Fam124a (family with sequence similarity 124, member A)

Gene: Fam124a (family with sequence similarity 124, member A) Mus musculus

Analyze

Symbol:

Fam124a

Name:

family with sequence similarity 124, member A

RGD ID:

1624474

MGI Page

MGI

Description:

Orthologous to human FAM124A (family with sequence similarity 124 member A).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

EG629059; hypothetical protein LOC629059; uncharacterized protein LOC629059

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	62,793,186 - 62,845,935 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	62,793,186 - 62,845,935 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	62,555,737 - 62,608,486 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	62,555,737 - 62,608,486 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	63,173,985 - 63,225,492 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	61,509,258 - 61,601,840 (+)	NCBI		MGSCv36	mm8
Celera	14	60,317,907 - 60,370,413 (+)	NCBI		Celera
Cytogenetic Map	14	D1	NCBI
cM Map	14	33.23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 13q14 deletion syndrome (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Wilson disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (EXP)

6-propyl-2-thiouracil (ISO)

all-trans-retinoic acid (ISO)

amitrole (ISO)

astemizole (ISO)

atrazine (ISO)

Benoxacor (EXP)

benzo[a]pyrene (EXP,ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (ISO)

bisphenol F (EXP)

cadmium dichloride (ISO)

chlorpyrifos (EXP)

clotrimazole (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

cyclosporin A (EXP)

diazinon (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

folic acid (EXP)

iron dichloride (ISO)

malathion (ISO)

mercury dibromide (ISO)

methimazole (ISO)

methylmercury chloride (ISO)

N,N-diethyl-m-toluamide (ISO)

N-Nitrosopyrrolidine (ISO)

ozone (EXP)

p-chloromercuribenzoic acid (ISO)

panobinostat (ISO)

paraquat (ISO)

permethrin (ISO)

phenylmercury acetate (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

SB 431542 (ISO)

sodium arsenite (EXP)

Soman (ISO)

sulfadimethoxine (ISO)

trichloroethene (EXP,ISO)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

Molecular Function

molecular_function (ND)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal heart morphology (IEA)

abnormal skin morphology (IEA)

abnormal spleen morphology (IEA)

abnormal thymus morphology (IEA)

enlarged heart (IEA)

enlarged spleen (IEA)

enlarged thymus (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11812828	PMID:12466851	PMID:15782199	PMID:16141072	PMID:16141073	PMID:21267068

Genomics

Comparative Map Data

Fam124a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	62,793,186 - 62,845,935 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	62,793,186 - 62,845,935 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	62,555,737 - 62,608,486 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	62,555,737 - 62,608,486 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	63,173,985 - 63,225,492 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	61,509,258 - 61,601,840 (+)	NCBI		MGSCv36	mm8
Celera	14	60,317,907 - 60,370,413 (+)	NCBI		Celera
Cytogenetic Map	14	D1	NCBI
cM Map	14	33.23	NCBI

FAM124A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	51,222,398 - 51,284,239 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	51,222,334 - 51,284,239 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	51,796,534 - 51,858,375 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	50,694,508 - 50,753,617 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	13	32,845,687 - 32,904,794 (+)	NCBI		Celera
Cytogenetic Map	13	q14.3	NCBI
HuRef	13	32,585,606 - 32,647,541 (+)	NCBI		HuRef
CHM1_1	13	51,764,001 - 51,825,843 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	13	50,437,377 - 50,499,211 (+)	NCBI		T2T-CHM13v2.0

Fam124a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	40,975,789 - 41,031,069 (+)	NCBI		GRCr8
mRatBN7.2	15	36,799,836 - 36,855,062 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	36,799,877 - 36,853,683 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	15	45,711,994 - 45,780,395 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	45,712,821 - 45,780,405 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	49,481,066 - 49,547,804 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	41,810,389 - 41,845,221 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	15	36,487,643 - 36,541,561 (+)	NCBI		Celera
Cytogenetic Map	15	p12	NCBI

Fam124a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	4,585,466 - 4,636,017 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	4,585,518 - 4,633,567 (+)	NCBI	ChiLan1.0	ChiLan1.0

FAM124A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	52,658,481 - 52,721,788 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	51,303,492 - 51,365,821 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	32,356,260 - 32,418,132 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	51,101,704 - 51,163,916 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	51,101,704 - 51,163,916 (+)	Ensembl	panpan1.1		panPan2

FAM124A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	786,588 - 809,284 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	755,773 - 840,454 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	704,329 - 789,369 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	705,570 - 789,986 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	625,803 - 710,516 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	674,938 - 759,632 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	693,299 - 778,018 (-)	NCBI		UU_Cfam_GSD_1.0

Fam124a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	160,570,340 - 160,621,942 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936565	4,080,867 - 4,105,740 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936565	4,058,280 - 4,106,803 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM124A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	16,572,302 - 16,658,162 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	16,572,298 - 16,658,094 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	16,913,364 - 16,987,791 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM124A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	29,107,009 - 29,168,154 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666057	14,654,764 - 14,716,046 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam124a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624748	2,962,022 - 3,016,880 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624748	2,964,460 - 3,016,835 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fam124a
1694 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	963
Count of miRNA genes:	572
Interacting mature miRNAs:	695
Transcripts:	ENSMUST00000039064, ENSMUST00000160745, ENSMUST00000161899, ENSMUST00000162987
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357589	Kdnw2_m	kidney weight 2 (mouse)			Not determined		14	20887473	121269804	Mouse
1357527	Epfpq1_m	epididymal fat percentage QTL 1 (mouse)			Not determined		14	21062450	71885801	Mouse
10043886	Cia49_m	collagen induced arthritis QTL 49 (mouse)			Not determined		14	29996994	63997133	Mouse
27226774	Tibl15_m	tibia length 15, 10 week (mouse)					14	30321957	87937436	Mouse
1300909	Ath13_m	atherosclerosis 13 (mouse)			Not determined		14	30335250	64335381	Mouse
1300998	Cia17_m	collagen induced arthritis 17 (mouse)			Not determined		14	30335250	64335381	Mouse
1300625	Cosz2_m	cocaine seizure 2 (mouse)			Not determined		14	35045797	68785736	Mouse
10043887	Cia50_m	collagen induced arthritis QTL 50 (mouse)			Not determined		14	37430185	71430320	Mouse
4142419	Tgq26_m	triglyceride QTL 26 (mouse)			Not determined			40337319	74337319	Mouse
1301777	Bglq15_m	body growth late QTL 15 (mouse)			Not determined		14	42962416	76962593	Mouse
1301424	Skull21_m	skull morphology 21 (mouse)			Not determined		14	42962416	76962593	Mouse
1300805	Mors3_m	modifier of obesity related sterility 3 (mouse)			Not determined		14	43037270	77037418	Mouse
1301091	Bbaa21_m	B.burgdorferi-associated arthritis 21 (mouse)			Not determined		14	43065847	77066045	Mouse
4141400	Nilac8_m	nicotine induced locomotor activity 8 (mouse)			Not determined		14	43065847	77066045	Mouse
1300605	El5_m	epilepsy 5 (mouse)			Not determined		14	49455425	83455556	Mouse
4142364	Pbwg18_m	postnatal body weight growth 18 (mouse)			Not determined		14	52281984	86282125	Mouse
1301489	Lbm10_m	lean body mass 10 (mouse)			Not determined		14	53761296	87761529	Mouse
12880432	Fgf23lq3_m	FGF23 serum level QTL 3 (mouse)					14	53937440	87937440	Mouse
10043889	Cia52_m	collagen induced arthritis QTL 52 (mouse)			Not determined		14	56082381	90082509	Mouse
1301562	Hwq1_m	heart weight quantitative locus 1 (mouse)			Not determined		14	56546745	90546941	Mouse
1357565	wrmod1_m	wobbler modifier 1 (mouse)			Not determined		14	58179640	101859473	Mouse
11039527	Ccc2_m	colitis susceptibility in the Collaborative Cross 2 (mouse)					14	59918612	94138217	Mouse
1300666	Fembm2_m	femoral bone morphometry 2 (mouse)			Not determined		14	62397460	96397680	Mouse

Markers in Region

UniSTS:237205

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	14	62,562,547 - 62,562,631	UniSTS	GRCm38
MGSCv37	14	63,181,384 - 63,181,468	UniSTS	GRCm37
Celera	14	60,325,859 - 60,325,943	UniSTS
Cytogenetic Map	14	D1	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001243857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036158777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC154516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK137188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK200207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AW049618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU921699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000039064 ⟹ ENSMUSP00000047681

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	62,793,186 - 62,845,935 (+)	Ensembl
GRCm38.p6 Ensembl	14	62,555,737 - 62,608,486 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000160745

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	62,793,224 - 62,802,615 (+)	Ensembl
GRCm38.p6 Ensembl	14	62,555,775 - 62,565,166 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000161899

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	62,793,186 - 62,843,488 (+)	Ensembl
GRCm38.p6 Ensembl	14	62,555,737 - 62,606,039 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000162987

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	62,793,186 - 62,825,972 (+)	Ensembl
GRCm38.p6 Ensembl	14	62,555,737 - 62,588,523 (+)	Ensembl

RefSeq Acc Id:

NM_001243857 ⟹ NP_001230786

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	62,793,186 - 62,845,934 (+)	NCBI
GRCm38	14	62,555,737 - 62,608,485 (+)	NCBI
Celera	14	60,318,496 - 60,372,464 (+)	ENTREZGENE
cM Map	14		ENTREZGENE

Sequence:

show sequence

CGGCCGCGAGAGGGCGCGGCGAGCGGCTTCCTCGCGGGGCCGGGTTGTTGCGGAGGCCGGAGAC
GAGGCTCTCGGAGGGTCCCCGGGGCCGAGGGAGCGCGGACGGCACGCGCGCCATGAACCCGAAG
GCGGGCGGTGAGGAAGAGGACTGCGTGGACTCTGGCGCCGAGACCGGAGGGTCCGACTACAGCC
ACCTGTCCTCCACCAGCAGTGAGCTTTCTGTGGAGGAGGCACAGGACCCTTTCCTGGTGAGCAT
CCACATCATCGCAGACCCAGGGGAGTCACAGCCACTGCAGGAGGCCATCGACAAGGTTTTGGCG
TGGGTTCACCCTGATCTCCCACTGTTCCGAGTGTCTGAGAGGCGCACAACCAGGCGAAGGCGGA
AGTCTCCCAAGGGTGCACAGCCGGCGCTGGCGGTGGTGCTGTTCCTACAGGAGGAGTACGGAGA
GGAGCAGATCCTACAGGTACACAGGGTGCTGCAGCAGCCGCCCTGGCGTCACCACCACACAGAG
CGAGTGCATGGCCGCTTCATACCCTACCTGCCTTGCAGTCAGGACTTCTTCACTCTGGCTCCCG
GGACCCCACTGTGGGCAATCAGGCCGGTGCACTACGGCAAGGAAATCGTGCGCTTCACCATCTA
CTGTCGCCATAACAGCTACACTGACAGCCTCCGCTTCTATGAGCTGATCTTGCGCCGGAGCCCC
AGCCAGCGGAAAGCAGACTTCTGCATCTTCCCCATTTTCTCCAATCTGGATGTGGACATCCAGT
TCTCCCTGAAAAGACTACCCTGCGACCAGAAGCCAGTGCCCACCGACTCCTCCGTGCTGGAGTT
CCGAGTGAAGGACATCGGGCAACTGGTACCGCTCCTTCCCAACCCCTGCAGCCCCATCAGCGAG
GGGCGCTGGCAGACTGAGGACCACGATGGCAACAAGATCCTTCTGCAGGCACAGAGGACACACA
AAAAGGCCCCCAAGTACAGCAGAGCACATCACTCCTCTGAGAAGAAACCACATTCTGCTCCTCC
TGCAGCGGTCGACACACCAAACACAGGACAGGGCAGCAGCCAGACAGCCCTACATGACAGCCCA
TCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTATAACACACAGTCGAGCACCTCCA
GCCCTGCCTGGTCTTTCCCGAGAAGCAAGTCTTTGTTTTGTTTGCCCAGTGGAGGCCCTTCCCC
AACTGAACCACAGCCACTACCGACCAATTCCCAGAGACACAGTGCATCGGAGTGGAAGCCTAGC
CGCCTCATGTCCATTGATGACTTAGAAGGGGCCCAAGAGACAGATGTGGACACAGGCCTGCGGC
TGTCCTCCTCAGACCTGTCTGTGGTCTCTGCATATTCTGCACCCAGTAGGTTTTACAACACAAT
AGAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCCAGCACACAAGAGTCCCAAGAAA
GGACCTATGCCCGCTGCCAGTGAGGTAAGCCCAGACACTGCCTGTGTTTCCCACCCTCTCTTCA
CCAAAGGGTCCCCCAGGCCTGCAGAGACAACTACTCCTGCTCTCTCAGCTTCTGATGCCTCCTT
GCTCACAGAGTCATCCACACACACCCCATGTCATGACCCCAAAGCCACACAGGGTGTCCAAGGC
ATGCTATTGCCTCCAACAACAGTTGGTCCTGAGACTGATGACATGGAGGAGTTCTACATCTGAG
CGCATCTTGGCTTTCAGACAGACTCAGTCACAGAAACTCGGGTACCACTGTGACCAGCTCTTTG
TTCACAGGGTGCTCTCAGCCCCATTTGCCAGCTGACTAGAACTTAATTATCTGTCTTGGGAGAC
TGTTGGCATGTTGACCATGCCACCTATCCTTAGCTGACAGGTGCCATATTTCTAGAGGTTCAGA
AAAAGGAAGAAGGAGGAGGAGGAGGAAAAGGAGGAGCAGGAAGAGGAGGAGGAGGAAGAGGAGG
AGGAGGAGGAGGGAGAGGAGGAGGAGGAAGAGAAGGAGAAGAAGAAGGAGAAGAAGGAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAACAAACACCTGACATTTTTATGGAAATACATTTTCAACACACTTAGCTCACAA
AATCTATTTTTGAATGCTCAATTATACAGTATAATGCCTCATATAATTATTTGAACTGAAAAAG
AAGACATAGCCAGAGCTGACTTGACAATTGTTCACACTCAGAAAGTAAAATAACTAAGGCCAAA
GTGTTGAAGGGGGAAAGAACACCCAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATG
CCTTCCTAGTGCCCACTGTCACACAGGGACCCAGGACCGTAGAATCCAGAAGTGCTGCTTCCGG
TGGGTGCTTCATAGAACAGCCAGCAACCTACAGCAGACAGCAGAAAGCCTTGCTTTGAAACCAT
TCAGCACTTGAAAATCTGGGTCTACACACAACTGGCTAGCAAGCCTTATAAAGACTTAGCATGA
GTACCCAATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTTTGCACACTCTTC
CTCAGCCGACTCATGTTGGTAAGCAAGCCTGCAGACCGTCCCTTCTGGACTGATTTGTATAAGG
GGATTCATGGCCTGCAGTTACAAATAACAGGTTATGAGGTATGCTGGGGAAGCAGGCAGGAGAA
TCTCTGACTTTAAAAAGCACACGTTTCGAAAGGGCTACATATATCTCTCCATAAATGACCAGAG
CCATCTTTTGTAATTTGTAGCACTGTGCCCAGTAAACAGTTAAAATGCTTGGAACATTTTTGGC
TGTCCTTTTGATTGTCCATGTGAGCCAGTGCCCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCT
GTCCCACAGGGCCAGCCTCCAGCTAGTGCGCAGGAGCCTTGGGGAGAGCGGACACTACAGTCAC
CCAGCTTCCCCATCTGTTGTCCGTTGCTGCCACCGTGTGAATGGTGACCAGACCTCCCAGTGAG
GCTATGTTTACAACCCCACCTCACCAAATGCCAACTTCTGGCATTGGGATCAATGCCAAACTAT
CCCCAGATTCTGTTTAATCGTGGGAAAGAAAAGCATGGGCGTGTTCTGTTCCCTGCCAGCGTGG
TGCTTCTTGCCTCCTCTCTGGAAGGGCCTACACCAGCTCAGATGCACTCTCGGAGCCTTTCCAG
CAGGACCTTCAAGCTCTCTTACGCATCACTGTCCATCAGCCTCGGGTCCACCATCCTCACAAGG
AAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCTGAGGTCATCTCGGTGTAAATAAATAA
AAACGTGGACTGTCCTGATTCTGGATCAACCTCTGAAAAAGCCAACCTCTGGAAAGGGCTAAAT
GATAAGTATTTTAAAGTTTGTCACATCATGTTTTAAACTTTATCCAAATGTGTTGCTATCGCTT
CTATTGCAGCATGAAAAATAAAAGATATGTGAATGGG

hide sequence

RefSeq Acc Id:

XM_036158777 ⟹ XP_036014670

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	62,816,908 - 62,845,935 (+)	NCBI

Sequence:

show sequence

TGGAAAAGGGAATCCTTGTATTTCATCCTCTCCATATGTGGAACTAAACATCCCTCATGGATAT
TTTCCTACGTCTGTATGTCAGTCTTTCTTTCTCAATTACATGGTGTGGAGTTCCAAGAACAAGG
ATGAGCTACTGTTGTGCGTGAGTGTAAAGCATCCCCTACAGGTGCATGTGTTTGAACACTTGGT
TCCCATCTACTGACGACATTTTCTGAGATTGTGGGACCTTTAAGCCTGAGCTGTTTGCTGATCC
ACCACGATATGAGCAACCCCTCTCAAGCTCCAACCACCACATAACAGGAATCACTCTCCCTCTA
AGAACTCCAGCACACCTTCCTCAGCACGAGGAACTCTACCCTTACGGGTACGTGGGACAAGATA
AGTCTGGTCTCTGACAGTCATCCTGGAACAGTGATGGGAAGTGAGCTTTCTGTGGAGGAGGCAC
AGGACCCTTTCCTGGTGAGCATCCACATCATCGCAGACCCAGGGGAGTCACAGCCACTGCAGGA
GGCCATCGACAAGGTTTTGGCGTGGGTTCACCCTGATCTCCCACTGTTCCGAGTGTCTGAGAGG
CGCACAACCAGGCGAAGGCGGAAGTCTCCCAAGGGTGCACAGCCGGCGCTGGCGGTGGTGCTGT
TCCTACAGGAGGAGTACGGAGAGGAGCAGATCCTACAGGTACACAGGGTGCTGCAGCAGCCGCC
CTGGCGTCACCACCACACAGAGCGAGTGCATGGCCGCTTCATACCCTACCTGCCTTGCAGTCAG
GACTTCTTCACTCTGGCTCCCGGGACCCCACTGTGGGCAATCAGGCCGGTGCACTACGGCAAGG
AAATCGTGCGCTTCACCATCTACTGTCGCCATAACAGCTACACTGACAGCCTCCGCTTCTATGA
GCTGATCTTGCGCCGGAGCCCCAGCCAGCGGAAAGCAGACTTCTGCATCTTCCCCATTTTCTCC
AATCTGGATGTGGACATCCAGTTCTCCCTGAAAAGACTACCCTGCGACCAGAAGCCAGTGCCCA
CCGACTCCTCCGTGCTGGAGTTCCGAGTGAAGGACATCGGGCAACTGGTACCGCTCCTTCCCAA
CCCCTGCAGCCCCATCAGCGAGGGGCGCTGGCAGACTGAGGACCACGATGGCAACAAGATCCTT
CTGCAGGCACAGAGGACACACAAAAAGGCCCCCAAGTACAGCAGAGCACATCACTCCTCTGAGA
AGAAACCACATTCTGCTCCTCCTGCAGCGGTCGACACACCAAACACAGGACAGGGCAGCAGCCA
GACAGCCCTACATGACAGCCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTAT
AACACACAGTCGAGCACCTCCAGCCCTGCCTGGTCTTTCCCGAGAAGCAAGTCTTTGTTTTGTT
TGCCCAGTGGAGGCCCTTCCCCAACTGAACCACAGCCACTACCGACCAATTCCCAGAGACACAG
TGCATCGGAGTGGAAGCCTAGCCGCCTCATGTCCATTGATGACTTAGAAGGGGCCCAAGAGACA
GATGTGGACACAGGCCTGCGGCTGTCCTCCTCAGACCTGTCTGTGGTCTCTGCATATTCTGCAC
CCAGTAGGTTTTACAACACAATAGAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCC
AGCACACAAGAGTCCCAAGAAAGGACCTATGCCCGCTGCCAGTGAGGTAAGCCCAGACACTGCC
TGTGTTTCCCACCCTCTCTTCACCAAAGGGTCCCCCAGGCCTGCAGAGACAACTACTCCTGCTC
TCTCAGCTTCTGATGCCTCCTTGCTCACAGAGTCATCCACACACACCCCATGTCATGACCCCAA
AGCCACACAGGGTGTCCAAGGCATGCTATTGCCTCCAACAACAGTTGGTCCTGAGACTGATGAC
ATGGAGGAGTTCTACATCTGAGCGCATCTTGGCTTTCAGACAGACTCAGTCACAGAAACTCGGG
TACCACTGTGACCAGCTCTTTGTTCACAGGGTGCTCTCAGCCCCATTTGCCAGCTGACTAGAAC
TTAATTATCTGTCTTGGGAGACTGTTGGCATGTTGACCATGCCACCTATCCTTAGCTGACAGGT
GCCATATTTCTAGAGGTTCAGAAAAAGGAAGAAGGAGGAGGAGGAGGAAAAGGAGGAGCAGGAA
GAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGGAGAGGAGGAGGAGGAAGAGAAGGAGAAGA
AGAAGGAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAAACACCTGACATTTTTATGGAAATACAT
TTTCAACACACTTAGCTCACAAAATCTATTTTTGAATGCTCAATTATACAGTATAATGCCTCAT
ATAATTATTTGAACTGAAAAAGAAGACATAGCCAGAGCTGACTTGACAATTGTTCACACTCAGA
AAGTAAAATAACTAAGGCCAAAGTGTTGAAGGGGGAAAGAACACCCAGGGACTGGCCCCACGTC
AGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCCCACTGTCACACAGGGACCCAGGACCGTAG
AATCCAGAAGTGCTGCTTCCGGTGGGTGCTTCATAGAACAGCCAGCAACCTACAGCAGACAGCA
GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAACTGGCTAGCAA
GCCTTATAAAGACTTAGCATGAGTACCCAATGCCTTGCACACTTACAAAATACTCTGAGTATGA
AAGCTACCTTTGCACACTCTTCCTCAGCCGACTCATGTTGGTAAGCAAGCCTGCAGACCGTCCC
TTCTGGACTGATTTGTATAAGGGGATTCATGGCCTGCAGTTACAAATAACAGGTTATGAGGTAT
GCTGGGGAAGCAGGCAGGAGAATCTCTGACTTTAAAAAGCACACGTTTCGAAAGGGCTACATAT
ATCTCTCCATAAATGACCAGAGCCATCTTTTGTAATTTGTAGCACTGTGCCCAGTAAACAGTTA
AAATGCTTGGAACATTTTTGGCTGTCCTTTTGATTGTCCATGTGAGCCAGTGCCCCATGCCCCA
AAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCAGCTAGTGCGCAGGAGCCTTGG
GGAGAGCGGACACTACAGTCACCCAGCTTCCCCATCTGTTGTCCGTTGCTGCCACCGTGTGAAT
GGTGACCAGACCTCCCAGTGAGGCTATGTTTACAACCCCACCTCACCAAATGCCAACTTCTGGC
ATTGGGATCAATGCCAAACTATCCCCAGATTCTGTTTAATCGTGGGAAAGAAAAGCATGGGCGT
GTTCTGTTCCCTGCCAGCGTGGTGCTTCTTGCCTCCTCTCTGGAAGGGCCTACACCAGCTCAGA
TGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCATCACTGTCCATCAGCCT
CGGGTCCACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCTGAGG
TCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGATCAACCTCTGAAAAAGC
CAACCTCTGGAAAGGGCTAAATGATAAGTATTTTAAAGTTTGTCACATCATGTTTTAAACTTTA
TCCAAATGTGTTGCTATCGCTTCTATTGCAGCATGAAAAATAAAAGATATGTGAATGGGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001230786	(Get FASTA)	NCBI Sequence Viewer
	XP_036014670	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000047681
	ENSMUSP00000047681.8

RefSeq Acc Id:

NP_001230786 ⟸ NM_001243857

- UniProtKB:

D3Z5V4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNPKAGGEEEDCVDSGAETGGSDYSHLSSTSSELSVEEAQDPFLVSIHIIADPGESQPLQEAID
KVLAWVHPDLPLFRVSERRTTRRRRKSPKGAQPALAVVLFLQEEYGEEQILQVHRVLQQPPWRH
HHTERVHGRFIPYLPCSQDFFTLAPGTPLWAIRPVHYGKEIVRFTIYCRHNSYTDSLRFYELIL
RRSPSQRKADFCIFPIFSNLDVDIQFSLKRLPCDQKPVPTDSSVLEFRVKDIGQLVPLLPNPCS
PISEGRWQTEDHDGNKILLQAQRTHKKAPKYSRAHHSSEKKPHSAPPAAVDTPNTGQGSSQTAL
HDSPSNQIARLPGDKQEYNTQSSTSSPAWSFPRSKSLFCLPSGGPSPTEPQPLPTNSQRHSASE
WKPSRLMSIDDLEGAQETDVDTGLRLSSSDLSVVSAYSAPSRFYNTIEAPLSSERCSSHWPAHK
SPKKGPMPAASEVSPDTACVSHPLFTKGSPRPAETTTPALSASDASLLTESSTHTPCHDPKATQ
GVQGMLLPPTTVGPETDDMEEFYI

hide sequence

RefSeq Acc Id:

ENSMUSP00000047681 ⟸ ENSMUST00000039064

RefSeq Acc Id:	XP_036014670 ⟸ XM_036158777
- Peptide Label:	isoform X1

Protein Domains

FAM124

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3Z5V4-F1-model_v2	AlphaFold	D3Z5V4	1-536	view protein structure

Promoters

RGD ID:

8682664

Promoter ID:

EPDNEW_M19362

Type:

initiation region

Name:

Fam124a_1

Description:

Mus musculus family with sequence similarity 124, member A ,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	14	62,555,693 - 62,555,753	EPDNEW

RGD ID:

6824931

Promoter ID:

MM_KWN:17158

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain, Liver, Lung

Transcripts:

LINCRNA_344, XM_127791_FAM124A

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	14	63,174,289 - 63,174,789 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:3645930	AgrOrtholog
Ensembl Genes	ENSMUSG00000035184	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000039064	ENTREZGENE
	ENSMUST00000039064.8	UniProtKB/TrEMBL
InterPro	FAM124	UniProtKB/TrEMBL
	FAM124_dom	UniProtKB/TrEMBL
KEGG Report	mmu:629059	UniProtKB/TrEMBL
MGD	MGI:3645930	ENTREZGENE
NCBI Gene	629059	ENTREZGENE
PANTHER	PROTEIN FAM124A	UniProtKB/TrEMBL
	PTHR14715	UniProtKB/TrEMBL
Pfam	FAM124	UniProtKB/TrEMBL
PhenoGen	Fam124a	PhenoGen
UniProt	D3Z5V4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype