Cox18 (cytochrome c oxidase assembly protein 18) - Rat Genome Database

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Gene: Cox18 (cytochrome c oxidase assembly protein 18) Mus musculus
Analyze
Symbol: Cox18
Name: cytochrome c oxidase assembly protein 18
RGD ID: 1623782
MGI Page MGI
Description: Predicted to enable membrane insertase activity. Predicted to be involved in mitochondrial cytochrome c oxidase assembly and protein insertion into mitochondrial inner membrane from matrix. Located in mitochondrion. Orthologous to human COX18 (cytochrome c oxidase assembly factor COX18).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC038311; COX18 cytochrome c oxidase assembly homolog; cytochrome c oxidase assembly protein COX18, mitochondrial; mitochondrial inner membrane protein COX18
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39590,362,583 - 90,371,828 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl590,362,583 - 90,371,860 (-)EnsemblGRCm39 Ensembl
GRCm38590,214,724 - 90,224,595 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl590,214,724 - 90,224,001 (-)EnsemblGRCm38mm10GRCm38
MGSCv37590,643,749 - 90,653,021 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36591,289,927 - 91,299,163 (-)NCBIMGSCv36mm8
Celera588,372,990 - 88,382,260 (-)NCBICelera
Cytogenetic Map5E1NCBI
cM Map544.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:17015433   PMID:18614015   PMID:21267068   PMID:21873635  


Genomics

Comparative Map Data
Cox18
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39590,362,583 - 90,371,828 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl590,362,583 - 90,371,860 (-)EnsemblGRCm39 Ensembl
GRCm38590,214,724 - 90,224,595 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl590,214,724 - 90,224,001 (-)EnsemblGRCm38mm10GRCm38
MGSCv37590,643,749 - 90,653,021 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36591,289,927 - 91,299,163 (-)NCBIMGSCv36mm8
Celera588,372,990 - 88,382,260 (-)NCBICelera
Cytogenetic Map5E1NCBI
cM Map544.32NCBI
COX18
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38473,052,362 - 73,069,759 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl473,052,362 - 73,069,755 (-)EnsemblGRCh38hg38GRCh38
GRCh37473,918,079 - 73,935,476 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36474,139,280 - 74,154,336 (-)NCBINCBI36Build 36hg18NCBI36
Celera471,276,493 - 71,291,542 (-)NCBICelera
Cytogenetic Map4q13.3NCBI
HuRef469,726,856 - 69,741,911 (-)NCBIHuRef
CHM1_1473,956,246 - 73,971,331 (-)NCBICHM1_1
T2T-CHM13v2.0476,395,977 - 76,413,374 (-)NCBIT2T-CHM13v2.0
Cox18
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81418,147,558 - 18,161,622 (+)NCBIGRCr8
mRatBN7.21417,864,581 - 17,877,483 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1417,865,857 - 17,877,480 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1417,850,483 - 17,862,114 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01419,169,393 - 19,181,024 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01417,869,278 - 17,880,900 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01419,434,728 - 19,446,379 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1419,434,753 - 19,446,376 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01419,340,296 - 19,352,710 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41419,390,299 - 19,401,922 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1417,231,119 - 17,242,742 (+)NCBICelera
Cytogenetic Map14p22NCBI
LOC102025739
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955447382,679 - 390,037 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955447382,631 - 390,399 (+)NCBIChiLan1.0ChiLan1.0
LOC100993710
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2356,996,709 - 57,019,325 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1457,185,224 - 57,198,554 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0451,128,391 - 51,142,068 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1457,445,821 - 57,459,207 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl457,445,838 - 57,459,207 (+)Ensemblpanpan1.1panPan2
COX18
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11361,875,507 - 61,888,068 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1361,877,194 - 61,888,387 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1361,544,008 - 61,557,463 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01362,684,228 - 62,697,511 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1362,686,601 - 62,697,847 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11362,293,197 - 62,306,657 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01361,782,057 - 61,795,539 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01362,934,159 - 62,947,369 (-)NCBIUU_Cfam_GSD_1.0
LOC101967120
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528513,891,694 - 13,904,530 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365982,343,574 - 2,357,019 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365982,343,103 - 2,354,226 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COX18
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl869,341,198 - 69,354,894 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1869,274,420 - 69,354,969 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2873,274,303 - 73,356,361 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103235773
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1721,518,962 - 21,531,585 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl721,517,527 - 21,531,661 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660841,266,757 - 1,279,735 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101726570
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473534,532,847 - 34,541,511 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473534,532,911 - 34,542,833 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cox18
183 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:575
Count of miRNA genes:334
Interacting mature miRNAs:372
Transcripts:ENSMUST00000048363, ENSMUST00000118816, ENSMUST00000131068, ENSMUST00000133905, ENSMUST00000144898, ENSMUST00000148480
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11040589Lmr3a_mleishmaniasis resistance 3a (mouse)55960280193602980Mouse
11040590Lmr3b_mleishmaniasis resistance 3b (mouse)55960280193602980Mouse
10043993Hbnr10_mHeligmosomoides bakeri nematode resistance 10 (mouse)Not determined572418876106419011Mouse
10755524Mono1_mmonocyte differential 1 (mouse)580849259114849259Mouse
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
13464249Ahl16_mage related hearing loss, early onset 16 (mouse)576445064110445225Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
11040591Lmr3c_mleishmaniasis resistance 3c (mouse)55960280193602980Mouse
1300986Hdlq2_mHDL QTL 2 (mouse)Not determined576280786110280917Mouse
10401246Bglu13_mblood glucose level 13 (mouse)Not determined579539640113539786Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582838468116838597Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
4141438Skmw13_mskeletal muscle weight 13 (mouse)Not determined576190263110190479Mouse
1301713Dbsty2_mdiabesity 2 (mouse)Not determined576445064110445225Mouse
12910784Pwgrq15_mpost-weaning growth rate QTL 15 (mouse)57717582397658215Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
1301419Cypr3_mcytokine production 3 (mouse)Not determined581019649115019803Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
13464247Ahl14_mage related hearing loss, early onset 14 (mouse)56040306294403160Mouse
11252124Modvl6_mmodifier of vacuolated lens 6 (mouse)56265056896650688Mouse
4142428Modvl1_mmodifier of vacuolated lens 1 (mouse)Not determined6265056896650688Mouse
13464250Ahl15_mage related hearing loss, early onset 15 (mouse)56265056896650688Mouse
11049560Lmr24d_mleishmaniasis resistance 24d (mouse)56437487798374996Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575315348120018629Mouse
1301691Cdcs10_mcytokine deficiency colitis susceptibility 10 (mouse)Not determined576280786110280917Mouse
1300931Cocrb6_mcocaine related behavior 6 (mouse)Not determined576445064110445225Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
4141124Dshv2_mdorsal hippocampal volume 2 (mouse)Not determined57531534898019803Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582838468116838597Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
10044005Ahl7_mage related hearing loss 7 (mouse)Not determined55833050292330641Mouse
11040592Lmr3d_mleishmaniasis resistance 3d (mouse)55960280193602980Mouse
1301829Thyls2_mthymic lymphoma susceptibility 2 (mouse)Not determined576445064110445225Mouse
12910816Ogrq2_moverall growth rate QTL 2 (mouse)57717582397658215Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
12904739M2fscn2_mmodifier 2 of FSCN2 (mouse)566529661100529661Mouse
12904740M1fscn2_mmodifier 1 of Fscn2 (mouse)566529661100529661Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
4141505Chlq14_mcirculating hormone level QTL 14 (mouse)Not determined576280786110280917Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001033310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_028088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC162171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC138972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE690958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ085333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX225681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DN174415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV661727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000048363   ⟹   ENSMUSP00000044144
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl590,362,583 - 90,371,860 (-)Ensembl
GRCm38.p6 Ensembl590,214,724 - 90,224,001 (-)Ensembl
RefSeq Acc Id: ENSMUST00000118816   ⟹   ENSMUSP00000113353
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl590,362,583 - 90,371,831 (-)Ensembl
GRCm38.p6 Ensembl590,214,724 - 90,223,972 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131068
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl590,365,393 - 90,367,650 (-)Ensembl
GRCm38.p6 Ensembl590,217,534 - 90,219,791 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133905
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl590,362,586 - 90,363,440 (-)Ensembl
GRCm38.p6 Ensembl590,214,727 - 90,215,581 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl590,362,586 - 90,365,738 (-)Ensembl
GRCm38.p6 Ensembl590,214,727 - 90,217,879 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148480   ⟹   ENSMUSP00000116430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl590,366,794 - 90,371,798 (-)Ensembl
GRCm38.p6 Ensembl590,218,935 - 90,223,939 (-)Ensembl
RefSeq Acc Id: ENSMUST00000200475
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl590,362,589 - 90,363,881 (-)Ensembl
GRCm38.p6 Ensembl590,214,730 - 90,216,022 (-)Ensembl
RefSeq Acc Id: NM_001033310   ⟹   NP_001028482
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39590,362,583 - 90,371,828 (-)NCBI
GRCm38590,214,724 - 90,223,996 (-)ENTREZGENE
MGSCv37590,643,749 - 90,653,021 (-)RGD
Celera588,372,990 - 88,382,260 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163456   ⟹   NP_001156928
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39590,362,583 - 90,371,828 (-)NCBI
GRCm38590,214,724 - 90,223,996 (-)ENTREZGENE
MGSCv37590,643,749 - 90,653,021 (-)RGD
Celera588,372,990 - 88,382,260 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_028088
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39590,362,583 - 90,371,828 (-)NCBI
GRCm38590,214,724 - 90,223,996 (-)ENTREZGENE
MGSCv37590,643,749 - 90,653,021 (-)RGD
Celera588,372,990 - 88,382,260 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_189627
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39590,362,583 - 90,371,828 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001028482   ⟸   NM_001033310
- Peptide Label: isoform 2
- UniProtKB: G3X965 (UniProtKB/Swiss-Prot),   A6H626 (UniProtKB/Swiss-Prot),   Q3U1D5 (UniProtKB/Swiss-Prot),   Q8VC74 (UniProtKB/Swiss-Prot),   B7ZNW4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156928   ⟸   NM_001163456
- Peptide Label: isoform 1
- UniProtKB: G5E8U6 (UniProtKB/TrEMBL),   B7ZNW4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000113353   ⟸   ENSMUST00000118816
RefSeq Acc Id: ENSMUSP00000044144   ⟸   ENSMUST00000048363
RefSeq Acc Id: ENSMUSP00000116430   ⟸   ENSMUST00000148480
Protein Domains
Membrane insertase YidC/Oxa/ALB C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VC74-F1-model_v2 AlphaFold Q8VC74 1-331 view protein structure

Promoters
RGD ID:6887102
Promoter ID:EPDNEW_M7002
Type:initiation region
Name:Cox18_1
Description:Mus musculus cytochrome c oxidase assembly protein 18 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38590,223,969 - 90,224,029EPDNEW
RGD ID:6837299
Promoter ID:MM_KWN:42824
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain
Transcripts:OTTMUST00000068952
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36590,644,911 - 90,645,467 (-)MPROMDB
RGD ID:6837300
Promoter ID:MM_KWN:42825
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour
Transcripts:OTTMUST00000068951
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36590,646,416 - 90,647,067 (-)MPROMDB
RGD ID:6837297
Promoter ID:MM_KWN:42826
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour
Transcripts:OTTMUST00000068950
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36590,648,666 - 90,649,417 (-)MPROMDB
RGD ID:6837296
Promoter ID:MM_KWN:42827
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000118816,   NR_028088_COX18,   OTTMUST00000068947,   OTTMUST00000068949
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36590,652,591 - 90,653,287 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2448532 AgrOrtholog
Ensembl Genes ENSMUSG00000035505 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000048363 ENTREZGENE
  ENSMUST00000048363.10 UniProtKB/Swiss-Prot
  ENSMUST00000118816 ENTREZGENE
  ENSMUST00000118816.6 UniProtKB/TrEMBL
  ENSMUST00000148480.2 UniProtKB/TrEMBL
InterPro YidC/ALB3/OXA1/COX18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  YidC/Oxa/ALB_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:231430 UniProtKB/Swiss-Prot
MGD MGI:2448532 ENTREZGENE
NCBI Gene 231430 ENTREZGENE
PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX18, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12428 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 60KD_IMP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cox18 PhenoGen
UniProt A6H626 ENTREZGENE
  B7ZNW4 ENTREZGENE, UniProtKB/TrEMBL
  COX18_MOUSE UniProtKB/Swiss-Prot
  D6RHB9_MOUSE UniProtKB/TrEMBL
  G3X965 ENTREZGENE
  G5E8U6 ENTREZGENE, UniProtKB/TrEMBL
  Q3U1D5 ENTREZGENE
  Q8VC74 ENTREZGENE
UniProt Secondary A6H626 UniProtKB/Swiss-Prot
  G3X965 UniProtKB/Swiss-Prot
  Q3U1D5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-11-27 Cox18  cytochrome c oxidase assembly protein 18    COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED