Fmr1os (FMRP translational regulator 1, opposite strand) - Rat Genome Database

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Gene: Fmr1os (FMRP translational regulator 1, opposite strand) Mus musculus
Analyze
Symbol: Fmr1os
Name: FMRP translational regulator 1, opposite strand
RGD ID: 1624537
MGI Page MGI
Description: Predicted to be located in cytoplasm.
Type: ncrna
RefSeq Status: VALIDATED
Previously known as: Asf; Asfmr1; ENSMUSG00000073146; fragile X mental retardation 1, opposite strand; fragile X mental retardation syndrome 1, opposite strand; Gm10474
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X67,711,120 - 67,722,005 (-)NCBIGRCm39GRCm39mm39
GRCm38X68,667,514 - 68,678,399 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37X65,920,689 - 65,931,574 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Cytogenetic MapXA7.1NCBI
cM MapX34.83NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14610273   PMID:16141072   PMID:16141073   PMID:17921506   PMID:18799693  


Genomics

Comparative Map Data
Fmr1os
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X67,711,120 - 67,722,005 (-)NCBIGRCm39GRCm39mm39
GRCm38X68,667,514 - 68,678,399 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37X65,920,689 - 65,931,574 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Cytogenetic MapXA7.1NCBI
cM MapX34.83NCBI
FMR1-AS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X147,909,431 - 147,911,817 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX147,909,431 - 147,911,817 (-)EnsemblGRCh38hg38GRCh38
GRCh37X146,990,949 - 146,993,335 (-)NCBIGRCh37GRCh37hg19GRCh37
CeleraX147,342,926 - 147,355,618 (-)NCBICelera
Cytogenetic MapXq27.3NCBI
HuRefX135,951,607 - 135,964,106 (-)NCBIHuRef
CHM1_1X146,901,803 - 146,914,535 (-)NCBICHM1_1
T2T-CHM13v2.0X146,174,059 - 146,176,445 (-)NCBIT2T-CHM13v2.0

Variants

.
Variants in Fmr1os
256 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
12050071Hstx2_mhybrid sterility, X chromosome 2 (mouse)X6392424768624700Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
12880401Emlq3_memotional learning QTL 3 (mouse)X5799218370090431Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse


Expression


Sequence


RefSeq Acc Id: NR_033481
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X67,711,120 - 67,722,005 (-)NCBI
GRCm38X68,667,514 - 68,678,399 (-)ENTREZGENE
MGSCv37X65,920,689 - 65,931,574 (-)RGD
cM MapX ENTREZGENE
Sequence:
Protein Sequences
GenBank Protein BAE28524 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
MGD MGI:3642368 ENTREZGENE
NCBI Gene 100038638 ENTREZGENE
PhenoGen Fmr1os PhenoGen
RNAcentral URS000075ACBC RNACentral
UniProt Q3UFN6_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-18 Fmr1os  FMRP translational regulator 1, opposite strand  Fmr1os  fragile X mental retardation 1, opposite strand  Symbol and/or name change 5135510 APPROVED
2018-06-05 Fmr1os  fragile X mental retardation 1, opposite strand    fragile X mental retardation syndrome 1, opposite strand  Symbol and/or name change 5135510 APPROVED
2015-05-05 Fmr1os  fragile X mental retardation syndrome 1, opposite strand  Gm10474  predicted gene 10474  Symbol and/or name change 5135510 APPROVED