Gm10768 (predicted gene 10768) - Rat Genome Database

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Gene: Gm10768 (predicted gene 10768) Mus musculus
Analyze
Symbol: Gm10768
Name: predicted gene 10768
RGD ID: 1624547
MGI Page MGI
Description: Enables miRNA binding activity. Acts upstream of or within with a positive effect on gene expression; gluconeogenesis; and insulin metabolic process. Acts upstream of or within miRNA metabolic process and response to hormone. Located in cytosol.
Type: ncrna
RefSeq Status: VALIDATED
Previously known as: ENSMUSG00000074828
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391943,827,242 - 43,829,284 (+)NCBIGRCm39GRCm39mm39
GRCm381943,838,803 - 43,840,845 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371943,913,293 - 43,915,335 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1944,622,029 - 44,624,072 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1936.67NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IDA)

Molecular Function
miRNA binding  (IDA,IMP)

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:29363576  


Genomics

Variants

.
Variants in Gm10768
51 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:348
Count of miRNA genes:279
Interacting mature miRNAs:299
Transcripts:ENSMUST00000099413
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191492301648923138Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191829516252295381Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191829516252295381Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192023431454234461Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
4141659Pbwg20_mpostnatal body weight growth 20 (mouse)Not determined192137870555378928Mouse
1558876W3q14_mweight 3 weeks QTL 14 (mouse)Not determined192231332653911504Mouse
12790634Ebm1_mEpidermolysis Bullosa modifier 1 (mouse)192498843958988439Mouse
1301451Ath16_matherosclerosis 16 (mouse)Not determined192542691759427005Mouse
13506250Renmq1_mrenal mercury accumulation QTL 1 (mouse)192738559461385705Mouse
4141138Femwf11_mfemur work to failure 11 (mouse)Not determined2814034861420004Mouse
1300683Fembm7_mfemoral bone morphometry 7 (mouse)Not determined193014122461420004Mouse
1301942Pas13_mpulmonary adenoma susceptibility 13 (mouse)Not determined193014123161420004Mouse
1301410Cd8mts6_mCD8 memory T cell subset 6 (mouse)Not determined193014123161420004Mouse
1300856Nobq2_mNew Zealand obese QTL 2 (mouse)Not determined193089788061420004Mouse
1301741Lith2_mlithogenic gene 2 (mouse)Not determined193299215861420004Mouse
1301639Stnn_mstriatal neuron number (mouse)Not determined193395195261420004Mouse
4141019Tgq29_mtriglyceride QTL 29 (mouse)Not determined3459678661420004Mouse
1301479Sluc1_msusceptibility to lung cancer 1 (mouse)Not determined193601694446761521Mouse
1302170Tanidd1_mtally ho associated non-insulin dependednt diabetes mellitus 1 (mouse)Not determined193675259761420004Mouse
13504736Ifvrq6_minfluenza virus resistance QTL 6 (mouse)193690291044913949Mouse
4141650Chldq9_mcholesterol and HDL QTL 9 (mouse)Not determined193788298261420004Mouse
1301466T2dm2_mtype 2 diabetes mellitus 2 (mouse)Not determined193837605061420004Mouse
1302104Lfp1_mlong free running period 1 (mouse)Not determined193918406461420004Mouse
10043896Bw21_mbody weight QTL 21 (mouse)Not determined193959606661420004Mouse
1300585Pgia12_mproteoglycan induced arthritis 12 (mouse)Not determined194258685961420004Mouse

Markers in Region
AI173996  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381943,837,471 - 43,837,557UniSTSGRCm38
MGSCv371943,911,961 - 43,912,047UniSTSGRCm37
Celera1944,620,691 - 44,620,777UniSTS
Cytogenetic Map19C3-D1UniSTS
Cytogenetic Map19C3UniSTS
cM Map1943.0UniSTS
Whitehead/MRC_RH19432.87UniSTS
Abcc2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381943,837,437 - 43,837,713UniSTSGRCm38
MGSCv371943,911,927 - 43,912,203UniSTSGRCm37
Celera1944,620,657 - 44,620,933UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map19C3-D1UniSTS
cM Map1943.0UniSTS


Expression


Sequence


RefSeq Acc Id: NR_033472
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391943,827,242 - 43,829,284 (+)NCBI
GRCm381943,838,803 - 43,840,845 (+)ENTREZGENE
MGSCv371943,913,293 - 43,915,335 (+)RGD
Celera1944,622,029 - 44,624,072 (+)RGD
cM Map19 ENTREZGENE
Sequence:
Protein Sequences
GenBank Protein BAE25614 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000025194 ENTREZGENE
Ensembl Transcript ENSMUST00000099413 ENTREZGENE
MGD MGI:3642139 ENTREZGENE
NCBI Gene 100038628 ENTREZGENE
PhenoGen Gm10768 PhenoGen
RNAcentral URS000075BE74 RNACentral