AL365203.2 (novel transcript) - Rat Genome Database

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Gene: AL365203.2 (novel transcript) Homo sapiens
Analyze
Symbol: AL365203.2
Name: novel transcript
RGD ID: 16566673
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1032,887,255 - 32,889,311 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
COVID-19  (HEP)

References

References - curated
# Reference Title Reference Citation
1. Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients. Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363.

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:110
Count of miRNA genes:107
Interacting mature miRNAs:109
Transcripts:ENST00000609742
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 611 399 50 42 149 41 163 468 28 39 72 214 2 40 125
Low 1805 2349 1669 578 1216 421 4145 1683 3115 379 1369 1389 168 1164 2636 4
Below cutoff 15 231 4 2 461 2 47 41 564 7 5 27

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000609742
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1032,887,255 - 32,889,311 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL365203.2 COSMIC
Ensembl Genes ENSG00000273038 Ensembl
GTEx ENSG00000273038 GTEx
Human Proteome Map AL365203.2 Human Proteome Map