Abhd16a (abhydrolase domain containing 16A) - Rat Genome Database

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Gene: Abhd16a (abhydrolase domain containing 16A) Mus musculus
Analyze
Symbol: Abhd16a
Name: abhydrolase domain containing 16A
RGD ID: 1623843
MGI Page MGI
Description: Enables monoacylglycerol lipase activity and phospholipase activity. Involved in monoacylglycerol catabolic process; phosphatidylserine catabolic process; and prostaglandin catabolic process. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 86. Orthologous to human ABHD16A (abhydrolase domain containing 16A, phospholipase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: abhydrolase domain-containing protein 16A; AI326074; alpha/beta hydrolase domain-containing protein 16A; Bat; Bat-5; Bat5; D17H6S82; D17H6S82E; HLA-B associated transcript 5; HLA-B-associated transcript 5; mBAT5; MGC19234; monoacylglycerol lipase ABHD16A; NG2; NG26; phosphatidylserine lipase ABHD16A; withdrawn, = Bat5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,308,210 - 35,321,963 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,308,239 - 35,321,963 (+)EnsemblGRCm39 Ensembl
GRCm381735,089,234 - 35,102,987 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1735,089,263 - 35,102,987 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,226,236 - 35,239,932 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,697,347 - 34,711,043 (+)NCBIMGSCv36mm8
Celera1738,185,979 - 38,199,670 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.59NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1351875   PMID:7993390   PMID:8097912   PMID:8102126   PMID:8919359   PMID:9021146   PMID:9196000   PMID:9551980   PMID:10469308   PMID:10871872   PMID:12477932   PMID:14610273  
PMID:14656967   PMID:15489334   PMID:15782199   PMID:21267068   PMID:21677750   PMID:21873635   PMID:25290914   PMID:25580854   PMID:27480124   PMID:30550785   PMID:32325033   PMID:32462874  
PMID:38355793  


Genomics

Comparative Map Data
Abhd16a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,308,210 - 35,321,963 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,308,239 - 35,321,963 (+)EnsemblGRCm39 Ensembl
GRCm381735,089,234 - 35,102,987 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1735,089,263 - 35,102,987 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,226,236 - 35,239,932 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,697,347 - 34,711,043 (+)NCBIMGSCv36mm8
Celera1738,185,979 - 38,199,670 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.59NCBI
ABHD16A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38631,686,955 - 31,703,324 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl631,686,955 - 31,703,356 (-)EnsemblGRCh38hg38GRCh38
GRCh37631,654,732 - 31,671,101 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,762,715 - 31,779,067 (-)NCBINCBI36Build 36hg18NCBI36
Build 34631,762,714 - 31,779,067NCBI
Celera633,252,945 - 33,269,362 (-)NCBICelera
Cytogenetic Map6p21.33NCBI
HuRef631,440,951 - 31,457,370 (-)NCBIHuRef
CHM1_1631,656,862 - 31,673,273 (-)NCBICHM1_1
T2T-CHM13v2.0631,539,989 - 31,556,359 (-)NCBIT2T-CHM13v2.0
Abhd16a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8203,723,756 - 3,738,617 (-)NCBIGRCr8
mRatBN7.2203,719,089 - 3,733,952 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl203,719,091 - 3,733,927 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx204,418,104 - 4,433,262 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0203,780,160 - 3,795,318 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0204,318,217 - 4,333,175 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0205,080,070 - 5,094,935 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,080,070 - 5,094,935 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,153,000 - 7,168,193 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,782,759 - 3,797,620 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1203,782,984 - 3,797,821 (-)NCBI
Celera204,291,911 - 4,306,777 (+)NCBICelera
Cytogenetic Map20p12NCBI
Abhd16a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955437227,407 - 241,830 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955437227,407 - 241,702 (-)NCBIChiLan1.0ChiLan1.0
ABHD16A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2546,164,503 - 46,180,725 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1642,126,016 - 42,142,219 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,348,640 - 31,364,777 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,238,872 - 32,253,856 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl632,238,872 - 32,253,856 (-)Ensemblpanpan1.1panPan2
ABHD16A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,167,723 - 1,182,520 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl121,167,721 - 1,182,453 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,304,284 - 1,319,089 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0121,313,091 - 1,327,889 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl121,313,089 - 1,328,210 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1121,172,393 - 1,187,217 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,239,568 - 1,254,388 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,306,774 - 1,321,843 (-)NCBIUU_Cfam_GSD_1.0
Abhd16a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494635,716,402 - 35,732,375 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367271,828,905 - 1,844,967 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367271,828,966 - 1,843,334 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABHD16A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl723,800,936 - 23,814,947 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1723,800,932 - 23,814,920 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2727,448,853 - 27,451,015 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ABHD16A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11740,320,749 - 40,336,922 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1740,320,878 - 40,336,720 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604431,598,745 - 31,614,930 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Abhd16a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475424,505,606 - 24,520,092 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475424,505,572 - 24,520,092 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1920
Count of miRNA genes:720
Interacting mature miRNAs:923
Transcripts:ENSMUST00000007251, ENSMUST00000172584, ENSMUST00000173134, ENSMUST00000173190, ENSMUST00000173247, ENSMUST00000173579, ENSMUST00000173846
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173517581770165926Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
AI326074  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381735,102,296 - 35,102,498UniSTSGRCm38
MGSCv371735,239,241 - 35,239,443UniSTSGRCm37
Celera1738,198,979 - 38,199,181UniSTS
Cytogenetic Map17B1UniSTS
cM Map1719.01UniSTS
Whitehead/MRC_RH17467.89UniSTS
RH138896  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381735,094,963 - 35,095,081UniSTSGRCm38
MGSCv371735,231,908 - 35,232,026UniSTSGRCm37
Celera1738,191,642 - 38,191,760UniSTS
Cytogenetic Map17B1UniSTS
cM Map1719.01UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001410340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001417679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_177060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_177061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_184561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004939480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC087117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF109905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU406961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU466548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000007251   ⟹   ENSMUSP00000007251
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,308,267 - 35,321,963 (+)Ensembl
GRCm38.p6 Ensembl1735,089,291 - 35,102,987 (+)Ensembl
Ensembl Acc Id: ENSMUST00000172584
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,315,328 - 35,319,916 (+)Ensembl
GRCm38.p6 Ensembl1735,096,352 - 35,100,940 (+)Ensembl
Ensembl Acc Id: ENSMUST00000173134
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,308,239 - 35,310,802 (+)Ensembl
GRCm38.p6 Ensembl1735,089,263 - 35,091,826 (+)Ensembl
Ensembl Acc Id: ENSMUST00000173190
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,308,846 - 35,310,942 (+)Ensembl
GRCm38.p6 Ensembl1735,089,870 - 35,091,966 (+)Ensembl
Ensembl Acc Id: ENSMUST00000173247
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,319,830 - 35,321,006 (+)Ensembl
GRCm38.p6 Ensembl1735,100,854 - 35,102,030 (+)Ensembl
Ensembl Acc Id: ENSMUST00000173579
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,318,907 - 35,319,671 (+)Ensembl
GRCm38.p6 Ensembl1735,099,931 - 35,100,695 (+)Ensembl
Ensembl Acc Id: ENSMUST00000173846   ⟹   ENSMUSP00000133505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,308,290 - 35,321,932 (+)Ensembl
GRCm38.p6 Ensembl1735,089,314 - 35,102,956 (+)Ensembl
RefSeq Acc Id: NM_001410340   ⟹   NP_001397269
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_001410341   ⟹   NP_001397270
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_001410342   ⟹   NP_001397271
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_001410343   ⟹   NP_001397272
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_001410345   ⟹   NP_001397274
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_001410346   ⟹   NP_001397275
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_001410347   ⟹   NP_001397276
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_001417679   ⟹   NP_001404608
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NM_178592   ⟹   NP_848707
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
GRCm381735,089,291 - 35,102,987 (+)NCBI
MGSCv371735,226,236 - 35,239,932 (+)RGD
Celera1738,185,979 - 38,199,670 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_177060
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NR_177061
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: NR_184561
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,269 - 35,321,963 (+)NCBI
RefSeq Acc Id: XR_004939480
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,308,210 - 35,321,189 (+)NCBI
Sequence:
RefSeq Acc Id: NP_848707   ⟸   NM_178592
- Peptide Label: isoform 1
- UniProtKB: Q9Z1Q2 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000007251   ⟸   ENSMUST00000007251
Ensembl Acc Id: ENSMUSP00000133505   ⟸   ENSMUST00000173846
RefSeq Acc Id: NP_001397276   ⟸   NM_001410347
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001397274   ⟸   NM_001410345
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001397275   ⟸   NM_001410346
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001404608   ⟸   NM_001417679
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001397272   ⟸   NM_001410343
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001397271   ⟸   NM_001410342
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001397270   ⟸   NM_001410341
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001397269   ⟸   NM_001410340
- Peptide Label: isoform 2
Protein Domains
AB hydrolase-1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z1Q2-F1-model_v2 AlphaFold Q9Z1Q2 1-558 view protein structure

Promoters
RGD ID:13675806
Promoter ID:EPDNEW_M22052
Type:initiation region
Name:Abhd16a_1
Description:Mus musculus abhydrolase domain containing 16A , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381735,089,293 - 35,089,353EPDNEW
RGD ID:6827865
Promoter ID:MM_KWN:23270
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_178592
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,225,949 - 35,226,449 (+)MPROMDB
RGD ID:6849070
Promoter ID:MM_XEF:3135
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain
Transcripts:NM_001006773,   NM_001087184,   NM_001093525
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,227,101 - 35,227,601 (+)MPROMDB
RGD ID:6847380
Promoter ID:MM_ACW:22581
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Lung
Transcripts:BAT5.ISEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,238,406 - 35,239,622 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:99476 AgrOrtholog
Ensembl Genes ENSMUSG00000007036 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000007251 ENTREZGENE
  ENSMUST00000007251.14 UniProtKB/Swiss-Prot
  ENSMUST00000173846 ENTREZGENE
  ENSMUST00000173846.8 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot
InterPro AB_hydrolase UniProtKB/Swiss-Prot
  AB_hydrolase_1 UniProtKB/Swiss-Prot
KEGG Report mmu:193742 UniProtKB/Swiss-Prot
MGD MGI:99476 ENTREZGENE
NCBI Gene Abhd16a ENTREZGENE
PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot
  PTHR12277:SF54 UniProtKB/Swiss-Prot
Pfam ABHD16_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Abhydrolase_1 UniProtKB/Swiss-Prot
PhenoGen Abhd16a PhenoGen
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot
UniProt ABHGA_MOUSE UniProtKB/Swiss-Prot
  G3UX11_MOUSE UniProtKB/TrEMBL
  Q9Z1Q2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Abhd16a  abhydrolase domain containing 16A  Bat5  HLA-B associated transcript 5  Symbol and/or name change 5135510 APPROVED
2024-08-21 Bat5  HLA-B associated transcript 5  Bat-5  withdrawn, = Bat5  Symbol and/or name change 5135510 APPROVED
2024-08-21 Bat-5  withdrawn, = Bat5  Abhd16a  abhydrolase domain containing 16A  Symbol and/or name change 5135510 APPROVED
2011-07-27 Abhd16a  abhydrolase domain containing 16A  Bat5  HLA-B associated transcript 5  Symbol and/or name change 5135510 APPROVED