Gfpt2 (glutamine fructose-6-phosphate transaminase 2) - Rat Genome Database

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Gene: Gfpt2 (glutamine fructose-6-phosphate transaminase 2) Mus musculus
Analyze
Symbol: Gfpt2
Name: glutamine fructose-6-phosphate transaminase 2
RGD ID: 1622399
MGI Page MGI
Description: Predicted to enable glutamine-fructose-6-phosphate transaminase (isomerizing) activity. Acts upstream of or within cellular response to leukemia inhibitory factor. Is expressed in craniocervical region bone; naris; and sternum. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human GFPT2 (glutamine-fructose-6-phosphate transaminase 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI480523; D-fructose-6-phosphate amidotransferase 2; GFAT; GFAT 2; GFAT2; glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2; glutamine:fructose 6 phosphate amidotransferase 2; glutamine:fructose-6-phosphate amidotransferase 2; hexosephosphate aminotransferase 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391149,684,981 - 49,729,448 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1149,685,005 - 49,729,440 (+)EnsemblGRCm39 Ensembl
GRCm381149,794,155 - 49,838,620 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1149,794,178 - 49,838,613 (+)EnsemblGRCm38mm10GRCm38
MGSCv371149,607,657 - 49,652,122 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361149,637,612 - 49,682,036 (+)NCBIMGSCv36mm8
Celera1154,356,266 - 54,400,730 (+)NCBICelera
Cytogenetic Map11B1.2NCBI
cM Map1129.9NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-di-tert-butyl-4-methylphenol  (EXP)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
acrylamide  (EXP,ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ampicillin  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP,ISO)
CGP 52608  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
clobetasol  (EXP)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP,ISO)
dexamethasone  (ISO)
dextran sulfate  (EXP)
dioxygen  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
fulvestrant  (ISO)
furan  (ISO)
gentamycin  (ISO)
Indeno[1,2,3-cd]pyrene  (EXP)
indometacin  (ISO)
isoprenaline  (EXP)
ketamine  (ISO)
Licochalcone B  (ISO)
lipopolysaccharide  (ISO)
methylparaben  (ISO)
metronidazole  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
neomycin  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
O-methyleugenol  (ISO)
ozone  (EXP,ISO)
paraquat  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
rac-lactic acid  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Common variants in glutamine:fructose-6-phosphate amidotransferase 2 (GFPT2) gene are associated with type 2 diabetes, diabetic nephropathy, and increased GFPT2 mRNA levels. Zhang H, etal., J Clin Endocrinol Metab. 2004 Feb;89(2):748-55.
Additional References at PubMed
PMID:9060444   PMID:10198162   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11167021   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273  
PMID:14681479   PMID:15133036   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16373690   PMID:16429160   PMID:17967808   PMID:18799693   PMID:20439489   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:27626380   PMID:30228991   PMID:30254013   PMID:30457570   PMID:30550785   PMID:32978282  


Genomics

Comparative Map Data
Gfpt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391149,684,981 - 49,729,448 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1149,685,005 - 49,729,440 (+)EnsemblGRCm39 Ensembl
GRCm381149,794,155 - 49,838,620 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1149,794,178 - 49,838,613 (+)EnsemblGRCm38mm10GRCm38
MGSCv371149,607,657 - 49,652,122 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361149,637,612 - 49,682,036 (+)NCBIMGSCv36mm8
Celera1154,356,266 - 54,400,730 (+)NCBICelera
Cytogenetic Map11B1.2NCBI
cM Map1129.9NCBI
GFPT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385180,300,698 - 180,353,336 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5180,300,698 - 180,353,336 (-)EnsemblGRCh38hg38GRCh38
GRCh375179,727,698 - 179,780,336 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365179,660,306 - 179,712,921 (-)NCBINCBI36Build 36hg18NCBI36
Build 345179,660,305 - 179,712,921NCBI
Celera5175,353,585 - 175,406,149 (-)NCBICelera
Cytogenetic Map5q35.3NCBI
HuRef5174,452,687 - 174,505,224 (-)NCBIHuRef
CHM1_15179,160,010 - 179,212,604 (-)NCBICHM1_1
T2T-CHM13v2.05180,856,156 - 180,908,788 (-)NCBIT2T-CHM13v2.0
Gfpt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81034,616,146 - 34,662,420 (+)NCBIGRCr8
mRatBN7.21034,115,005 - 34,161,329 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1034,115,052 - 34,161,329 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1038,790,597 - 38,836,668 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0107,329,012 - 7,375,083 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01033,784,262 - 33,830,334 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01035,279,237 - 35,325,506 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1035,279,236 - 35,325,508 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01035,051,132 - 35,097,280 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41035,290,139 - 35,336,286 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11035,291,187 - 35,337,335 (+)NCBI
Celera1033,471,073 - 33,517,016 (+)NCBICelera
Cytogenetic Map10q21NCBI
Gfpt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955408330,112 - 372,413 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955408330,112 - 372,413 (+)NCBIChiLan1.0ChiLan1.0
GFPT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24175,323,496 - 175,378,253 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15173,487,562 - 173,542,333 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05175,504,272 - 175,558,610 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15182,815,725 - 182,869,823 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5182,815,719 - 182,869,823 (-)Ensemblpanpan1.1panPan2
GFPT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1111,378,275 - 1,419,643 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl111,378,336 - 1,419,653 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha111,440,563 - 1,481,926 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0111,349,822 - 1,391,200 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl111,349,855 - 1,391,191 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1111,302,674 - 1,344,040 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0111,400,733 - 1,442,090 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0111,640,780 - 1,682,142 (+)NCBIUU_Cfam_GSD_1.0
Gfpt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213119,283,259 - 119,333,923 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936739493,060 - 543,702 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936739493,082 - 543,700 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GFPT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl278,285,203 - 78,328,285 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1278,285,208 - 78,328,288 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2279,770,248 - 79,813,317 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GFPT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12382,035,258 - 82,086,201 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2382,034,854 - 82,071,828 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607513,422,000 - 13,475,977 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gfpt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473343,058,156 - 43,089,508 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473343,057,319 - 43,103,568 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gfpt2
1148 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:735
Count of miRNA genes:418
Interacting mature miRNAs:480
Transcripts:ENSMUST00000020629, ENSMUST00000130129
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113776858060402716Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
10053675Eae44b_mexperimental allergic encephalomyelitis susceptibility 44b (mouse)Not determined113995072854094448Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
1300713Vmbic10_mventral midbrain iron content 10 (mouse)Not determined114277262654081064Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
13452402Hipmt3_mhippocampal morphometry trait 3 (mouse)114797732550277325Mouse

Markers in Region
AI480523  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381149,838,447 - 49,838,576UniSTSGRCm38
MGSCv371149,651,949 - 49,652,078UniSTSGRCm37
Celera1154,400,557 - 54,400,686UniSTS
Cytogenetic Map11B1.2UniSTS
Whitehead/MRC_RH11683.61UniSTS
D11Mit153  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381149,822,001 - 49,822,176UniSTSGRCm38
MGSCv371149,635,503 - 49,635,678UniSTSGRCm37
Celera1154,384,110 - 54,384,285UniSTS
Cytogenetic Map11B1.2UniSTS
cM Map1127.0UniSTS
Whitehead Genetic1124.0UniSTS
Whitehead/MRC_RH11683.61UniSTS
Whitehead_YAC11 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_013529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB016778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB016779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB016780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB038999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL606479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE198515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM204562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ163487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS538840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS600923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS606415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS607365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DY247913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GM751770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GM840936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000020629   ⟹   ENSMUSP00000020629
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,685,014 - 49,729,440 (+)Ensembl
GRCm38.p6 Ensembl1149,794,187 - 49,838,613 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130129
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,685,005 - 49,698,577 (+)Ensembl
GRCm38.p6 Ensembl1149,794,178 - 49,807,750 (+)Ensembl
RefSeq Acc Id: NM_013529   ⟹   NP_038557
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,684,982 - 49,729,447 (+)NCBI
GRCm381149,794,155 - 49,838,620 (+)ENTREZGENE
MGSCv371149,607,657 - 49,652,122 (+)RGD
Celera1154,356,266 - 54,400,730 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036156336   ⟹   XP_036012229
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,685,495 - 49,729,448 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156337   ⟹   XP_036012230
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,684,981 - 49,715,630 (+)NCBI
Sequence:
RefSeq Acc Id: NP_038557   ⟸   NM_013529
- UniProtKB: Q5NCL2 (UniProtKB/Swiss-Prot),   Q9Z2Z9 (UniProtKB/Swiss-Prot),   Q3V0X4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000020629   ⟸   ENSMUST00000020629
RefSeq Acc Id: XP_036012230   ⟸   XM_036156337
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036012229   ⟸   XM_036156336
- Peptide Label: isoform X1
- UniProtKB: Q3V0X4 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z2Z9-F1-model_v2 AlphaFold Q9Z2Z9 1-682 view protein structure

Promoters
RGD ID:6820933
Promoter ID:MM_KWN:7207
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   Brain,   ES_Cell,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_013529,   OTTMUST00000012377,   UC007IRC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361149,607,539 - 49,608,039 (+)MPROMDB
RGD ID:8674484
Promoter ID:EPDNEW_M15272
Type:multiple initiation site
Name:Gfpt2_1
Description:Mus musculus glutamine fructose-6-phosphate transaminase 2 ,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381149,794,178 - 49,794,238EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1338883 AgrOrtholog
Ensembl Genes ENSMUSG00000020363 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000020629 ENTREZGENE
  ENSMUST00000020629.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.60.20.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GATase_2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GFAT_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GlmS/AgaS_SIS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GlmS/FrlB_SIS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GlmS_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ntn_hydrolases_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SIS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SIS_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14584 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1338883 ENTREZGENE
NCBI Gene 14584 ENTREZGENE
PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GATase_6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SIS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gfpt2 PhenoGen
PROSITE GATASE_TYPE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SIS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53697 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56235 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt GFPT2_MOUSE UniProtKB/Swiss-Prot
  Q3V0X4 ENTREZGENE, UniProtKB/TrEMBL
  Q5NCL2 ENTREZGENE
  Q9Z2Z9 ENTREZGENE
UniProt Secondary Q5NCL2 UniProtKB/Swiss-Prot