Dcpp1 (demilune cell and parotid protein 1) - Rat Genome Database

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Gene: Dcpp1 (demilune cell and parotid protein 1) Mus musculus
Analyze
No known orthologs.
Symbol: Dcpp1
Name: demilune cell and parotid protein 1
RGD ID: 1623313
MGI Page MGI
Description: Acts upstream of or within blastocyst development. Located in extracellular space. Is expressed in several structures, including blastocyst; early embryo; lymph node; oviduct; and submandibular gland primordium.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC005655; C86550; common salivary protein 1; Dc; Dcpp; Dcpp-1; demilune cell and parotid protein; MGC102440; MGC11676; p2; p20
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391724,099,643 - 24,101,827 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1724,099,850 - 24,101,827 (+)EnsemblGRCm39 Ensembl
GRCm381723,880,669 - 23,882,853 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1723,880,876 - 23,882,853 (+)EnsemblGRCm38mm10GRCm38
MGSCv371724,017,843 - 24,019,820 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361723,608,498 - 23,610,474 (+)NCBIMGSCv36mm8
Celera1724,380,457 - 24,382,427 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
extracellular space  (IBA,IDA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7717881   PMID:10725249   PMID:10922068   PMID:12466851   PMID:12477932   PMID:15186480   PMID:16239302   PMID:16954406   PMID:18374910   PMID:18572159   PMID:21267068   PMID:21873635  
PMID:22008794   PMID:26751783   PMID:28988106   PMID:37196063   PMID:37838739  


Genomics

Variants

.
Variants in Dcpp1
36 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:65
Count of miRNA genes:65
Interacting mature miRNAs:65
Transcripts:ENSMUST00000068580
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141608Phl1_mprogressive hearing loss 1 (mouse)Not determined17787584329487423Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
4142507Obrq13_mobesity resistance QTL 13 (mouse)Not determined1219832925076769Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
1558807Ceat1_mchronic experimental autoimmune thyroiditis 1 (mouse)Not determined171263668226401133Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302038Radpf1_mradiation pulmonary fibrosis 1 (mouse)Not determined171683545533819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
12910769Rtmq1_mrenal tumor modifier QTL 1 (mouse)172290003625721472Mouse

Markers in Region
C86550  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A3.3UniSTS
Dcpp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A3.3UniSTS
cM Map1710.0UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000068580   ⟹   ENSMUSP00000064663
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1724,099,850 - 24,101,827 (+)Ensembl
GRCm38.p6 Ensembl1723,880,876 - 23,882,853 (+)Ensembl
RefSeq Acc Id: NM_001410030   ⟹   NP_001396959
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391724,099,852 - 24,101,827 (+)NCBI
RefSeq Acc Id: NM_019910   ⟹   NP_064294
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391724,099,852 - 24,101,827 (+)NCBI
GRCm381723,880,876 - 23,882,853 (+)NCBI
MGSCv371724,017,843 - 24,019,820 (+)RGD
Celera1724,380,457 - 24,382,427 (+)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017317222   ⟹   XP_017172711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391724,099,643 - 24,101,827 (+)NCBI
GRCm381723,880,669 - 23,882,853 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_064294   ⟸   NM_019910
- Peptide Label: precursor
- UniProtKB: L7N1X9 (UniProtKB/TrEMBL),   Q99JV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017172711   ⟸   XM_017317222
- Peptide Label: isoform X1
- UniProtKB: Q99JV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000064663   ⟸   ENSMUST00000068580
RefSeq Acc Id: NP_001396959   ⟸   NM_001410030
- Peptide Label: precursor
- UniProtKB: L7N1X9 (UniProtKB/TrEMBL)
Protein Domains
Jacalin-type lectin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-L7N1X9-F1-model_v2 AlphaFold L7N1X9 1-171 view protein structure

Promoters
RGD ID:13674972
Promoter ID:EPDNEW_M21635
Type:single initiation site
Name:Dcpp1_1
Description:Mus musculus demilune cell and parotid protein 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381723,880,880 - 23,880,940EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:105949 AgrOrtholog
Ensembl Genes ENSMUSG00000096445 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000068580 ENTREZGENE
  ENSMUST00000068580.4 UniProtKB/TrEMBL
Gene3D-CATH 2.100.10.30 UniProtKB/TrEMBL
InterPro Jacalin-like_lectin_dom_sf UniProtKB/TrEMBL
  Mannose-bd_lectin UniProtKB/TrEMBL
MGD MGI:105949 ENTREZGENE
NCBI Gene 13184 ENTREZGENE
PANTHER OS11G0524900 PROTEIN UniProtKB/TrEMBL
  ZYMOGEN GRANULE PROTEIN 16 HOMOLOG B UniProtKB/TrEMBL
Pfam Jacalin UniProtKB/TrEMBL
PhenoGen Dcpp1 PhenoGen
PROSITE JACALIN_LECTIN UniProtKB/TrEMBL
SMART Jacalin UniProtKB/TrEMBL
Superfamily-SCOP Mannose-bd_lectin UniProtKB/TrEMBL
UniProt L7N1X9 ENTREZGENE, UniProtKB/TrEMBL
  Q60601_MOUSE UniProtKB/TrEMBL
  Q64097_MOUSE UniProtKB/TrEMBL
  Q99JV1 ENTREZGENE, UniProtKB/TrEMBL