B4galnt2 (beta-1,4-N-acetyl-galactosaminyl transferase 2) - Rat Genome Database

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Gene: B4galnt2 (beta-1,4-N-acetyl-galactosaminyl transferase 2) Mus musculus
Analyze
Symbol: B4galnt2
Name: beta-1,4-N-acetyl-galactosaminyl transferase 2
RGD ID: 1623312
MGI Page MGI
Description: Predicted to enable acetylgalactosaminyltransferase activity. Acts upstream of or within several processes, including UDP-N-acetylglucosamine metabolic process; protein import; and skeletal muscle fiber differentiation. Predicted to be located in Golgi membrane. Is expressed in bladder fundus; hindgut; and midgut. Orthologous to human B4GALNT2 (beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI593864; beta-1,4 N-acetylgalactosaminyltransferase 2; CT-Gal NAc transferase; Dlb; Dlb-; Dlb-1; Dlb1; dolichos lectin binding 1; Galg; Galg2; Galgt2; Ggm3; Igf2bp1; N-acetylgalactosaminyltransferase; UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneura minyl)-galactosyl-N-acetylglucosaminylpolypeptide-beta-1, 4-N-acetylgalactosaminyltransferase; UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)-galactosyl-N-acetylglucosaminylpolypeptide-beta-1, 4-N-acetylgalactosaminyltransferase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391195,754,385 - 95,805,786 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1195,756,769 - 95,805,717 (-)EnsemblGRCm39 Ensembl
GRCm381195,863,559 - 95,914,960 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1195,865,943 - 95,914,891 (-)EnsemblGRCm38mm10GRCm38
MGSCv371195,724,873 - 95,776,185 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361195,682,111 - 95,730,961 (-)NCBIMGSCv36mm8
Celera11105,505,852 - 105,557,155 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1159.02NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1969921   PMID:2563351   PMID:2882472   PMID:2903254   PMID:2963822   PMID:3459253   PMID:3710158   PMID:4031755   PMID:7515051   PMID:7533893   PMID:8137279   PMID:8223513  
PMID:8482578   PMID:8524785   PMID:9098403   PMID:9806826   PMID:9989502   PMID:10097137   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:11585736  
PMID:11795940   PMID:11960016   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14688233   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17591965   PMID:18799693   PMID:19086062  
PMID:19088380   PMID:19109526   PMID:19498002   PMID:21267068   PMID:21481371   PMID:21652612   PMID:21677750   PMID:21873635   PMID:22278669   PMID:22308317   PMID:22401809   PMID:22775139  
PMID:22982027   PMID:23118208   PMID:25652401   PMID:26133982   PMID:26435413   PMID:27561302   PMID:28806915   PMID:31036568   PMID:34581784  


Genomics

Comparative Map Data
B4galnt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391195,754,385 - 95,805,786 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1195,756,769 - 95,805,717 (-)EnsemblGRCm39 Ensembl
GRCm381195,863,559 - 95,914,960 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1195,865,943 - 95,914,891 (-)EnsemblGRCm38mm10GRCm38
MGSCv371195,724,873 - 95,776,185 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361195,682,111 - 95,730,961 (-)NCBIMGSCv36mm8
Celera11105,505,852 - 105,557,155 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1159.02NCBI
B4GALNT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381749,120,344 - 49,176,840 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1749,132,460 - 49,176,840 (+)EnsemblGRCh38hg38GRCh38
GRCh371747,209,822 - 47,254,202 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361744,565,328 - 44,602,121 (+)NCBINCBI36Build 36hg18NCBI36
Build 341744,565,327 - 44,602,121NCBI
Celera1743,663,814 - 43,701,663 (+)NCBICelera
Cytogenetic Map17q21.32NCBI
HuRef1742,576,845 - 42,614,051 (+)NCBIHuRef
CHM1_11747,275,424 - 47,312,625 (+)NCBICHM1_1
T2T-CHM13v2.01749,983,750 - 50,039,929 (+)NCBIT2T-CHM13v2.0
B4galnt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81081,298,338 - 81,324,738 (-)NCBIGRCr8
mRatBN7.21080,801,594 - 80,828,005 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1080,802,941 - 80,857,700 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01083,677,768 - 83,701,487 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01083,481,284 - 83,506,482 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1079,571,219 - 79,627,296 (-)NCBICelera
Cytogenetic Map10q26NCBI
B4galnt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545112,259,949 - 12,279,815 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545112,260,885 - 12,281,301 (-)NCBIChiLan1.0ChiLan1.0
B4GALNT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21915,995,941 - 16,025,950 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11717,962,001 - 17,992,016 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0178,432,636 - 8,460,533 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1178,414,549 - 8,442,034 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl178,414,549 - 8,442,036 (-)Ensemblpanpan1.1panPan2
B4GALNT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1925,314,845 - 25,344,644 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl925,294,223 - 25,344,382 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha924,777,866 - 24,805,610 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0926,090,187 - 26,142,032 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl926,090,288 - 26,141,880 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1924,858,766 - 24,909,924 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0925,117,444 - 25,169,101 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0925,246,386 - 25,297,787 (+)NCBIUU_Cfam_GSD_1.0
B4galnt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560224,721,726 - 24,757,938 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649012,317,496 - 12,341,671 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649012,317,483 - 12,342,934 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
B4GALNT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11225,368,234 - 25,410,021 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21225,306,402 - 25,352,263 (-)NCBISscrofa10.2Sscrofa10.2susScr3
B4GALNT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11669,538,167 - 69,575,416 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1669,538,504 - 69,574,419 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607740,643,084 - 40,682,484 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
B4galnt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247955,412,484 - 5,436,448 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247955,412,505 - 5,436,295 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in B4galnt2
1787 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:64
Count of miRNA genes:63
Interacting mature miRNAs:63
Transcripts:ENSMUST00000038343
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117757387399377820Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179813759104502698Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1180890826101890826Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
15092049Wsigrme3_mweek six growth rate, maternal effect 3 (mouse)118487732496629512Mouse
15092057Lgrme3_mlate growth rate, maternal effect 3 (mouse)118487732496629512Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse
1357631Motr1_mmodifier of tubby retinal degeneration 1 (mouse)Not determined1187691198103274115Mouse
1301491Abbp4_mA/J and C57BL/6 blood pressure 4 (mouse)Not determined118869958899081597Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
13524529Bodwtq10_mbody wweight QTL 10 (mouse)119067951297699512Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1192939373112544554Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
1300847Par1_mpulmonary adenoma resistance 1 (mouse)Not determined119406377996167421Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
4141086Mvwf_mmodifier of von Willebrand factor (mouse)Not determined9545964496176602Mouse

Markers in Region
G38029  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381195,864,274 - 95,864,407UniSTSGRCm38
MGSCv371195,725,588 - 95,725,721UniSTSGRCm37
Celera11105,506,567 - 105,506,700UniSTS
Cytogenetic Map11DUniSTS
cM Map1155.7UniSTS
G38030  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381195,913,267 - 95,913,540UniSTSGRCm38
MGSCv371195,774,581 - 95,774,854UniSTSGRCm37
Celera11105,555,554 - 105,555,827UniSTS
Cytogenetic Map11DUniSTS
cM Map1155.7UniSTS
AI593864  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381195,863,815 - 95,863,908UniSTSGRCm38
MGSCv371195,725,129 - 95,725,222UniSTSGRCm37
Celera11105,506,108 - 105,506,201UniSTS
Cytogenetic Map11DUniSTS
cM Map1155.7UniSTS
Whitehead/MRC_RH111245.42UniSTS
Galgt2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381195,866,926 - 95,868,373UniSTSGRCm38
MGSCv371195,728,240 - 95,729,687UniSTSGRCm37
Celera11105,509,219 - 105,510,666UniSTS
Cytogenetic Map11DUniSTS
cM Map1155.7UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_008081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF067829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL593858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL606704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AQ010449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AQ010450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AQ010451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF372924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JN128460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JN128461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JN128462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JN128463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JN128464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L30104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000038343   ⟹   ENSMUSP00000037239
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1195,756,769 - 95,805,717 (-)Ensembl
GRCm38.p6 Ensembl1195,865,943 - 95,914,891 (-)Ensembl
RefSeq Acc Id: NM_008081   ⟹   NP_032107
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391195,754,385 - 95,805,697 (-)NCBI
GRCm381195,863,559 - 95,914,871 (-)NCBI
MGSCv371195,724,873 - 95,776,185 (-)RGD
Celera11105,505,852 - 105,557,155 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532201   ⟹   XP_006532264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391195,755,511 - 95,805,786 (-)NCBI
GRCm381195,864,685 - 95,914,960 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_032107   ⟸   NM_008081
- UniProtKB: Q09199 (UniProtKB/Swiss-Prot),   A2A615 (UniProtKB/TrEMBL),   F8VBU4 (UniProtKB/TrEMBL),   F8VBU5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532264   ⟸   XM_006532201
- Peptide Label: isoform X1
- UniProtKB: F8VBU5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000037239   ⟸   ENSMUST00000038343
Protein Domains
Glycosyltransferase 2-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q09199-F1-model_v2 AlphaFold Q09199 1-510 view protein structure

Promoters
RGD ID:6820462
Promoter ID:MM_KWN:9365
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000003500
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361195,775,846 - 95,776,346 (-)MPROMDB
RGD ID:8676300
Promoter ID:EPDNEW_M16181
Type:initiation region
Name:B4galnt2_1
Description:Mus musculus beta-1,4-N-acetyl-galactosaminyl transferase 2 ,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381195,914,891 - 95,914,951EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1342058 AgrOrtholog
Ensembl Genes ENSMUSG00000013418 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000038343 ENTREZGENE
  ENSMUST00000038343.7 UniProtKB/Swiss-Prot
InterPro Glyco_trans_2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GM2_synthase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14422 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1342058 ENTREZGENE
NCBI Gene 14422 ENTREZGENE
PANTHER BETA-1,4 N-ACETYLGALACTOSAMINYLTRANSFERASE 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glycos_transf_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen B4galnt2 PhenoGen
PIRSF GM2_GD2_synthase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2A615 ENTREZGENE, UniProtKB/TrEMBL
  B4GN2_MOUSE UniProtKB/Swiss-Prot
  F8VBU4 ENTREZGENE
  F8VBU5 ENTREZGENE
  Q09199 ENTREZGENE