Hba-a2 (hemoglobin alpha, adult chain 2) - Rat Genome Database

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Gene: Hba-a2 (hemoglobin alpha, adult chain 2) Mus musculus
Analyze
Symbol: Hba-a2
Name: hemoglobin alpha, adult chain 2
RGD ID: 1624586
MGI Page MGI
Description: Predicted to enable G protein-coupled receptor binding activity. Predicted to contribute to haptoglobin binding activity and peroxidase activity. Acts upstream of or within erythrocyte development; in utero embryonic development; and response to bacterium. Predicted to be located in extracellular space. Predicted to be part of haptoglobin-hemoglobin complex and hemoglobin complex. Is expressed in liver; visceral pericardium; and yolk sac. Human ortholog(s) of this gene implicated in Heinz body anemia; alpha thalassemia; familial erythrocytosis 7; and hemoglobin H disease. Orthologous to human HBA1 (hemoglobin subunit alpha 1) and HBA2 (hemoglobin subunit alpha 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: alpha 2 globin
RGD Orthologs
Human
Rat
Dog
Alliance Genes
More Info more info ...
Related Pseudogenes: Hba-ps4  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,246,492 - 32,247,310 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,246,489 - 32,247,298 (+)EnsemblGRCm39 Ensembl
GRCm381132,296,492 - 32,297,310 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,296,489 - 32,297,298 (+)EnsemblGRCm38mm10GRCm38
MGSCv371132,196,492 - 32,197,310 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1134,701,680 - 34,701,823 (+)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.87NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
aconitine  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
antimycin A  (ISO)
barium sulfate  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
buspirone  (ISO)
butanal  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
capecitabine  (ISO)
carbon nanotube  (EXP)
ceric oxide  (ISO)
chlorpyrifos  (EXP,ISO)
clofibrate  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumarin  (ISO)
Cuprizon  (ISO)
cypermethrin  (EXP)
deguelin  (ISO)
dibromoacetic acid  (ISO)
dichloroacetic acid  (EXP)
diclofenac  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
flucloxacillin  (ISO)
flutamide  (ISO)
folic acid  (ISO)
furan  (ISO)
ivermectin  (ISO)
L-ethionine  (ISO)
linezolid  (ISO)
maneb  (EXP)
menadione  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-methyl-N-nitrosourea  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nickel subsulfide  (ISO)
nicotinamide  (ISO)
nimesulide  (ISO)
omeprazole  (ISO)
ozone  (EXP,ISO)
paracetamol  (ISO)
paraquat  (EXP)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenethyl isothiocyanate  (ISO)
PhIP  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (ISO)
potassium dichromate  (EXP)
progesterone  (ISO)
propanal  (ISO)
pyrimidifen  (ISO)
rotenone  (ISO)
sarin  (ISO)
selenium atom  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
streptozocin  (ISO)
tebuconazole  (ISO)
tebufenpyrad  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
toluene  (ISO)
tremolite asbestos  (EXP)
trichloroethene  (ISO)
Triptolide  (ISO)
triptonide  (EXP)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Hemoglobin and its derived peptides may play a role in the antibacterial mechanism of the vagina. Deng L, etal., Hum Reprod. 2009 Jan;24(1):211-8. doi: 10.1093/humrep/den318. Epub 2008 Sep 10.
2. Compensatory increase in alpha 1-globin gene expression in individuals heterozygous for the alpha-thalassemia-2 deletion. Liebhaber SA, etal., J Clin Invest. 1985 Sep;76(3):1057-64.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:277329   PMID:2444404   PMID:3032738   PMID:4611305   PMID:6947235   PMID:7357610   PMID:7550311   PMID:7904582   PMID:8781443   PMID:8838797   PMID:8854862   PMID:9843985  
PMID:9887098   PMID:9887104   PMID:10079113   PMID:10349636   PMID:10995745   PMID:11042159   PMID:11076861   PMID:11157800   PMID:11217851   PMID:12466851   PMID:12644183   PMID:16002065  
PMID:16141072   PMID:16141073   PMID:18094026   PMID:18245844   PMID:18687678   PMID:21706023   PMID:22187428   PMID:23012479   PMID:31624071  


Genomics

Comparative Map Data
Hba-a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,246,492 - 32,247,310 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,246,489 - 32,247,298 (+)EnsemblGRCm39 Ensembl
GRCm381132,296,492 - 32,297,310 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,296,489 - 32,297,298 (+)EnsemblGRCm38mm10GRCm38
MGSCv371132,196,492 - 32,197,310 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1134,701,680 - 34,701,823 (+)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.87NCBI
HBA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3816172,876 - 173,710 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl16172,876 - 173,710 (+)EnsemblGRCh38hg38GRCh38
GRCh3716222,875 - 223,709 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3616162,875 - 163,708 (+)NCBINCBI36Build 36hg18NCBI36
Build 3416162,874 - 163,705NCBI
Celera16426,165 - 427,036 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef16140,887 - 141,750 (+)NCBIHuRef
CHM1_116222,852 - 223,715 (+)NCBICHM1_1
T2T-CHM13v2.016166,917 - 167,751 (+)NCBIT2T-CHM13v2.0
Hba-a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81015,828,291 - 15,829,138 (-)NCBIGRCr8
mRatBN7.21015,323,830 - 15,324,677 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1015,307,815 - 15,338,392 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1020,070,156 - 20,071,003 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01019,559,041 - 19,559,888 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01015,051,812 - 15,052,659 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01015,589,364 - 15,590,207 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1015,589,364 - 15,590,220 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01015,484,459 - 15,485,302 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41015,570,930 - 15,571,773 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11015,571,977 - 15,572,821 (-)NCBI
Celera1014,991,420 - 14,992,263 (-)NCBICelera
Cytogenetic Map10q12NCBI
LOC100855558
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1640,328,053 - 40,329,002 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha641,591,692 - 41,593,018 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0640,671,209 - 40,672,537 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1640,359,320 - 40,360,638 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0640,320,283 - 40,321,596 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0640,798,910 - 40,800,239 (-)NCBIUU_Cfam_GSD_1.0

Variants

.
Variants in Hba-a2
18 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:304
Count of miRNA genes:243
Interacting mature miRNAs:258
Transcripts:ENSMUST00000093207, ENSMUST00000147010
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111226863739950840Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1300607Tnbs2_mtri-nitrobenzene sulfonic acid susceptible 2 (mouse)Not determined112489805235126680Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse
1301814Bbaa7_mB.burgdorferi-associated arthritis 7 (mouse)Not determined112601178044264695Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
25394552Skmw69_mskeletal muscle weight 69, TA (mouse)112969902932329535Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
25394550Skmw71_mskeletal muscle weight 71, gastroc (mouse)113127543232745567Mouse
25394551Skmw70_mskeletal muscle weight 70, EDL (mouse)113132273732594975Mouse
25394558Skmw72_mskeletal muscle weight 72, soleus (mouse)113132943032785551Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse

Markers in Region
Hba-a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,296,787 - 32,297,108UniSTSGRCm38
GRCm381132,283,970 - 32,284,291UniSTSGRCm38
MGSCv371132,196,787 - 32,197,108UniSTSGRCm37
MGSCv371132,183,970 - 32,184,291UniSTSGRCm37
Cytogenetic Map11A4UniSTS
cM Map1116.0UniSTS
cM Map1116.0UniSTS
Hba-a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A4UniSTS
Hba-a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,296,826 - 32,297,194UniSTSGRCm38
GRCm381132,284,009 - 32,284,377UniSTSGRCm38
MGSCv371132,184,009 - 32,184,377UniSTSGRCm37
MGSCv371132,196,826 - 32,197,194UniSTSGRCm37
Cytogenetic Map11A4UniSTS
cM Map1116.0UniSTS
Hba-a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,296,530 - 32,297,119UniSTSGRCm38
GRCm381132,283,713 - 32,284,302UniSTSGRCm38
MGSCv371132,183,713 - 32,184,302UniSTSGRCm37
MGSCv371132,196,530 - 32,197,119UniSTSGRCm37
Cytogenetic Map11A4UniSTS
cM Map1116.0UniSTS
Hba-a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,296,809 - 32,297,136UniSTSGRCm38
GRCm381132,283,992 - 32,284,319UniSTSGRCm38
MGSCv371132,183,992 - 32,184,319UniSTSGRCm37
MGSCv371132,196,809 - 32,197,136UniSTSGRCm37
Cytogenetic Map11A4UniSTS
cM Map1116.0UniSTS
Hba-a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A4UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001083955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK002222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL662780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY016021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF740193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF605437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M10466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M10840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M26895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000093207   ⟹   ENSMUSP00000090895
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,246,489 - 32,247,298 (+)Ensembl
GRCm38.p6 Ensembl1132,296,489 - 32,297,298 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147010
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,246,628 - 32,247,255 (+)Ensembl
GRCm38.p6 Ensembl1132,296,628 - 32,297,255 (+)Ensembl
RefSeq Acc Id: NM_001083955   ⟹   NP_001077424
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,246,492 - 32,247,310 (+)NCBI
GRCm381132,296,492 - 32,297,310 (+)ENTREZGENE
MGSCv371132,196,492 - 32,197,310 (+)RGD
Celera1134,701,680 - 34,701,823 (+)RGD
cM Map11 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001077424 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA37700 (Get FASTA)   NCBI Sequence Viewer  
  AAA37783 (Get FASTA)   NCBI Sequence Viewer  
  AAA37784 (Get FASTA)   NCBI Sequence Viewer  
  AAL32372 (Get FASTA)   NCBI Sequence Viewer  
  ABU63212 (Get FASTA)   NCBI Sequence Viewer  
  ABU63214 (Get FASTA)   NCBI Sequence Viewer  
  ABU63216 (Get FASTA)   NCBI Sequence Viewer  
  ABU63217 (Get FASTA)   NCBI Sequence Viewer  
  ABU63219 (Get FASTA)   NCBI Sequence Viewer  
  ABU63221 (Get FASTA)   NCBI Sequence Viewer  
  ABU63222 (Get FASTA)   NCBI Sequence Viewer  
  ABU63225 (Get FASTA)   NCBI Sequence Viewer  
  ABU63226 (Get FASTA)   NCBI Sequence Viewer  
  ABU63227 (Get FASTA)   NCBI Sequence Viewer  
  ABU63228 (Get FASTA)   NCBI Sequence Viewer  
  ABU63229 (Get FASTA)   NCBI Sequence Viewer  
  ABU63242 (Get FASTA)   NCBI Sequence Viewer  
  ABU63244 (Get FASTA)   NCBI Sequence Viewer  
  ABU63245 (Get FASTA)   NCBI Sequence Viewer  
  BAB24028 (Get FASTA)   NCBI Sequence Viewer  
  BAB26925 (Get FASTA)   NCBI Sequence Viewer  
  BAB27346 (Get FASTA)   NCBI Sequence Viewer  
  BAB27378 (Get FASTA)   NCBI Sequence Viewer  
  BAB27414 (Get FASTA)   NCBI Sequence Viewer  
  BAB28179 (Get FASTA)   NCBI Sequence Viewer  
  BAB31564 (Get FASTA)   NCBI Sequence Viewer  
  BAC25790 (Get FASTA)   NCBI Sequence Viewer  
  BAC36159 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000090895
  ENSMUSP00000090895.4
  ENSMUSP00000090897.4
RefSeq Acc Id: NP_001077424   ⟸   NM_001083955
- UniProtKB: P01942 (UniProtKB/Swiss-Prot),   Q91VB8 (UniProtKB/TrEMBL),   A8DUV3 (UniProtKB/TrEMBL),   Q8BPF4 (UniProtKB/TrEMBL),   Q9CWS5 (UniProtKB/TrEMBL),   Q9CY06 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000090895   ⟸   ENSMUST00000093207
Protein Domains
Globin family profile

Promoters
RGD ID:8674236
Promoter ID:EPDNEW_M15149
Type:initiation region
Name:Hba-a2_1
Description:Mus musculus hemoglobin alpha, adult chain 2 (Hba-a2), mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381132,296,492 - 32,296,552EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96016 AgrOrtholog
Ensembl Genes ENSMUSG00000069917 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSG00000069919 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000093207 ENTREZGENE
  ENSMUST00000093207.4 UniProtKB/TrEMBL
  ENSMUST00000093209.4 UniProtKB/TrEMBL
Gene3D-CATH 1.10.490.10 UniProtKB/TrEMBL
InterPro Globin-like UniProtKB/TrEMBL
  Globin/Proto UniProtKB/TrEMBL
  Globin_subset UniProtKB/TrEMBL
  Haemoglobin_a UniProtKB/TrEMBL
  Haemoglobin_pi UniProtKB/TrEMBL
KEGG Report mmu:110257 UniProtKB/TrEMBL
  mmu:15122 UniProtKB/TrEMBL
MGD MGI:96016 ENTREZGENE
NCBI Gene 110257 ENTREZGENE
PANTHER HEMOGLOBIN FAMILY MEMBER UniProtKB/TrEMBL
  HEMOGLOBIN SUBUNIT ALPHA UniProtKB/TrEMBL
Pfam Globin UniProtKB/TrEMBL
PharmGKB HBA1 RGD
PhenoGen Hba-a2 PhenoGen
PRINTS ALPHAHAEM UniProtKB/TrEMBL
  PIHAEM UniProtKB/TrEMBL
PROSITE GLOBIN UniProtKB/TrEMBL
Superfamily-SCOP Globin_like UniProtKB/TrEMBL
UniProt A8DUV3 ENTREZGENE, UniProtKB/TrEMBL
  P01942 ENTREZGENE
  Q8BPF4 ENTREZGENE, UniProtKB/TrEMBL
  Q91VB8 ENTREZGENE, UniProtKB/TrEMBL
  Q9CWS5 ENTREZGENE, UniProtKB/TrEMBL
  Q9CY06 ENTREZGENE, UniProtKB/TrEMBL