1700016H13Rik (RIKEN cDNA 1700016H13 gene) - Rat Genome Database

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Gene: 1700016H13Rik (RIKEN cDNA 1700016H13 gene) Mus musculus
Analyze
Symbol: 1700016H13Rik
Name: RIKEN cDNA 1700016H13 gene
RGD ID: 1623161
MGI Page MGI
Description: Orthologous to human C4orf36 (chromosome 4 open reading frame 36).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC74218; uncharacterized protein C4orf36 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395103,796,449 - 103,803,898 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5103,795,905 - 103,803,876 (-)EnsemblGRCm39 Ensembl
GRCm385103,648,583 - 103,656,032 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5103,648,039 - 103,656,010 (-)EnsemblGRCm38mm10GRCm38
MGSCv375104,077,606 - 104,084,751 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365103,888,895 - 103,896,034 (-)NCBIMGSCv36mm8
Celera5100,952,801 - 100,959,912 (-)NCBICelera
Cytogenetic Map5E5NCBI
cM Map550.45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:21677750  


Genomics

Comparative Map Data
1700016H13Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395103,796,449 - 103,803,898 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5103,795,905 - 103,803,876 (-)EnsemblGRCm39 Ensembl
GRCm385103,648,583 - 103,656,032 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5103,648,039 - 103,656,010 (-)EnsemblGRCm38mm10GRCm38
MGSCv375104,077,606 - 104,084,751 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365103,888,895 - 103,896,034 (-)NCBIMGSCv36mm8
Celera5100,952,801 - 100,959,912 (-)NCBICelera
Cytogenetic Map5E5NCBI
cM Map550.45NCBI
C4orf36
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38486,876,205 - 86,936,204 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl486,876,205 - 86,892,422 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl486,886,472 - 86,936,178 (-)EnsemblGRCh38hg38GRCh38
GRCh37487,797,358 - 87,813,575 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36488,016,382 - 88,032,599 (-)NCBINCBI36Build 36hg18NCBI36
Celera485,086,805 - 85,103,009 (-)NCBICelera
Cytogenetic Map4q21.3NCBI
HuRef483,542,250 - 83,558,464 (-)NCBIHuRef
CHM1_1487,773,837 - 87,791,111 (-)NCBICHM1_1
T2T-CHM13v2.0490,205,627 - 90,265,613 (-)NCBIT2T-CHM13v2.0
C14h4orf36
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8146,363,170 - 6,370,479 (+)NCBIGRCr8
mRatBN7.2146,058,581 - 6,065,848 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl146,058,581 - 6,065,847 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx146,027,730 - 6,035,036 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0147,327,981 - 7,335,287 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0146,025,792 - 6,033,122 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0147,581,189 - 7,636,823 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl147,581,189 - 7,636,822 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0147,609,873 - 7,611,192 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0147,559,461 - 7,560,448 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4147,222,291 - 7,230,296 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera146,198,302 - 6,205,552 (+)NCBICelera
Cytogenetic Map14p22NCBI
CUNH4orf36
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554742,935,017 - 2,937,271 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554742,934,400 - 2,939,999 (+)NCBIChiLan1.0ChiLan1.0
C3H4orf36
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2384,904,151 - 84,911,161 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1485,161,252 - 85,173,171 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0479,191,018 - 79,239,311 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1489,909,051 - 89,926,449 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl489,919,937 - 89,926,449 (-)Ensemblpanpan1.1panPan2
C32H4orf36
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13210,362,183 - 10,392,017 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3210,335,528 - 10,392,170 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3231,561,722 - 31,591,907 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03210,385,295 - 10,415,528 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3210,383,815 - 10,415,103 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13210,496,529 - 10,526,692 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03210,323,275 - 10,353,633 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03229,601,240 - 29,631,627 (+)NCBIUU_Cfam_GSD_1.0
CUNH4orf36
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405285279,480 - 320,776 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936920263,286 - 266,665 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936920263,257 - 266,769 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C8H4orf36
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8131,969,291 - 131,976,753 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18131,969,371 - 132,023,739 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28141,244,386 - 141,288,918 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH4orf36
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1735,257,412 - 35,263,122 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl735,254,501 - 35,262,261 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603713,952,304 - 13,957,598 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CUNH4orf36
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248723,455,986 - 3,459,545 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248723,455,943 - 3,459,549 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in 1700016H13Rik
275 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:801
Count of miRNA genes:317
Interacting mature miRNAs:342
Transcripts:ENSMUST00000031261, ENSMUST00000119824, ENSMUST00000120108, ENSMUST00000120688, ENSMUST00000134926, ENSMUST00000154096, ENSMUST00000154408
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
10043993Hbnr10_mHeligmosomoides bakeri nematode resistance 10 (mouse)Not determined572418876106419011Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575315348120018629Mouse
4141438Skmw13_mskeletal muscle weight 13 (mouse)Not determined576190263110190479Mouse
4141505Chlq14_mcirculating hormone level QTL 14 (mouse)Not determined576280786110280917Mouse
1300986Hdlq2_mHDL QTL 2 (mouse)Not determined576280786110280917Mouse
1301691Cdcs10_mcytokine deficiency colitis susceptibility 10 (mouse)Not determined576280786110280917Mouse
1301829Thyls2_mthymic lymphoma susceptibility 2 (mouse)Not determined576445064110445225Mouse
1301713Dbsty2_mdiabesity 2 (mouse)Not determined576445064110445225Mouse
13464249Ahl16_mage related hearing loss, early onset 16 (mouse)576445064110445225Mouse
1300931Cocrb6_mcocaine related behavior 6 (mouse)Not determined576445064110445225Mouse
10401246Bglu13_mblood glucose level 13 (mouse)Not determined579539640113539786Mouse
10755524Mono1_mmonocyte differential 1 (mouse)580849259114849259Mouse
1301419Cypr3_mcytokine production 3 (mouse)Not determined581019649115019803Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582838468116838597Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582838468116838597Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595434580129434786Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595465549129465722Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595465549129465722Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595465549129465722Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596320385130320533Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined597021753131021986Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined597021753131021986Mouse
10045978Tir10_mtrypanosome infection response 10 (mouse)Not determined598019649114021986Mouse
1301042Elmaz1_melevated maze behavior 1 (mouse)Not determined598019649116876624Mouse
1301877Bbaa3_mB.burgdorferi-associated arthritis 3 (mouse)Not determined599455285112465722Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99949422126882944Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100665965134665965Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100665965134665965Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101332579135332579Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101863832135864028Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102945037136945196Mouse
25314310Syncl4_msynaptonemal complex length 4 (mouse)5103047866115538059Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000031261   ⟹   ENSMUSP00000031261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5103,796,453 - 103,803,589 (-)Ensembl
GRCm38.p6 Ensembl5103,648,587 - 103,655,723 (-)Ensembl
RefSeq Acc Id: ENSMUST00000119824   ⟹   ENSMUSP00000113935
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5103,795,905 - 103,803,876 (-)Ensembl
GRCm38.p6 Ensembl5103,648,039 - 103,656,010 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120108   ⟹   ENSMUSP00000113969
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5103,796,459 - 103,803,614 (-)Ensembl
GRCm38.p6 Ensembl5103,648,593 - 103,655,748 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120688   ⟹   ENSMUSP00000113469
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5103,796,637 - 103,803,589 (-)Ensembl
GRCm38.p6 Ensembl5103,648,771 - 103,655,723 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134926   ⟹   ENSMUSP00000114503
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5103,796,295 - 103,803,598 (-)Ensembl
GRCm38.p6 Ensembl5103,648,429 - 103,655,732 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154096   ⟹   ENSMUSP00000118111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5103,796,637 - 103,803,590 (-)Ensembl
GRCm38.p6 Ensembl5103,648,771 - 103,655,724 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154408   ⟹   ENSMUSP00000122224
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5103,796,564 - 103,803,589 (-)Ensembl
GRCm38.p6 Ensembl5103,648,698 - 103,655,723 (-)Ensembl
RefSeq Acc Id: NM_001163550   ⟹   NP_001157022
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,453 - 103,803,598 (-)NCBI
GRCm385103,648,587 - 103,655,732 (-)NCBI
MGSCv375104,077,606 - 104,084,751 (-)RGD
Celera5100,952,801 - 100,959,912 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_028824   ⟹   NP_083100
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,453 - 103,803,590 (-)NCBI
GRCm385103,648,587 - 103,655,724 (-)NCBI
MGSCv375104,077,606 - 104,084,751 (-)RGD
Celera5100,952,801 - 100,959,912 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006535258   ⟹   XP_006535321
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,449 - 103,803,618 (-)NCBI
GRCm385103,648,583 - 103,655,752 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006535260   ⟹   XP_006535323
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,449 - 103,803,304 (-)NCBI
GRCm385103,648,583 - 103,655,438 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006535261   ⟹   XP_006535324
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,449 - 103,803,898 (-)NCBI
GRCm385103,648,583 - 103,656,032 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249580   ⟹   XP_011247882
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,449 - 103,803,168 (-)NCBI
GRCm385103,648,583 - 103,655,302 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249581   ⟹   XP_011247883
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,449 - 103,803,304 (-)NCBI
GRCm385103,648,583 - 103,655,438 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249582   ⟹   XP_011247884
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,449 - 103,803,898 (-)NCBI
GRCm385103,648,583 - 103,656,032 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321121   ⟹   XP_017176610
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,796,449 - 103,803,304 (-)NCBI
GRCm385103,648,583 - 103,655,438 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001157022   ⟸   NM_001163550
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_083100   ⟸   NM_028824
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535324   ⟸   XM_006535261
- Peptide Label: isoform X1
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535321   ⟸   XM_006535258
- Peptide Label: isoform X1
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535323   ⟸   XM_006535260
- Peptide Label: isoform X1
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247884   ⟸   XM_011249582
- Peptide Label: isoform X1
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247883   ⟸   XM_011249581
- Peptide Label: isoform X1
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247882   ⟸   XM_011249580
- Peptide Label: isoform X1
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017176610   ⟸   XM_017321121
- Peptide Label: isoform X1
- UniProtKB: Q9DAA3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000113935   ⟸   ENSMUST00000119824
RefSeq Acc Id: ENSMUSP00000031261   ⟸   ENSMUST00000031261
RefSeq Acc Id: ENSMUSP00000122224   ⟸   ENSMUST00000154408
RefSeq Acc Id: ENSMUSP00000114503   ⟸   ENSMUST00000134926
RefSeq Acc Id: ENSMUSP00000118111   ⟸   ENSMUST00000154096
RefSeq Acc Id: ENSMUSP00000113469   ⟸   ENSMUST00000120688
RefSeq Acc Id: ENSMUSP00000113969   ⟸   ENSMUST00000120108

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DAA3-F1-model_v2 AlphaFold Q9DAA3 1-117 view protein structure

Promoters
RGD ID:6887324
Promoter ID:EPDNEW_M7113
Type:multiple initiation site
Name:1700016H13Rik_1
Description:Mus musculus RIKEN cDNA 1700016H13 gene , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385103,655,728 - 103,655,788EPDNEW
RGD ID:6836752
Promoter ID:MM_KWN:43131
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   ES_Cell,   Lung
Transcripts:ENSMUST00000119824,   ENSMUST00000120108,   ENSMUST00000120688,   OTTMUST00000072648,   OTTMUST00000072652,   OTTMUST00000072653,   UC008YJQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365104,084,354 - 104,084,854 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921468 AgrOrtholog
Ensembl Genes ENSMUSG00000029320 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000031261.11 UniProtKB/TrEMBL
  ENSMUST00000119824 ENTREZGENE
  ENSMUST00000119824.8 UniProtKB/Swiss-Prot
  ENSMUST00000120108 ENTREZGENE
  ENSMUST00000120108.8 UniProtKB/Swiss-Prot
  ENSMUST00000120688 ENTREZGENE
  ENSMUST00000120688.6 UniProtKB/Swiss-Prot
  ENSMUST00000134926 ENTREZGENE
  ENSMUST00000134926.8 UniProtKB/Swiss-Prot
  ENSMUST00000154096.4 UniProtKB/TrEMBL
  ENSMUST00000154408.8 UniProtKB/TrEMBL
InterPro DUF4522 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:74218 UniProtKB/Swiss-Prot
MGD MGI:1921468 ENTREZGENE
NCBI Gene 74218 ENTREZGENE
PANTHER CHROMOSOME 4 C4ORF36 HOMOLOG UniProtKB/Swiss-Prot
  PTHR38002 UniProtKB/Swiss-Prot
Pfam DUF4522 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen 1700016H13Rik PhenoGen
UniProt CD036_MOUSE UniProtKB/Swiss-Prot
  Q810Q2_MOUSE UniProtKB/TrEMBL
  Q9DAA3 ENTREZGENE