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Gene: Atrip (ATR interacting protein) Rattus norvegicus
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Symbol: Atrip
Name: ATR interacting protein
Description: Predicted to have K63-linked polyubiquitin modification-dependent protein binding activity. Predicted to be involved in DNA damage checkpoint and DNA repair. Predicted to localize to the nucleoplasm. Orthologous to human ATRIP (ATR interacting protein); INTERACTS WITH 2-methoxyethanol; bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATR-interacting protein; LOC301014
Orthologs:
Homo sapiens (human) : ATRIP (ATR interacting protein)  HGNC  Alliance
Mus musculus (house mouse) : Atrip (ATR interacting protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atrip (ATR interacting protein)
Pan paniscus (bonobo/pygmy chimpanzee) : ATRIP (ATR interacting protein)
Canis lupus familiaris (dog) : ATRIP (ATR interacting protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atrip (ATR interacting protein)
Sus scrofa (pig) : ATRIP (ATR interacting protein)
Chlorocebus sabaeus (green monkey) : ATRIP (ATR interacting protein)
Heterocephalus glaber (naked mole-rat) : Atrip (ATR interacting protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08117,797,954 - 117,811,989 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,797,842 - 117,811,975 (-)Ensembl
Rnor_5.08117,149,699 - 117,163,734 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48114,073,321 - 114,087,356 (-)NCBIRGSC3.4rn4RGSC3.4
Celera8108,999,733 - 109,013,768 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atrip
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1626390
Created: 2007-08-04
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.