B230104I21Rik (RIKEN cDNA B230104I21 gene) - Rat Genome Database

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Gene: B230104I21Rik (RIKEN cDNA B230104I21 gene) Mus musculus
Analyze
Symbol: B230104I21Rik
Name: RIKEN cDNA B230104I21 gene
RGD ID: 1624627
MGI Page MGI
Description:
Type: gene (Ensembl: lncRNA)
Previously known as: ENSMUSG00000073693
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl4154,420,584 - 154,434,375 (+)EnsemblGRCm39 Ensembl
GRCm384154,346,149 - 154,350,565 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4154,336,127 - 154,349,918 (+)EnsemblGRCm38mm10GRCm38
MGSCv374153,710,236 - 153,724,027 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera4156,628,165 - 156,632,598 (+)NCBICelera
cM Map484.04NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:167
Count of miRNA genes:156
Interacting mature miRNAs:167
Transcripts:ENSMUST00000181143
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000181143
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4154,420,584 - 154,434,375 (+)Ensembl
GRCm38.p6 Ensembl4154,336,127 - 154,349,918 (+)Ensembl
RefSeq Acc Id: XR_881625
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384154,346,149 - 154,350,565 (+)NCBI
RefSeq Acc Id: XR_888174
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
Celera4156,628,165 - 156,632,598 (+)NCBI
Protein Sequences
GenBank Protein BAE24216 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000097871 Ensembl
MGD MGI:3642713 ENTREZGENE
NCBI Gene 100038561 ENTREZGENE
PhenoGen B230104I21Rik PhenoGen
UniProt Q3USW4_MOUSE UniProtKB/TrEMBL