Macir (macrophage immunometabolism regulator) - Rat Genome Database

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Gene: Macir (macrophage immunometabolism regulator) Mus musculus
Analyze
Symbol: Macir
Name: macrophage immunometabolism regulator
RGD ID: 1621563
MGI Page MGI
Description: Acts upstream of or within negative regulation of cytokine production involved in inflammatory response; negative regulation of epithelial cell migration; and negative regulation of fibroblast migration. Predicted to be located in ciliary transition zone and cytoplasm. Is expressed in several structures, including alimentary system; brain; eye; genitourinary system; and hemolymphoid system. Orthologous to human MACIR (macrophage immunometabolism regulator).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI987691; AW047450; D1Ertd622; D1Ertd622e; DNA segment, Chr 1, ERATO Doi 622, expressed; hypothetical protein LOC52392; UNC119-binding protein C5orf30 homolog; UPF0684 protein C5orf30 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm14608  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39197,571,627 - 97,589,743 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl197,534,043 - 97,589,799 (-)EnsemblGRCm39 Ensembl
GRCm38197,643,902 - 97,662,018 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl197,606,318 - 97,662,074 (-)EnsemblGRCm38mm10GRCm38
MGSCv37199,540,479 - 99,558,595 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36199,474,309 - 99,492,382 (-)NCBIMGSCv36mm8
Celera1100,523,076 - 100,541,194 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map147.76NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15163632  
PMID:16141072   PMID:16141073   PMID:21677750   PMID:21873635   PMID:24194600   PMID:26316022   PMID:27626380  


Genomics

Comparative Map Data
Macir
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39197,571,627 - 97,589,743 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl197,534,043 - 97,589,799 (-)EnsemblGRCm39 Ensembl
GRCm38197,643,902 - 97,662,018 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl197,606,318 - 97,662,074 (-)EnsemblGRCm38mm10GRCm38
MGSCv37199,540,479 - 99,558,595 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36199,474,309 - 99,492,382 (-)NCBIMGSCv36mm8
Celera1100,523,076 - 100,541,194 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map147.76NCBI
MACIR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385103,258,374 - 103,278,660 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5103,258,763 - 103,278,660 (+)EnsemblGRCh38hg38GRCh38
GRCh375102,594,075 - 102,614,361 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365102,622,341 - 102,642,260 (+)NCBINCBI36Build 36hg18NCBI36
Celera598,542,288 - 98,562,209 (+)NCBICelera
Cytogenetic Map5q21.1NCBI
HuRef597,775,822 - 97,795,742 (+)NCBIHuRef
CHM1_15102,027,108 - 102,047,027 (+)NCBICHM1_1
T2T-CHM13v2.05103,766,495 - 103,786,818 (+)NCBIT2T-CHM13v2.0
Macir
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89105,868,072 - 105,888,128 (+)NCBIGRCr8
mRatBN7.2998,420,760 - 98,440,818 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl998,420,376 - 98,441,733 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9106,834,539 - 106,854,561 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09111,962,313 - 111,982,335 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09110,305,924 - 110,325,948 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09111,327,333 - 111,347,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9111,327,402 - 111,347,430 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.09110,878,815 - 110,898,589 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4997,216,277 - 97,236,238 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera995,862,440 - 95,882,884 (+)NCBICelera
Cytogenetic Map9q36NCBI
Macir
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541810,752,250 - 10,767,791 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541810,752,250 - 10,767,791 (-)NCBIChiLan1.0ChiLan1.0
MACIR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2498,541,893 - 98,561,641 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1596,695,534 - 96,715,289 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0598,612,892 - 98,632,854 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15104,313,494 - 104,332,681 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5104,330,232 - 104,330,852 (+)Ensemblpanpan1.1panPan2
MACIR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.137,956,865 - 7,968,964 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha39,358,340 - 9,377,572 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.037,844,435 - 7,863,767 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl37,844,463 - 7,862,952 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.137,785,357 - 7,804,615 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.037,805,599 - 7,823,519 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.037,964,146 - 7,983,424 (-)NCBIUU_Cfam_GSD_1.0
Macir
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213163,088,172 - 163,107,524 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365231,275,214 - 1,292,854 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365231,273,812 - 1,292,837 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MACIR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2108,733,357 - 108,753,275 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12108,733,347 - 108,753,276 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22112,804,239 - 112,822,920 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MACIR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1236,695,131 - 6,714,925 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl236,712,171 - 6,712,791 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660367,609,545 - 7,629,192 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Macir
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474321,372,278 - 21,387,871 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474321,372,253 - 21,389,202 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Macir
566 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1656
Count of miRNA genes:438
Interacting mature miRNAs:511
Transcripts:ENSMUST00000053033, ENSMUST00000142234, ENSMUST00000149927, ENSMUST00000153115
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162946755120529678Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
1302146Cocrb1_mcocaine related behavior 1 (mouse)Not determined170133533104139557Mouse
1300976Bmd19_mbone mineral density 19 (mouse)Not determined173266214108838414Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
1301304Hrq3_mheart rate quantitative locus 3 (mouse)Not determined173615692107615830Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)175976637128527737Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177123115110536075Mouse
4141725Wbcq4_mwhite blood cell quantitative locus 4 (mouse)Not determined179858683113858791Mouse
12050069Nabq1_mnasal bone morphology QTL 1 (mouse)179858683113858791Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180245593126386517Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182643189135615379Mouse
10412238Alpq5_malcohol preference QTL 5 (mouse)Not determined182832635116832635Mouse
12791004Aath7_maortic arch atherosclerosis 7 (mouse)182832635116832635Mouse
11667074Led2_mlate embryonic death 2 (mouse)185696027117195081Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186483929120483929Mouse
4141329Mleu1_mmyeloid leukemia survival 1 (mouse)Not determined89786512123786512Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189786512123786512Mouse
4141347Reb1_mrepetitive behavior 1 (mouse)Not determined91468266100413667Mouse
1357760Synch3_msynechia 3 (mouse)Not determined192901442126901550Mouse
4141627Bwq7_mbody weight, QTL 7 (mouse)Not determined192940909124497796Mouse
12879491Hfnq1_mhair follicle number QTL 1 (mouse)193310310123636759Mouse
10045976Tir6_mtrypanosome infection response 6 (mouse)Not determined193536855120529678Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194127725148775742Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
1301123Cd8mts2_mCD8 memory T cell subset 2 (mouse)Not determined196618386130618557Mouse
1301753Tir3a_mtrypansomiasis infection response 3a (mouse)Not determined197053986131054190Mouse

Markers in Region
RH118244  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38197,644,380 - 97,644,542UniSTSGRCm38
MGSCv37199,540,957 - 99,541,119UniSTSGRCm37
Celera1100,523,554 - 100,523,716UniSTS
Cytogenetic Map1DUniSTS
cM Map160.2UniSTS
Whitehead/MRC_RH11337.93UniSTS
Whitehead_YAC1 UniSTS
AW047450  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38197,644,647 - 97,644,726UniSTSGRCm38
MGSCv37199,541,224 - 99,541,303UniSTSGRCm37
Celera1100,523,821 - 100,523,900UniSTS
Cytogenetic Map1DUniSTS
cM Map160.2UniSTS
AI987691  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38197,645,322 - 97,645,452UniSTSGRCm38
MGSCv37199,541,899 - 99,542,029UniSTSGRCm37
Celera1100,524,496 - 100,524,626UniSTS
Cytogenetic Map1DUniSTS
cM Map160.2UniSTS
Whitehead/MRC_RH11340.77UniSTS
D1Ertd622e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38197,644,038 - 97,644,256UniSTSGRCm38
MGSCv37199,540,615 - 99,540,833UniSTSGRCm37
Celera1100,523,212 - 100,523,430UniSTS
Cytogenetic Map1DUniSTS
cM Map160.2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC099860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB611324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY419889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000053033   ⟹   ENSMUSP00000051034
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl197,534,043 - 97,589,799 (-)Ensembl
GRCm38.p6 Ensembl197,606,318 - 97,662,074 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142234   ⟹   ENSMUSP00000137803
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl197,573,660 - 97,589,401 (-)Ensembl
GRCm38.p6 Ensembl197,645,935 - 97,661,676 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149927   ⟹   ENSMUSP00000121997
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl197,571,628 - 97,589,799 (-)Ensembl
GRCm38.p6 Ensembl197,643,903 - 97,662,074 (-)Ensembl
RefSeq Acc Id: ENSMUST00000153115   ⟹   ENSMUSP00000138031
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl197,571,628 - 97,589,401 (-)Ensembl
GRCm38.p6 Ensembl197,643,903 - 97,661,676 (-)Ensembl
RefSeq Acc Id: NM_001355071   ⟹   NP_001342000
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39197,571,627 - 97,589,743 (-)NCBI
GRCm38197,643,902 - 97,662,018 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001355072   ⟹   NP_001342001
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39197,571,627 - 97,589,401 (-)NCBI
GRCm38197,643,902 - 97,661,676 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001355073   ⟹   NP_001342002
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39197,571,627 - 97,589,401 (-)NCBI
GRCm38197,643,902 - 97,661,676 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001355074   ⟹   NP_001342003
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39197,571,627 - 97,589,401 (-)NCBI
GRCm38197,643,902 - 97,661,676 (-)NCBI
Sequence:
RefSeq Acc Id: NM_133825   ⟹   NP_598586
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39197,571,627 - 97,589,743 (-)NCBI
GRCm38197,643,902 - 97,662,018 (-)ENTREZGENE
MGSCv37199,540,479 - 99,558,595 (-)RGD
Celera1100,523,076 - 100,541,194 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529751   ⟹   XP_006529814
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39197,571,628 - 97,589,247 (-)NCBI
GRCm38197,643,903 - 97,661,522 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_598586   ⟸   NM_133825
- UniProtKB: Q3UXG2 (UniProtKB/Swiss-Prot),   Q8VEB3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529814   ⟸   XM_006529751
- Peptide Label: isoform X1
- UniProtKB: Q3UXG2 (UniProtKB/Swiss-Prot),   Q8VEB3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001342000   ⟸   NM_001355071
- UniProtKB: Q8VEB3 (UniProtKB/Swiss-Prot),   Q3UXG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001342003   ⟸   NM_001355074
- UniProtKB: Q8VEB3 (UniProtKB/Swiss-Prot),   Q3UXG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001342002   ⟸   NM_001355073
- UniProtKB: Q8VEB3 (UniProtKB/Swiss-Prot),   Q3UXG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001342001   ⟸   NM_001355072
- UniProtKB: Q8VEB3 (UniProtKB/Swiss-Prot),   Q3UXG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000051034   ⟸   ENSMUST00000053033
RefSeq Acc Id: ENSMUSP00000121997   ⟸   ENSMUST00000149927
RefSeq Acc Id: ENSMUSP00000138031   ⟸   ENSMUST00000153115
RefSeq Acc Id: ENSMUSP00000137803   ⟸   ENSMUST00000142234

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VEB3-F1-model_v2 AlphaFold Q8VEB3 1-207 view protein structure

Promoters
RGD ID:6874602
Promoter ID:EPDNEW_M752
Type:multiple initiation site
Name:D1Ertd622e_3
Description:Mus musculus DNA segment, Chr 1, ERATO Doi 622, expressed , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M753  EPDNEW_M754  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38197,661,027 - 97,661,087EPDNEW
RGD ID:6874604
Promoter ID:EPDNEW_M753
Type:initiation region
Name:D1Ertd622e_2
Description:Mus musculus DNA segment, Chr 1, ERATO Doi 622, expressed , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M752  EPDNEW_M754  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38197,661,681 - 97,661,741EPDNEW
RGD ID:6874606
Promoter ID:EPDNEW_M754
Type:initiation region
Name:D1Ertd622e_1
Description:Mus musculus DNA segment, Chr 1, ERATO Doi 622, expressed , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M752  EPDNEW_M753  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38197,661,963 - 97,662,023EPDNEW
RGD ID:6817582
Promoter ID:MM_KWN:1747
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000053033,   OTTMUST00000051671,   OTTMUST00000051672,   OTTMUST00000051673
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36199,557,761 - 99,558,812 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1277184 AgrOrtholog
Ensembl Genes ENSMUSG00000044768 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000053033 ENTREZGENE
  ENSMUST00000053033.14 UniProtKB/Swiss-Prot
  ENSMUST00000142234.2 UniProtKB/TrEMBL
  ENSMUST00000149927 ENTREZGENE
  ENSMUST00000149927.2 UniProtKB/Swiss-Prot
  ENSMUST00000153115 ENTREZGENE
  ENSMUST00000153115.8 UniProtKB/Swiss-Prot
InterPro UNC119-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:52392 UniProtKB/Swiss-Prot
MGD MGI:1277184 ENTREZGENE
NCBI Gene 52392 ENTREZGENE
PANTHER MACROPHAGE IMMUNOMETABOLISM REGULATOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR31224 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam UNC119_bdg UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Macir PhenoGen
UniProt CE030_MOUSE UniProtKB/Swiss-Prot
  M0QWF6_MOUSE UniProtKB/TrEMBL
  Q3UXG2 ENTREZGENE
  Q8VEB3 ENTREZGENE
UniProt Secondary Q3UXG2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-25 Macir  macrophage immunometabolism regulator  D1Ertd622e  DNA segment, Chr 1, ERATO Doi 622, expressed  Symbol and/or name change 5135510 APPROVED