AL021546.1 (novel protein) - Rat Genome Database

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Gene: AL021546.1 (novel protein) Homo sapiens
Analyze
Symbol: AL021546.1
Name: novel protein
RGD ID: 16550778
Description: ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (inferred); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (inferred); mitochondrial translation (inferred); regulation of translational fidelity (inferred); FOUND IN mitochondrion
Type: protein-coding
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl12120,438,198 - 120,460,006 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:120
Interacting mature miRNAs:126
Transcripts:ENST00000551806
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system appendage entire extraembryonic component
High
Medium
Low 32 9 6 35 6 12 5 14 20 51 59 3
Below cutoff 117 3 109 75 208 78 137 41 100 155 143 200 4 1 2

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000551806   ⟹   ENSP00000450281
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12120,438,198 - 120,460,006 (+)Ensembl
Protein Sequences
Ensembl Protein ENSP00000450281.1
Reference Protein Sequences
RefSeq Acc Id: ENSP00000450281   ⟸   ENST00000551806


Additional Information

Database Acc Id Source(s)
COSMIC AL021546.1 COSMIC
Ensembl Genes ENSG00000111780 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENST00000551806.1 UniProtKB/TrEMBL
Gene3D-CATH 4.10.95.10 UniProtKB/TrEMBL
GTEx ENSG00000111780 GTEx
Human Proteome Map AL021546.1 Human Proteome Map
InterPro Asp/Glu-ADT_csu UniProtKB/TrEMBL
  Asp/Glu-ADT_sf_sub_c UniProtKB/TrEMBL
  Cyt_c_oxidase_su6a_sf UniProtKB/TrEMBL
PANTHER GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT C, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR15004 UniProtKB/TrEMBL
Pfam Glu-tRNAGln UniProtKB/TrEMBL
Superfamily-SCOP SSF141000 UniProtKB/TrEMBL
  SSF81411 UniProtKB/TrEMBL
UniProt H0YIV9_HUMAN UniProtKB/TrEMBL