1700061E17Rik (RIKEN cDNA 1700061E17 gene) - Rat Genome Database

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Gene: 1700061E17Rik (RIKEN cDNA 1700061E17 gene) Mus musculus
Analyze
Symbol: 1700061E17Rik
Name: RIKEN cDNA 1700061E17 gene
RGD ID: 1624814
MGI Page MGI
Description:
Type: gene (Ensembl: lncRNA)
Previously known as: ENSMUSG00000074049; predicted gene, ENSMUSG00000074049
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl9110,815,269 - 110,816,872 (+)EnsemblGRCm39 Ensembl
GRCm389110,986,201 - 110,987,804 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9110,986,201 - 110,987,804 (+)EnsemblGRCm38mm10GRCm38
MGSCv379110,888,705 - 110,890,308 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera9110,709,616 - 110,711,033 (+)NCBICelera
cM Map960.79NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide AC118727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000185439
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,815,269 - 110,816,872 (+)Ensembl
GRCm38.p6 Ensembl9110,986,201 - 110,987,804 (+)Ensembl
Protein Sequences
GenBank Protein BAE20794 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences

Promoters
RGD ID:15093678
Promoter ID:EPDNEWNC_M1585
Type:single initiation site
Name:1700061E17Rik_1
Description:RIKEN cDNA 1700061E17 gene [Source:MGISymbol;Acc:MGI:3642196]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389110,986,227 - 110,986,287EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000102060 Ensembl
MGD MGI:3642196 ENTREZGENE
NCBI Gene 100038395 ENTREZGENE
PhenoGen 1700061E17Rik PhenoGen
UniProt Q3V2K3_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-12 1700061E17Rik  RIKEN cDNA 1700061E17 gene  ENSMUSG00000074049  predicted gene, ENSMUSG00000074049  Symbol and/or name change 5135510 APPROVED