtKB/TrEMBL
	DUF1900	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50978	UniProtKB/TrEMBL
UniProt	A0A0D9R8C6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar