Gm10706 (predicted gene 10706) - Rat Genome Database

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Gene: Gm10706 (predicted gene 10706) Mus musculus
Analyze
Symbol: Gm10706
Name: predicted gene 10706
RGD ID: 1624767
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: ENSMUSG00000074508
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39914,615,745 - 14,628,388 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl914,615,938 - 14,630,354 (+)EnsemblGRCm39 Ensembl
GRCm38914,704,449 - 14,718,722 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl914,704,642 - 14,719,058 (+)EnsemblGRCm38mm10GRCm38
Celera911,984,220 - 11,998,704 (+)NCBICelera
Cytogenetic Map9A2NCBI
cM Map94.26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14610273   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in Gm10706
451 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:27
Count of miRNA genes:24
Interacting mature miRNAs:27
Transcripts:ENSMUST00000128327
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142326Tgq19_mtriglyceride QTL 19 (mouse)Not determined121060750Mouse
1300899Chol6_mcholesterol 6 (mouse)Not determined9129902913Mouse
13434920Dcollq1_mdifferential colonization level QTL 1 (mouse)9130341840Mouse
35673312Ari7_mantibody response to influenza 7, day 45, IgG3 (mouse)9780000122211296Mouse
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse


Expression


Sequence


RefSeq Acc Id: ENSMUST00000128327
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl914,615,938 - 14,630,354 (+)Ensembl
GRCm38.p6 Ensembl914,704,642 - 14,719,058 (+)Ensembl
RefSeq Acc Id: XR_001779095
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39914,615,745 - 14,628,388 (+)NCBI
GRCm38914,704,449 - 14,717,092 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935636
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39914,615,750 - 14,628,388 (+)NCBI
Sequence:
Protein Sequences
GenBank Protein BAE23676 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000074508 Ensembl
MGD MGI:3642794 ENTREZGENE
NCBI Gene 100038437 ENTREZGENE
PhenoGen Gm10706 PhenoGen
UniProt Q3UUF1_MOUSE UniProtKB/TrEMBL